BLASTX nr result
ID: Panax24_contig00037516
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax24_contig00037516
(424 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CAN65377.1 hypothetical protein VITISV_014188 [Vitis vinifera] 186 4e-62
CAN64779.1 hypothetical protein VITISV_043230 [Vitis vinifera] 184 2e-61
CAN76284.1 hypothetical protein VITISV_041019 [Vitis vinifera] 181 1e-58
CAN59755.1 hypothetical protein VITISV_034567 [Vitis vinifera] 156 1e-51
KYP34090.1 Retrovirus-related Pol polyprotein from transposon TN... 154 3e-49
CAN67797.1 hypothetical protein VITISV_038915 [Vitis vinifera] 142 4e-48
CAN64172.1 hypothetical protein VITISV_041386 [Vitis vinifera] 145 3e-47
CAN77177.1 hypothetical protein VITISV_021789 [Vitis vinifera] 164 4e-46
CAN69956.1 hypothetical protein VITISV_032883 [Vitis vinifera] 138 6e-44
CAN77916.1 hypothetical protein VITISV_031396 [Vitis vinifera] 159 1e-42
KYP62303.1 Retrovirus-related Pol polyprotein from transposon TN... 144 2e-40
KYP38814.1 Retrovirus-related Pol polyprotein from transposon TN... 125 2e-39
CAN63433.1 hypothetical protein VITISV_033829 [Vitis vinifera] 116 2e-39
KYP36206.1 Retrovirus-related Pol polyprotein from transposon TN... 123 5e-39
KYP70533.1 Retrovirus-related Pol polyprotein from transposon TN... 122 1e-38
KYP61490.1 Retrovirus-related Pol polyprotein from transposon TN... 121 4e-38
KYP46287.1 Retrovirus-related Pol polyprotein from transposon TN... 121 4e-38
KYP68556.1 Retrovirus-related Pol polyprotein from transposon TN... 119 9e-38
OMO54668.1 Zinc finger, CCHC-type [Corchorus capsularis] 121 6e-37
KYP64079.1 Retrovirus-related Pol polyprotein from transposon TN... 137 1e-36
>CAN65377.1 hypothetical protein VITISV_014188 [Vitis vinifera]
Length = 738
Score = 186 bits (473), Expect(2) = 4e-62
Identities = 91/106 (85%), Positives = 95/106 (89%), Gaps = 6/106 (5%)
Frame = +1
Query: 115 IFLLNRLPIKALQQKTPFE------PRLQNLKTFGCLCFSYIPHVKRDKLDKKAEAGIFI 276
+FLLNRLP KALQQKTPFE PRLQNLKTFGCLCFSYIPHVKRDKLDKKAEAGIFI
Sbjct: 106 VFLLNRLPTKALQQKTPFEAWYDYKPRLQNLKTFGCLCFSYIPHVKRDKLDKKAEAGIFI 165
Query: 277 GYSSISKAYRIYLPENNKVIASRDVKFFESESWNWEKDNKLEFQKD 414
GYSSISKAYRIYLPENNKVI SRDVKFFE ESW+WE D KLEFQ++
Sbjct: 166 GYSSISKAYRIYLPENNKVIVSRDVKFFELESWSWENDKKLEFQEE 211
Score = 79.3 bits (194), Expect(2) = 4e-62
Identities = 36/40 (90%), Positives = 37/40 (92%)
Frame = +3
Query: 3 TPQQNGVVERKNRTLMEMTRCLLHDKRLPKKFWGEAAHIS 122
TPQQNGVVERKNRTLMEMTRCLLH+K LPKKFW EAAH S
Sbjct: 66 TPQQNGVVERKNRTLMEMTRCLLHEKGLPKKFWAEAAHTS 105
>CAN64779.1 hypothetical protein VITISV_043230 [Vitis vinifera]
Length = 1102
Score = 184 bits (466), Expect(2) = 2e-61
Identities = 90/106 (84%), Positives = 94/106 (88%), Gaps = 6/106 (5%)
Frame = +1
Query: 115 IFLLNRLPIKALQQKTPFE------PRLQNLKTFGCLCFSYIPHVKRDKLDKKAEAGIFI 276
+FLLNRLP KALQQ TPFE PRLQNLKTFGCLCFSYIPHVKRDKLDKKAEA IFI
Sbjct: 470 VFLLNRLPTKALQQXTPFEAWYGYKPRLQNLKTFGCLCFSYIPHVKRDKLDKKAEAXIFI 529
Query: 277 GYSSISKAYRIYLPENNKVIASRDVKFFESESWNWEKDNKLEFQKD 414
GYSSISKAYRIYLPENNKVI SRDVKFFESESW+WE D KLEFQ++
Sbjct: 530 GYSSISKAYRIYLPENNKVIVSRDVKFFESESWSWENDKKLEFQEE 575
Score = 79.3 bits (194), Expect(2) = 2e-61
Identities = 36/40 (90%), Positives = 37/40 (92%)
Frame = +3
Query: 3 TPQQNGVVERKNRTLMEMTRCLLHDKRLPKKFWGEAAHIS 122
TPQQNGVVERKNRTLMEMTRCLLH+K LPKKFW EAAH S
Sbjct: 430 TPQQNGVVERKNRTLMEMTRCLLHEKGLPKKFWAEAAHTS 469
>CAN76284.1 hypothetical protein VITISV_041019 [Vitis vinifera]
Length = 875
Score = 181 bits (460), Expect(2) = 1e-58
Identities = 89/109 (81%), Positives = 95/109 (87%), Gaps = 6/109 (5%)
Frame = +1
Query: 115 IFLLNRLPIKALQQKTPFE------PRLQNLKTFGCLCFSYIPHVKRDKLDKKAEAGIFI 276
+F LNRLPIKA QQKTPFE PRLQN KTFGCLCFSYIPHVKRDKLDKKA+ GIFI
Sbjct: 446 VFRLNRLPIKAFQQKTPFEAWYGYKPRLQNFKTFGCLCFSYIPHVKRDKLDKKAKFGIFI 505
Query: 277 GYSSISKAYRIYLPENNKVIASRDVKFFESESWNWEKDNKLEFQKDLEF 423
GYSSISKAYRIYLPENNKVI SRDVKFFESESW+WE D KLE +++LEF
Sbjct: 506 GYSSISKAYRIYLPENNKVIFSRDVKFFESESWSWENDKKLESKENLEF 554
Score = 72.8 bits (177), Expect(2) = 1e-58
Identities = 33/40 (82%), Positives = 34/40 (85%)
Frame = +3
Query: 3 TPQQNGVVERKNRTLMEMTRCLLHDKRLPKKFWGEAAHIS 122
TPQQNGVV RKNRTLMEMTRCLL+DK LPKKFW E H S
Sbjct: 406 TPQQNGVVGRKNRTLMEMTRCLLYDKGLPKKFWAEVTHTS 445
>CAN59755.1 hypothetical protein VITISV_034567 [Vitis vinifera]
Length = 1333
Score = 156 bits (395), Expect(2) = 1e-51
Identities = 71/110 (64%), Positives = 89/110 (80%), Gaps = 6/110 (5%)
Frame = +1
Query: 109 LHIFLLNRLPIKALQQKTPFE------PRLQNLKTFGCLCFSYIPHVKRDKLDKKAEAGI 270
+ +FLLNRLP KALQ++TPFE P L NLKTFGCLCFSY+P VK+DKLDKK+E GI
Sbjct: 572 IXVFLLNRLPTKALQKQTPFEAWFGYKPMLMNLKTFGCLCFSYVPQVKKDKLDKKSEPGI 631
Query: 271 FIGYSSISKAYRIYLPENNKVIASRDVKFFESESWNWEKDNKLEFQKDLE 420
FIGYSS S AYRIYLP+NNK++ SRDVKF E+E W+W++ N+L +D++
Sbjct: 632 FIGYSSTSXAYRIYLPQNNKIVVSRDVKFLETEKWSWDEQNQLYIDEDVD 681
Score = 73.9 bits (180), Expect(2) = 1e-51
Identities = 33/39 (84%), Positives = 36/39 (92%)
Frame = +3
Query: 3 TPQQNGVVERKNRTLMEMTRCLLHDKRLPKKFWGEAAHI 119
TPQQNGVVERKNRT+MEMTRCLLH+K LPK FW EAA+I
Sbjct: 534 TPQQNGVVERKNRTIMEMTRCLLHEKELPKSFWVEAANI 572
>KYP34090.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1270
Score = 154 bits (390), Expect(2) = 3e-49
Identities = 79/110 (71%), Positives = 84/110 (76%), Gaps = 6/110 (5%)
Frame = +1
Query: 103 VRLHIFLLNRLPIKALQQKTPFE------PRLQNLKTFGCLCFSYIPHVKRDKLDKKAEA 264
V +FLLNRLP KALQQKTPFE P L NLK FGCLCFSYIPH+KRDKLDKKAE
Sbjct: 606 VNTAVFLLNRLPTKALQQKTPFEAWYGYKPELFNLKIFGCLCFSYIPHIKRDKLDKKAEP 665
Query: 265 GIFIGYSSISKAYRIYLPENNKVIASRDVKFFESESWNWEKDNKLEFQKD 414
GIF+GYS ISKAYRIYLP NKVI SRDVKF E + W+W KDNK Q D
Sbjct: 666 GIFVGYSLISKAYRIYLPHKNKVIVSRDVKFLEFDCWSW-KDNKFLEQID 714
Score = 68.2 bits (165), Expect(2) = 3e-49
Identities = 29/38 (76%), Positives = 32/38 (84%)
Frame = +3
Query: 3 TPQQNGVVERKNRTLMEMTRCLLHDKRLPKKFWGEAAH 116
+PQQNG ERKNRT+MEM RCLLHDK LPKKFW EA +
Sbjct: 570 SPQQNGTAERKNRTIMEMARCLLHDKDLPKKFWAEAVN 607
>CAN67797.1 hypothetical protein VITISV_038915 [Vitis vinifera]
Length = 518
Score = 142 bits (357), Expect(2) = 4e-48
Identities = 72/84 (85%), Positives = 73/84 (86%), Gaps = 6/84 (7%)
Frame = +1
Query: 115 IFLLNRLPIKALQQKTPFE------PRLQNLKTFGCLCFSYIPHVKRDKLDKKAEAGIFI 276
+FLLNRLP KALQQKTPFE PRLQNLKT GCLCFSYIPHVKRDKLDKKAE GIFI
Sbjct: 431 VFLLNRLPTKALQQKTPFEAWYGYKPRLQNLKTVGCLCFSYIPHVKRDKLDKKAEVGIFI 490
Query: 277 GYSSISKAYRIYLPENNKVIASRD 348
GYSSISKAYRIYL ENNKVI SRD
Sbjct: 491 GYSSISKAYRIYLLENNKVIVSRD 514
Score = 77.0 bits (188), Expect(2) = 4e-48
Identities = 35/40 (87%), Positives = 36/40 (90%)
Frame = +3
Query: 3 TPQQNGVVERKNRTLMEMTRCLLHDKRLPKKFWGEAAHIS 122
TP QNGVVERKNRTLMEMT+CLLHDK LPKKFW EAAH S
Sbjct: 391 TPDQNGVVERKNRTLMEMTKCLLHDKGLPKKFWTEAAHTS 430
>CAN64172.1 hypothetical protein VITISV_041386 [Vitis vinifera]
Length = 1132
Score = 145 bits (366), Expect(2) = 3e-47
Identities = 76/109 (69%), Positives = 81/109 (74%), Gaps = 6/109 (5%)
Frame = +1
Query: 115 IFLLNRLPIKALQQKTPFE------PRLQNLKTFGCLCFSYIPHVKRDKLDKKAEAGIFI 276
IFLL+RLP KA QQKTPFE PRLQN KTFGCLCFSYIPHVKRDKLDKKAE GIFI
Sbjct: 436 IFLLBRLPTKAXQQKTPFEAWYGYKPRLQNFKTFGCLCFSYIPHVKRDKLDKKAEVGIFI 495
Query: 277 GYSSISKAYRIYLPENNKVIASRDVKFFESESWNWEKDNKLEFQKDLEF 423
GYSSISKAYRIYL ENNK +WE D KLEF+++LEF
Sbjct: 496 GYSSISKAYRIYLLENNK---------------SWENDKKLEFKENLEF 529
Score = 70.5 bits (171), Expect(2) = 3e-47
Identities = 32/40 (80%), Positives = 33/40 (82%)
Frame = +3
Query: 3 TPQQNGVVERKNRTLMEMTRCLLHDKRLPKKFWGEAAHIS 122
TPQQN VV RKNRTLMEMTRCLL+DK LPKKFW E H S
Sbjct: 396 TPQQNXVVXRKNRTLMEMTRCLLYDKGLPKKFWAEVTHTS 435
>CAN77177.1 hypothetical protein VITISV_021789 [Vitis vinifera]
Length = 474
Score = 164 bits (416), Expect = 4e-46
Identities = 81/106 (76%), Positives = 86/106 (81%), Gaps = 6/106 (5%)
Frame = +1
Query: 124 LNRLPIKALQQKTPFE------PRLQNLKTFGCLCFSYIPHVKRDKLDKKAEAGIFIGYS 285
+ RLP KALQQ TPFE PRLQNLKTFGCLC SYI HVKRDKLDKKAE GIFIGYS
Sbjct: 331 MTRLPTKALQQNTPFEAWYGYKPRLQNLKTFGCLCSSYISHVKRDKLDKKAEVGIFIGYS 390
Query: 286 SISKAYRIYLPENNKVIASRDVKFFESESWNWEKDNKLEFQKDLEF 423
ISKAYRIY PENNKVI RDVK FE ESW+WE D KLEF+++LEF
Sbjct: 391 LISKAYRIYFPENNKVIVGRDVKLFELESWSWEDDKKLEFKENLEF 436
>CAN69956.1 hypothetical protein VITISV_032883 [Vitis vinifera]
Length = 811
Score = 138 bits (347), Expect(2) = 6e-44
Identities = 63/102 (61%), Positives = 80/102 (78%), Gaps = 6/102 (5%)
Frame = +1
Query: 115 IFLLNRLPIKALQQKTPFE------PRLQNLKTFGCLCFSYIPHVKRDKLDKKAEAGIFI 276
+FLLNRLP + LQ+KTPFE P LQNL+TFGCLCFSY+P VKRDKLDKKA+ G+FI
Sbjct: 316 VFLLNRLPTRVLQKKTPFEAWFGYKPDLQNLRTFGCLCFSYVPQVKRDKLDKKAKPGVFI 375
Query: 277 GYSSISKAYRIYLPENNKVIASRDVKFFESESWNWEKDNKLE 402
GYS+ S+AYRI+ P+N K++ S+DVKF E WN E+ K++
Sbjct: 376 GYSNSSEAYRIFQPQNGKILVSKDVKFMEDRQWNCEESIKMQ 417
Score = 67.0 bits (162), Expect(2) = 6e-44
Identities = 28/38 (73%), Positives = 33/38 (86%)
Frame = +3
Query: 3 TPQQNGVVERKNRTLMEMTRCLLHDKRLPKKFWGEAAH 116
TPQQNGV ERKNR++MEMTRC+LH+K LPKK W E A+
Sbjct: 276 TPQQNGVSERKNRSIMEMTRCMLHEKELPKKLWAETAN 313
>CAN77916.1 hypothetical protein VITISV_031396 [Vitis vinifera]
Length = 874
Score = 159 bits (403), Expect = 1e-42
Identities = 80/107 (74%), Positives = 86/107 (80%), Gaps = 6/107 (5%)
Frame = +1
Query: 121 LLNRLPIKALQQKTPFEP------RLQNLKTFGCLCFSYIPHVKRDKLDKKAEAGIFIGY 282
L +L +A TPFE RLQNLK FGCLCFSYIPHVKRDKLDKK EA IFIGY
Sbjct: 461 LPKKLWAEAAHTSTPFEAWYGYKTRLQNLKAFGCLCFSYIPHVKRDKLDKKTEARIFIGY 520
Query: 283 SSISKAYRIYLPENNKVIASRDVKFFESESWNWEKDNKLEFQKDLEF 423
SSISKAYRIYLPENNKVI SRDVKFFESESW+WE D KLEF+++LEF
Sbjct: 521 SSISKAYRIYLPENNKVIVSRDVKFFESESWSWENDKKLEFKENLEF 567
Score = 76.3 bits (186), Expect = 2e-13
Identities = 36/52 (69%), Positives = 40/52 (76%)
Frame = +3
Query: 3 TPQQNGVVERKNRTLMEMTRCLLHDKRLPKKFWGEAAHISTE*TANKSFATK 158
TP QNGVVE+KNRTL+EMTRCLLHDK LPKK W EAAH ST A + T+
Sbjct: 434 TPHQNGVVEKKNRTLVEMTRCLLHDKGLPKKLWAEAAHTSTPFEAWYGYKTR 485
>KYP62303.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 238
Score = 144 bits (363), Expect = 2e-40
Identities = 68/101 (67%), Positives = 81/101 (80%), Gaps = 6/101 (5%)
Frame = +1
Query: 115 IFLLNRLPIKALQQKTPFE------PRLQNLKTFGCLCFSYIPHVKRDKLDKKAEAGIFI 276
IFLLNRLP KAL + TPFE P+ NLK FGCLCFSYIP +KRDKLDKKAEAGIF+
Sbjct: 24 IFLLNRLPTKALSKSTPFEAWYDFKPKFINLKVFGCLCFSYIPQIKRDKLDKKAEAGIFV 83
Query: 277 GYSSISKAYRIYLPENNKVIASRDVKFFESESWNWEKDNKL 399
GY+S SKAY+I+LP++NK+I SRDV+FFE E W+ E + KL
Sbjct: 84 GYNSTSKAYKIFLPQSNKIIVSRDVQFFEEEKWSKESEKKL 124
>KYP38814.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 611
Score = 125 bits (313), Expect(2) = 2e-39
Identities = 57/99 (57%), Positives = 72/99 (72%), Gaps = 6/99 (6%)
Frame = +1
Query: 115 IFLLNRLPIKALQQKTPFE------PRLQNLKTFGCLCFSYIPHVKRDKLDKKAEAGIFI 276
+FLLNRLP K + KTP+E P +QN K F C+CF+Y+P VKRDKLDK+ EA IFI
Sbjct: 316 VFLLNRLPTKVVPGKTPYEAWYGYKPFVQNFKVFACICFTYVPKVKRDKLDKRVEARIFI 375
Query: 277 GYSSISKAYRIYLPENNKVIASRDVKFFESESWNWEKDN 393
YS+ SKAYR+Y P+ K++ SRDV F E + WNWEKD+
Sbjct: 376 DYSTPSKAYRVYQPQTGKILISRDVCFVEDKQWNWEKDD 414
Score = 65.1 bits (157), Expect(2) = 2e-39
Identities = 28/38 (73%), Positives = 33/38 (86%)
Frame = +3
Query: 3 TPQQNGVVERKNRTLMEMTRCLLHDKRLPKKFWGEAAH 116
TPQQNGV ERKNRT+MEM R ++H+K LPKKFW EAA+
Sbjct: 276 TPQQNGVSERKNRTIMEMARSMMHEKGLPKKFWAEAAN 313
>CAN63433.1 hypothetical protein VITISV_033829 [Vitis vinifera]
Length = 1072
Score = 116 bits (290), Expect(2) = 2e-39
Identities = 56/77 (72%), Positives = 63/77 (81%), Gaps = 6/77 (7%)
Frame = +1
Query: 115 IFLLNRLPIKALQQKTPFE------PRLQNLKTFGCLCFSYIPHVKRDKLDKKAEAGIFI 276
+FLLN LP KALQ++ PFE P L NLKTFGCLCFSY+P VKRDKLDKK+E GIFI
Sbjct: 546 VFLLNILPTKALQKQAPFEAWFGYKPMLMNLKTFGCLCFSYVPQVKRDKLDKKSEPGIFI 605
Query: 277 GYSSISKAYRIYLPENN 327
GY+S SKAYRIYLP+NN
Sbjct: 606 GYNSTSKAYRIYLPQNN 622
Score = 73.6 bits (179), Expect(2) = 2e-39
Identities = 32/38 (84%), Positives = 35/38 (92%)
Frame = +3
Query: 3 TPQQNGVVERKNRTLMEMTRCLLHDKRLPKKFWGEAAH 116
TPQQNGVVERKNRT+MEMTRCLLH+K LPK FW EAA+
Sbjct: 506 TPQQNGVVERKNRTIMEMTRCLLHEKELPKSFWAEAAN 543
>KYP36206.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 861
Score = 123 bits (309), Expect(2) = 5e-39
Identities = 57/101 (56%), Positives = 73/101 (72%), Gaps = 6/101 (5%)
Frame = +1
Query: 115 IFLLNRLPIKALQQKTPFE------PRLQNLKTFGCLCFSYIPHVKRDKLDKKAEAGIFI 276
+FLLNRLP KA+ KTPFE P L+N K FGCL F+Y+P +KRDKLDKKAE G+F+
Sbjct: 622 VFLLNRLPTKAVDGKTPFEVWYGYKPFLKNFKVFGCLYFTYVPQIKRDKLDKKAEPGVFV 681
Query: 277 GYSSISKAYRIYLPENNKVIASRDVKFFESESWNWEKDNKL 399
GYSS+SKAYRI+ P K++ S+DV F E+E W+ K+
Sbjct: 682 GYSSVSKAYRIFQPHTKKILISKDVHFMENEKWSSNNVEKI 722
Score = 65.1 bits (157), Expect(2) = 5e-39
Identities = 27/37 (72%), Positives = 33/37 (89%)
Frame = +3
Query: 6 PQQNGVVERKNRTLMEMTRCLLHDKRLPKKFWGEAAH 116
PQQNGV ERKNRT+MEM RC+LH+K LPK++W EAA+
Sbjct: 583 PQQNGVSERKNRTIMEMVRCMLHEKGLPKEYWAEAAN 619
>KYP70533.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 459
Score = 122 bits (307), Expect(2) = 1e-38
Identities = 57/99 (57%), Positives = 70/99 (70%), Gaps = 6/99 (6%)
Frame = +1
Query: 118 FLLNRLPIKALQQKTPFE------PRLQNLKTFGCLCFSYIPHVKRDKLDKKAEAGIFIG 279
FL NRLP KAL +TPFE P ++ LK FGCLCF+++P KRDKLDK+A GIFIG
Sbjct: 107 FLHNRLPTKALNDQTPFEVWHGYKPSMKFLKIFGCLCFTHVPQSKRDKLDKRASQGIFIG 166
Query: 280 YSSISKAYRIYLPENNKVIASRDVKFFESESWNWEKDNK 396
YS++SKAY+I+ P+ K+I SRDV F E E WNW K
Sbjct: 167 YSTVSKAYKIFQPQTGKIIISRDVHFLEDEEWNWNDKRK 205
Score = 64.7 bits (156), Expect(2) = 1e-38
Identities = 27/41 (65%), Positives = 35/41 (85%)
Frame = +3
Query: 3 TPQQNGVVERKNRTLMEMTRCLLHDKRLPKKFWGEAAHIST 125
TPQQNGV ER+NR ++EMTRC+L++K LPK+FW EAA +T
Sbjct: 66 TPQQNGVSERRNRYILEMTRCMLYEKNLPKEFWAEAASTTT 106
>KYP61490.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1256
Score = 121 bits (304), Expect(2) = 4e-38
Identities = 59/115 (51%), Positives = 77/115 (66%), Gaps = 11/115 (9%)
Frame = +1
Query: 103 VRLHIFLLNRLPIKALQQKTPFE------PRLQNLKTFGCLCFSYIPHVKRDKLDKKAEA 264
V ++LLN LP KAL+ TPFE P +++LK FGC+C++ +P VKRDKLD+K+E
Sbjct: 588 VNTSVYLLNLLPTKALKGNTPFEAWHGRTPSVEHLKVFGCVCYALVPEVKRDKLDQKSEV 647
Query: 265 GIFIGYSSISKAYRIYLPENNKVIASRDVKFFESESWNWEK-----DNKLEFQKD 414
GIF+GYSS SK YRIY P K++ SR+VKF E WNWEK NK + + D
Sbjct: 648 GIFLGYSSYSKGYRIYNPATKKILVSRNVKFDELSRWNWEKSKAEASNKRQLEVD 702
Score = 63.9 bits (154), Expect(2) = 4e-38
Identities = 29/40 (72%), Positives = 32/40 (80%)
Frame = +3
Query: 3 TPQQNGVVERKNRTLMEMTRCLLHDKRLPKKFWGEAAHIS 122
TPQQNGV ERKNRT+MEM RCLL +K LPK FW EA + S
Sbjct: 552 TPQQNGVSERKNRTVMEMARCLLFEKGLPKTFWAEAVNTS 591
>KYP46287.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 715
Score = 121 bits (304), Expect(2) = 4e-38
Identities = 59/115 (51%), Positives = 77/115 (66%), Gaps = 11/115 (9%)
Frame = +1
Query: 103 VRLHIFLLNRLPIKALQQKTPFE------PRLQNLKTFGCLCFSYIPHVKRDKLDKKAEA 264
V ++LLN LP KAL+ TPFE P +++LK FGC+C++ +P VKRDKLD+K+E
Sbjct: 47 VNTSVYLLNLLPTKALKGNTPFEAWHGRTPSVEHLKVFGCVCYALVPEVKRDKLDQKSEV 106
Query: 265 GIFIGYSSISKAYRIYLPENNKVIASRDVKFFESESWNWEK-----DNKLEFQKD 414
GIF+GYSS SK YRIY P K++ SR+VKF E WNWEK NK + + D
Sbjct: 107 GIFLGYSSYSKGYRIYNPATKKILVSRNVKFDELSRWNWEKSKAEASNKRQLEVD 161
Score = 63.9 bits (154), Expect(2) = 4e-38
Identities = 29/40 (72%), Positives = 32/40 (80%)
Frame = +3
Query: 3 TPQQNGVVERKNRTLMEMTRCLLHDKRLPKKFWGEAAHIS 122
TPQQNGV ERKNRT+MEM RCLL +K LPK FW EA + S
Sbjct: 11 TPQQNGVSERKNRTVMEMARCLLFEKGLPKTFWAEAVNTS 50
>KYP68556.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 819
Score = 119 bits (299), Expect(2) = 9e-38
Identities = 55/99 (55%), Positives = 70/99 (70%), Gaps = 6/99 (6%)
Frame = +1
Query: 118 FLLNRLPIKALQQKTPFE------PRLQNLKTFGCLCFSYIPHVKRDKLDKKAEAGIFIG 279
FL NRLP KAL +TPFE P ++ LK FGCLCF+++P KRDKLDK+A GIFIG
Sbjct: 640 FLQNRLPTKALNDQTPFEVWHGYKPSMKFLKIFGCLCFTHVPQSKRDKLDKRASPGIFIG 699
Query: 280 YSSISKAYRIYLPENNKVIASRDVKFFESESWNWEKDNK 396
YS++SKAY+I+ P+ K+I S +V F E E WNW+ K
Sbjct: 700 YSTVSKAYKIFQPQTGKIIISSNVHFLEDEEWNWDDKRK 738
Score = 64.7 bits (156), Expect(2) = 9e-38
Identities = 27/41 (65%), Positives = 35/41 (85%)
Frame = +3
Query: 3 TPQQNGVVERKNRTLMEMTRCLLHDKRLPKKFWGEAAHIST 125
TPQQNGV ER+NR ++EMTRC+L++K LPK+FW EAA +T
Sbjct: 599 TPQQNGVSERRNRYILEMTRCMLYEKNLPKEFWAEAASTTT 639
>OMO54668.1 Zinc finger, CCHC-type [Corchorus capsularis]
Length = 979
Score = 121 bits (304), Expect(2) = 6e-37
Identities = 55/112 (49%), Positives = 78/112 (69%), Gaps = 6/112 (5%)
Frame = +1
Query: 103 VRLHIFLLNRLPIKALQQKTPFE------PRLQNLKTFGCLCFSYIPHVKRDKLDKKAEA 264
V +++LNRL KA+QQ TPFE P +++LK FGC+C+S++P V+RDKLDK++E
Sbjct: 347 VNTAVYILNRLTAKAMQQTTPFEAWYGFRPSVKHLKVFGCICYSHVPSVRRDKLDKRSEM 406
Query: 265 GIFIGYSSISKAYRIYLPENNKVIASRDVKFFESESWNWEKDNKLEFQKDLE 420
G+ +GYS +K YRIY P NKVI SRDVKF E +W W ++ +++ D E
Sbjct: 407 GVLVGYSESAKGYRIYNPVTNKVIVSRDVKFDELAAWKWPENEEIQSLNDKE 458
Score = 60.1 bits (144), Expect(2) = 6e-37
Identities = 26/38 (68%), Positives = 31/38 (81%)
Frame = +3
Query: 3 TPQQNGVVERKNRTLMEMTRCLLHDKRLPKKFWGEAAH 116
TPQQNGV ERKNRT++EM RCLL +K LPKK W +A +
Sbjct: 311 TPQQNGVSERKNRTVLEMARCLLFEKGLPKKLWAKAVN 348
>KYP64079.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 343
Score = 137 bits (345), Expect(2) = 1e-36
Identities = 68/107 (63%), Positives = 81/107 (75%), Gaps = 6/107 (5%)
Frame = +1
Query: 103 VRLHIFLLNRLPIKALQQKTPFE------PRLQNLKTFGCLCFSYIPHVKRDKLDKKAEA 264
V +FLLNRLP K+L + T FE P+L NLKTFGCL FSYIP VKRDKLDKKAE
Sbjct: 22 VNTTVFLLNRLPTKSLPKSTRFEAWYGYKPKLLNLKTFGCLSFSYIPQVKRDKLDKKAEP 81
Query: 265 GIFIGYSSISKAYRIYLPENNKVIASRDVKFFESESWNWEKDNKLEF 405
GIF+GYS SKAYRIYLP++NKVI SRDV+F E + W+WE+ + +F
Sbjct: 82 GIFVGYSLQSKAYRIYLPQSNKVIISRDVQFLEDKQWSWEEPIQKDF 128
Score = 43.5 bits (101), Expect(2) = 1e-36
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = +3
Query: 48 MEMTRCLLHDKRLPKKFWGEAAH 116
MEM RCLLHDK LPKKFW EA +
Sbjct: 1 MEMARCLLHDKWLPKKFWAEAVN 23