BLASTX nr result

ID: Panax24_contig00037465 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00037465
         (477 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KZM99680.1 hypothetical protein DCAR_012958 [Daucus carota subsp...   125   2e-30
XP_017247298.1 PREDICTED: pentatricopeptide repeat-containing pr...   125   3e-30
KVH96615.1 hypothetical protein Ccrd_001299 [Cynara cardunculus ...   121   6e-29
XP_018831049.1 PREDICTED: uncharacterized protein LOC108998802 [...   116   3e-27
EEF34348.1 pentatricopeptide repeat-containing protein, putative...   115   3e-27
XP_002528030.2 PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide...   115   8e-27
OAY21376.1 hypothetical protein MANES_S092700 [Manihot esculenta]     113   3e-26
XP_006478380.1 PREDICTED: pentatricopeptide repeat-containing pr...   112   5e-26
KDO51734.1 hypothetical protein CISIN_1g047571mg [Citrus sinensis]    112   1e-25
JAU87257.1 Pentatricopeptide repeat-containing protein, chloropl...   105   4e-25
EOY03311.1 Pentatricopeptide repeat (PPR-like) superfamily prote...   110   5e-25
EOY17085.1 Pentatricopeptide repeat (PPR-like) superfamily prote...   108   6e-25
XP_012077266.1 PREDICTED: pentatricopeptide repeat-containing pr...   109   6e-25
XP_019461265.1 PREDICTED: pentatricopeptide repeat-containing pr...   108   1e-24
XP_007032385.2 PREDICTED: pentatricopeptide repeat-containing pr...   108   2e-24
XP_006390769.1 hypothetical protein EUTSA_v10019712mg [Eutrema s...   107   4e-24
JAU76602.1 Pentatricopeptide repeat-containing protein, chloropl...   105   7e-24
JAU32545.1 Pentatricopeptide repeat-containing protein, chloropl...   105   1e-23
ONI22333.1 hypothetical protein PRUPE_2G122200 [Prunus persica]       105   2e-23
XP_002325518.2 pentatricopeptide repeat-containing family protei...   105   2e-23

>KZM99680.1 hypothetical protein DCAR_012958 [Daucus carota subsp. sativus]
          Length = 693

 Score =  125 bits (313), Expect = 2e-30
 Identities = 66/114 (57%), Positives = 83/114 (72%), Gaps = 4/114 (3%)
 Frame = +1

Query: 148 SSYFHSLSPNPLNKYNNCHHFFKTKASNL----YQSQTIRKQQKKRPSNSPAKSEGNFSE 315
           SS F+  SP+  +K+    HFF+TK+S      + SQT RK  KK P  SPAK+   F E
Sbjct: 12  SSIFNCFSPSLPHKH--ALHFFRTKSSASPPPSFHSQTPRKFFKKPPFKSPAKNVRKFKE 69

Query: 316 KDAFPKSLPLHTKNPYAIYNDIERFAKQNKLKEALTILDYLDKRGVPVNPTTFS 477
            DAFP SLP+  +NP+AIY+DI+RFA+QNKLKEAL ILDY+D+RG+PVNPTTFS
Sbjct: 70  SDAFPMSLPIQGRNPFAIYSDIQRFAEQNKLKEALAILDYMDQRGIPVNPTTFS 123


>XP_017247298.1 PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
           chloroplastic [Daucus carota subsp. sativus]
          Length = 717

 Score =  125 bits (313), Expect = 3e-30
 Identities = 66/114 (57%), Positives = 83/114 (72%), Gaps = 4/114 (3%)
 Frame = +1

Query: 148 SSYFHSLSPNPLNKYNNCHHFFKTKASNL----YQSQTIRKQQKKRPSNSPAKSEGNFSE 315
           SS F+  SP+  +K+    HFF+TK+S      + SQT RK  KK P  SPAK+   F E
Sbjct: 36  SSIFNCFSPSLPHKH--ALHFFRTKSSASPPPSFHSQTPRKFFKKPPFKSPAKNVRKFKE 93

Query: 316 KDAFPKSLPLHTKNPYAIYNDIERFAKQNKLKEALTILDYLDKRGVPVNPTTFS 477
            DAFP SLP+  +NP+AIY+DI+RFA+QNKLKEAL ILDY+D+RG+PVNPTTFS
Sbjct: 94  SDAFPMSLPIQGRNPFAIYSDIQRFAEQNKLKEALAILDYMDQRGIPVNPTTFS 147


>KVH96615.1 hypothetical protein Ccrd_001299 [Cynara cardunculus var. scolymus]
          Length = 692

 Score =  121 bits (303), Expect = 6e-29
 Identities = 63/106 (59%), Positives = 76/106 (71%)
 Frame = +1

Query: 160 HSLSPNPLNKYNNCHHFFKTKASNLYQSQTIRKQQKKRPSNSPAKSEGNFSEKDAFPKSL 339
           H    NPL+  N+    FK+ A +  QSQ+  + Q + P+    +   +F EKDAFP S+
Sbjct: 17  HLFPLNPLSNQNHPTFKFKSTAFSP-QSQSQSQSQSQTPTGRKHRKPPDFDEKDAFPSSI 75

Query: 340 PLHTKNPYAIYNDIERFAKQNKLKEALTILDYLDKRGVPVNPTTFS 477
           PLHTKNP AIY DI+RFA+QNKLKEALTILDYLDKRGVPVNPTTFS
Sbjct: 76  PLHTKNPNAIYKDIQRFAQQNKLKEALTILDYLDKRGVPVNPTTFS 121


>XP_018831049.1 PREDICTED: uncharacterized protein LOC108998802 [Juglans regia]
          Length = 1464

 Score =  116 bits (291), Expect = 3e-27
 Identities = 61/122 (50%), Positives = 77/122 (63%), Gaps = 14/122 (11%)
 Frame = +1

Query: 154  YFHSLSPNPLNKYNN-CHHFFKTKASNLYQSQTIRKQQKKRPSNSP-------------A 291
            + H+  PNP   YNN   H+FKT+AS   +S  I   + +RPS  P              
Sbjct: 775  HLHTFRPNPFTNYNNDSRHYFKTRASR--KSPPIHTHKPRRPSTHPHHRYNKRSSRFPTR 832

Query: 292  KSEGNFSEKDAFPKSLPLHTKNPYAIYNDIERFAKQNKLKEALTILDYLDKRGVPVNPTT 471
            K    F+ +D FP SLPLHTKNP+AIY DI+RFA +NKL++AL ILDYLD+ G+PVNPTT
Sbjct: 833  KRPQPFATEDGFPDSLPLHTKNPHAIYKDIQRFAWKNKLEKALAILDYLDQEGIPVNPTT 892

Query: 472  FS 477
            FS
Sbjct: 893  FS 894


>EEF34348.1 pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 456

 Score =  115 bits (287), Expect = 3e-27
 Identities = 63/111 (56%), Positives = 74/111 (66%), Gaps = 1/111 (0%)
 Frame = +1

Query: 148 SSYFHSLSPNPLNKYNNCHHFFKTKA-SNLYQSQTIRKQQKKRPSNSPAKSEGNFSEKDA 324
           S + HS  PNPLN   N   FFK KA SN  Q  T    +  R  N   K +  F EKDA
Sbjct: 13  SLHLHSFPPNPLN---NSEQFFKFKAYSNRTQKSTKHLNRYLRYHNIK-KRKSRFREKDA 68

Query: 325 FPKSLPLHTKNPYAIYNDIERFAKQNKLKEALTILDYLDKRGVPVNPTTFS 477
           FP SLPLHTKNP A+Y DI+RF +QNKLKEAL I+DYL+++G+PVN TTFS
Sbjct: 69  FPSSLPLHTKNPSAVYKDIQRFTRQNKLKEALIIMDYLEQQGIPVNATTFS 119


>XP_002528030.2 PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g71460, chloroplastic [Ricinus communis]
          Length = 692

 Score =  115 bits (287), Expect = 8e-27
 Identities = 63/111 (56%), Positives = 74/111 (66%), Gaps = 1/111 (0%)
 Frame = +1

Query: 148 SSYFHSLSPNPLNKYNNCHHFFKTKA-SNLYQSQTIRKQQKKRPSNSPAKSEGNFSEKDA 324
           S + HS  PNPLN   N   FFK KA SN  Q  T    +  R  N   K +  F EKDA
Sbjct: 13  SLHLHSFPPNPLN---NSEQFFKFKAYSNRTQKSTKHLNRYLRYHNIK-KRKSRFREKDA 68

Query: 325 FPKSLPLHTKNPYAIYNDIERFAKQNKLKEALTILDYLDKRGVPVNPTTFS 477
           FP SLPLHTKNP A+Y DI+RF +QNKLKEAL I+DYL+++G+PVN TTFS
Sbjct: 69  FPSSLPLHTKNPSAVYKDIQRFTRQNKLKEALIIMDYLEQQGIPVNATTFS 119


>OAY21376.1 hypothetical protein MANES_S092700 [Manihot esculenta]
          Length = 680

 Score =  113 bits (283), Expect = 3e-26
 Identities = 61/111 (54%), Positives = 79/111 (71%), Gaps = 1/111 (0%)
 Frame = +1

Query: 148 SSYFHSLSPNPLNKYNNCHHFFKTKAS-NLYQSQTIRKQQKKRPSNSPAKSEGNFSEKDA 324
           S + HS  PNP   +N    FFK KAS N  + +   K +K++ ++S       F+EKDA
Sbjct: 10  SLHLHSFPPNP---FNITSQFFKIKASQNPIKHRGFPKYRKRKHNSS-------FTEKDA 59

Query: 325 FPKSLPLHTKNPYAIYNDIERFAKQNKLKEALTILDYLDKRGVPVNPTTFS 477
           FP+SLPL TKNP A+Y DI+RFA+QNKLKEALTI+DYLD++G+PVN TTFS
Sbjct: 60  FPESLPLQTKNPAAVYKDIQRFARQNKLKEALTIMDYLDQQGIPVNVTTFS 110


>XP_006478380.1 PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
           chloroplastic [Citrus sinensis]
          Length = 681

 Score =  112 bits (281), Expect = 5e-26
 Identities = 59/106 (55%), Positives = 72/106 (67%)
 Frame = +1

Query: 160 HSLSPNPLNKYNNCHHFFKTKASNLYQSQTIRKQQKKRPSNSPAKSEGNFSEKDAFPKSL 339
           HS  PNP++   N H FFK KAS      T  +++KK  +   A       EKDAFP SL
Sbjct: 16  HSFPPNPIS---NNHQFFKLKASATKPESTYFQKRKKHHTKKSA-------EKDAFPSSL 65

Query: 340 PLHTKNPYAIYNDIERFAKQNKLKEALTILDYLDKRGVPVNPTTFS 477
           PLH KNP AIY DI+RFA+QNKLKEAL ILDY+D++G+PVN TTF+
Sbjct: 66  PLHEKNPRAIYKDIQRFARQNKLKEALVILDYMDQQGIPVNVTTFN 111


>KDO51734.1 hypothetical protein CISIN_1g047571mg [Citrus sinensis]
          Length = 681

 Score =  112 bits (279), Expect = 1e-25
 Identities = 59/106 (55%), Positives = 72/106 (67%)
 Frame = +1

Query: 160 HSLSPNPLNKYNNCHHFFKTKASNLYQSQTIRKQQKKRPSNSPAKSEGNFSEKDAFPKSL 339
           HS  PNP++   N H FFK KAS      T  +++KK  +   A       EKDAFP SL
Sbjct: 16  HSFPPNPIS---NNHQFFKLKASATKPESTYFQKRKKYHTKKSA-------EKDAFPSSL 65

Query: 340 PLHTKNPYAIYNDIERFAKQNKLKEALTILDYLDKRGVPVNPTTFS 477
           PLH KNP AIY DI+RFA+QNKLKEAL ILDY+D++G+PVN TTF+
Sbjct: 66  PLHEKNPRAIYKDIQRFARQNKLKEALVILDYMDQQGIPVNVTTFN 111


>JAU87257.1 Pentatricopeptide repeat-containing protein, chloroplastic, partial
           [Noccaea caerulescens]
          Length = 220

 Score =  105 bits (261), Expect = 4e-25
 Identities = 49/76 (64%), Positives = 64/76 (84%), Gaps = 1/76 (1%)
 Frame = +1

Query: 253 RKQQKKRPSN-SPAKSEGNFSEKDAFPKSLPLHTKNPYAIYNDIERFAKQNKLKEALTIL 429
           R  + +RPS+ SPAK+   F E+DAFP SLPLH+KNPY+I+ DI+ FA+QNKL++ALTIL
Sbjct: 10  RPSRSRRPSSTSPAKNPKPFRERDAFPSSLPLHSKNPYSIHRDIQNFARQNKLEDALTIL 69

Query: 430 DYLDKRGVPVNPTTFS 477
           DYL++RG+PVN TTFS
Sbjct: 70  DYLEQRGIPVNATTFS 85


>EOY03311.1 Pentatricopeptide repeat (PPR-like) superfamily protein [Theobroma
           cacao]
          Length = 683

 Score =  110 bits (274), Expect = 5e-25
 Identities = 59/106 (55%), Positives = 74/106 (69%)
 Frame = +1

Query: 160 HSLSPNPLNKYNNCHHFFKTKASNLYQSQTIRKQQKKRPSNSPAKSEGNFSEKDAFPKSL 339
           HS  PNP    NN   F + KAS    +++  K Q+     +  +S   F EK+AFP SL
Sbjct: 14  HSFPPNPFFCRNN--QFSRIKAS----ARSPPKPQRNPTIFAHRRSPPPFFEKNAFPSSL 67

Query: 340 PLHTKNPYAIYNDIERFAKQNKLKEALTILDYLDKRGVPVNPTTFS 477
           PLHTKNP+AIY DI+RFA+QNKLKEAL ILDY+D++G+PVNPTTFS
Sbjct: 68  PLHTKNPHAIYKDIQRFARQNKLKEALAILDYVDQQGIPVNPTTFS 113


>EOY17085.1 Pentatricopeptide repeat (PPR-like) superfamily protein, putative
           [Theobroma cacao]
          Length = 431

 Score =  108 bits (270), Expect = 6e-25
 Identities = 60/106 (56%), Positives = 73/106 (68%)
 Frame = +1

Query: 160 HSLSPNPLNKYNNCHHFFKTKASNLYQSQTIRKQQKKRPSNSPAKSEGNFSEKDAFPKSL 339
           HS  PNPL   NN   F K KAS    +++  K QK     +  +S   F EK AFP  L
Sbjct: 14  HSSPPNPLFYRNN--QFSKIKAS----ARSPPKPQKDPTKFTHRRSPPPFFEKYAFPSPL 67

Query: 340 PLHTKNPYAIYNDIERFAKQNKLKEALTILDYLDKRGVPVNPTTFS 477
           PLHTKNP+AIY DI+RFA+QNKLKEAL ILDY++++G+PVNPTTFS
Sbjct: 68  PLHTKNPHAIYKDIQRFARQNKLKEALAILDYVNQQGIPVNPTTFS 113


>XP_012077266.1 PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
           chloroplastic [Jatropha curcas] KDP45625.1 hypothetical
           protein JCGZ_17232 [Jatropha curcas]
          Length = 687

 Score =  109 bits (273), Expect = 6e-25
 Identities = 59/107 (55%), Positives = 71/107 (66%), Gaps = 1/107 (0%)
 Frame = +1

Query: 160 HSLSPNPLNKYN-NCHHFFKTKASNLYQSQTIRKQQKKRPSNSPAKSEGNFSEKDAFPKS 336
           HS SPNP N  + N  HFFK  A          K+ +KR      K    F EKDAFP S
Sbjct: 14  HSFSPNPFNNGDHNNKHFFKIMAC---MPTPYPKRYRKRIPKYQKKKLKRFKEKDAFPAS 70

Query: 337 LPLHTKNPYAIYNDIERFAKQNKLKEALTILDYLDKRGVPVNPTTFS 477
           LPLH+KNP AI  DI++FA++NKLKEALTI+DYLD++G+PVN TTFS
Sbjct: 71  LPLHSKNPGAICEDIQKFARENKLKEALTIMDYLDQQGIPVNVTTFS 117


>XP_019461265.1 PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
           chloroplastic [Lupinus angustifolius]
          Length = 702

 Score =  108 bits (271), Expect = 1e-24
 Identities = 59/115 (51%), Positives = 73/115 (63%), Gaps = 11/115 (9%)
 Frame = +1

Query: 166 LSPNPLNKYNNCHHFFK-----------TKASNLYQSQTIRKQQKKRPSNSPAKSEGNFS 312
           LSPNP NK N  +  F            + +S    ++      +K+P  S  K    F 
Sbjct: 20  LSPNPFNKTNKTNKTFHLLHFKPPSKTPSPSSPSITTKNNNNNNRKKPKKSLKKP---FQ 76

Query: 313 EKDAFPKSLPLHTKNPYAIYNDIERFAKQNKLKEALTILDYLDKRGVPVNPTTFS 477
           EKDAFP SLPLHTKNP +IYNDI+RFA+ NKLKEALTILDY+D++G+PVN TTFS
Sbjct: 77  EKDAFPSSLPLHTKNPRSIYNDIKRFARLNKLKEALTILDYVDQQGIPVNATTFS 131


>XP_007032385.2 PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
           chloroplastic [Theobroma cacao]
          Length = 683

 Score =  108 bits (269), Expect = 2e-24
 Identities = 58/106 (54%), Positives = 74/106 (69%)
 Frame = +1

Query: 160 HSLSPNPLNKYNNCHHFFKTKASNLYQSQTIRKQQKKRPSNSPAKSEGNFSEKDAFPKSL 339
           HS  PNP    NN   F + KAS    +++  K Q+     +  +S   F EK+AFP SL
Sbjct: 14  HSFPPNPFFCRNN--QFSRIKAS----ARSPPKPQRNPTIFAHRRSPPPFFEKNAFPSSL 67

Query: 340 PLHTKNPYAIYNDIERFAKQNKLKEALTILDYLDKRGVPVNPTTFS 477
           PLHTKNP+AIY DI+RFA+QNKLKEAL ILDY+D++G+PV+PTTFS
Sbjct: 68  PLHTKNPHAIYKDIQRFARQNKLKEALAILDYVDQQGIPVSPTTFS 113


>XP_006390769.1 hypothetical protein EUTSA_v10019712mg [Eutrema salsugineum]
           ESQ28055.1 hypothetical protein EUTSA_v10019712mg
           [Eutrema salsugineum]
          Length = 688

 Score =  107 bits (267), Expect = 4e-24
 Identities = 49/75 (65%), Positives = 62/75 (82%)
 Frame = +1

Query: 253 RKQQKKRPSNSPAKSEGNFSEKDAFPKSLPLHTKNPYAIYNDIERFAKQNKLKEALTILD 432
           R  + +RPS SPAK+   F E+DAFP SLPLH+KNPY I+ DI+ FA+QNKL++ALTILD
Sbjct: 40  RPSRSRRPSISPAKNPKPFRERDAFPSSLPLHSKNPYIIHRDIQNFARQNKLEDALTILD 99

Query: 433 YLDKRGVPVNPTTFS 477
           YL++RG+PVN TTFS
Sbjct: 100 YLEQRGIPVNATTFS 114


>JAU76602.1 Pentatricopeptide repeat-containing protein, chloroplastic, partial
           [Noccaea caerulescens]
          Length = 456

 Score =  105 bits (263), Expect = 7e-24
 Identities = 52/93 (55%), Positives = 70/93 (75%), Gaps = 1/93 (1%)
 Frame = +1

Query: 202 HHFFKTKASNLYQSQTIRKQQKKRPSN-SPAKSEGNFSEKDAFPKSLPLHTKNPYAIYND 378
           H  FK +    + +   R  + +RPS+ SPAK+   F E+DAFP SLPLH+KNPY+I+ D
Sbjct: 24  HRSFKKRGPAKFPA---RPSRSRRPSSTSPAKNPKPFRERDAFPSSLPLHSKNPYSIHRD 80

Query: 379 IERFAKQNKLKEALTILDYLDKRGVPVNPTTFS 477
           I+ FA+QNKL++ALTILDYL++RG+PVN TTFS
Sbjct: 81  IQNFARQNKLEDALTILDYLEQRGIPVNATTFS 113


>JAU32545.1 Pentatricopeptide repeat-containing protein, chloroplastic, partial
           [Noccaea caerulescens]
          Length = 548

 Score =  105 bits (263), Expect = 1e-23
 Identities = 52/93 (55%), Positives = 70/93 (75%), Gaps = 1/93 (1%)
 Frame = +1

Query: 202 HHFFKTKASNLYQSQTIRKQQKKRPSN-SPAKSEGNFSEKDAFPKSLPLHTKNPYAIYND 378
           H  FK +    + +   R  + +RPS+ SPAK+   F E+DAFP SLPLH+KNPY+I+ D
Sbjct: 4   HRSFKKRGPAKFPA---RPSRSRRPSSTSPAKNPKPFRERDAFPSSLPLHSKNPYSIHRD 60

Query: 379 IERFAKQNKLKEALTILDYLDKRGVPVNPTTFS 477
           I+ FA+QNKL++ALTILDYL++RG+PVN TTFS
Sbjct: 61  IQNFARQNKLEDALTILDYLEQRGIPVNATTFS 93


>ONI22333.1 hypothetical protein PRUPE_2G122200 [Prunus persica]
          Length = 678

 Score =  105 bits (262), Expect = 2e-23
 Identities = 54/110 (49%), Positives = 74/110 (67%)
 Frame = +1

Query: 148 SSYFHSLSPNPLNKYNNCHHFFKTKASNLYQSQTIRKQQKKRPSNSPAKSEGNFSEKDAF 327
           S + HS  PN      NC++    K    ++ + + ++Q+K P+         F+E DAF
Sbjct: 12  SLHHHSFPPNIWFTATNCNN---CKNHQTFKMKALTRRQQKTPT---------FAENDAF 59

Query: 328 PKSLPLHTKNPYAIYNDIERFAKQNKLKEALTILDYLDKRGVPVNPTTFS 477
           P SLPLHTKNP+AIY DI+ FA++NKLKEAL+ILDYLD++G+PVN TTFS
Sbjct: 60  PDSLPLHTKNPHAIYKDIQSFARRNKLKEALSILDYLDQQGIPVNATTFS 109


>XP_002325518.2 pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] EEE99899.2 pentatricopeptide
           repeat-containing family protein [Populus trichocarpa]
          Length = 678

 Score =  105 bits (262), Expect = 2e-23
 Identities = 54/110 (49%), Positives = 72/110 (65%)
 Frame = +1

Query: 148 SSYFHSLSPNPLNKYNNCHHFFKTKASNLYQSQTIRKQQKKRPSNSPAKSEGNFSEKDAF 327
           S + H    NPLN       F K K+S   Q+Q ++ Q       +P K    F E+DAF
Sbjct: 7   SLHLHCFPQNPLNINITHRQFSKIKSST--QTQPVQTQ-------NPNKKHQQFDERDAF 57

Query: 328 PKSLPLHTKNPYAIYNDIERFAKQNKLKEALTILDYLDKRGVPVNPTTFS 477
           P SLPLH KNP AIY DI+RF+++N+LK+AL I+DY+D++G+PVNPTTFS
Sbjct: 58  PASLPLHKKNPQAIYKDIQRFSRKNQLKDALIIMDYMDQQGIPVNPTTFS 107


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