BLASTX nr result

ID: Panax24_contig00037410 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00037410
         (570 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EOY12369.1 Uncharacterized protein TCM_030893 [Theobroma cacao]        45   2e-08
EOY12368.1 Uncharacterized protein TCM_030892 [Theobroma cacao]        50   1e-07
XP_003593988.2 transmembrane protein, putative [Medicago truncat...    42   3e-06
KMT11245.1 hypothetical protein BVRB_5g110720 [Beta vulgaris sub...    44   3e-06
XP_017979655.1 PREDICTED: F-box/kelch-repeat protein At1g57790 [...    54   3e-06

>EOY12369.1 Uncharacterized protein TCM_030893 [Theobroma cacao]
          Length = 729

 Score = 45.4 bits (106), Expect(3) = 2e-08
 Identities = 19/42 (45%), Positives = 27/42 (64%)
 Frame = -2

Query: 128 KLNHSTLKWEKVNSLGKHMIYICGTESFSAVAKISGMENKIY 3
           + ++ ++ W KV  LG +M ++    SFS VAK  GMENKIY
Sbjct: 640 EFDYPSMAWRKVRDLGNYMFFVSPPSSFSMVAKTPGMENKIY 681



 Score = 30.8 bits (68), Expect(3) = 2e-08
 Identities = 22/95 (23%), Positives = 41/95 (43%), Gaps = 3/95 (3%)
 Frame = -1

Query: 555 FFNPLTRAIIRLPKLVI---ACYXXXXXXXXXXXPDCILVVGLTSTIDLISPGQPEWRII 385
           F++P T+ +I +P LV+    C+             C++V   +S+I   +  + E    
Sbjct: 492 FYHPFTKKLISVPPLVVNLERCHSFGFTSLPTSPR-CLIVGISSSSIFYFNFSEDEGWFQ 550

Query: 384 FLDCNFRSDLLSSHKSPAFCGRNLYFFSSQGKLGV 280
           F   +  +  + +H +P       YF   QG LG+
Sbjct: 551 FERGDVPTAFIPNHTNPVLFEGAFYFLGQQGNLGI 585



 Score = 28.9 bits (63), Expect(3) = 2e-08
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = -3

Query: 238 PPQTCFPSCGQRFLVECNNNLISIVVGEFGKWVEVFK 128
           P + C  S  Q +L+EC+  L S+ V   G+ V+VF+
Sbjct: 605 PGKPC-KSFDQNYLLECDGKLCSVFVDNLGERVQVFE 640


>EOY12368.1 Uncharacterized protein TCM_030892 [Theobroma cacao]
          Length = 741

 Score = 50.1 bits (118), Expect(2) = 1e-07
 Identities = 22/45 (48%), Positives = 31/45 (68%)
 Frame = -2

Query: 137 SIQKLNHSTLKWEKVNSLGKHMIYICGTESFSAVAKISGMENKIY 3
           S+ +L+ +T+ W KV+ LG +M ++    SFS VAK  GMENKIY
Sbjct: 649 SVFELDKTTMAWRKVSDLGNYMFFVSTPSSFSMVAKTPGMENKIY 693



 Score = 33.1 bits (74), Expect(2) = 1e-07
 Identities = 27/107 (25%), Positives = 40/107 (37%), Gaps = 3/107 (2%)
 Frame = -1

Query: 555 FFNPLTRAIIRLPKLVI---ACYXXXXXXXXXXXPDCILVVGLTSTIDLISPGQPEWRII 385
           F+ P  + +I +P  ++    CY              I+ +   S + LI     EW   
Sbjct: 505 FYQPFAKKLIHVPPPLVNMDECYSFGFISSPTSPYCLIVGISSFSILCLIFLQDEEW--Y 562

Query: 384 FLDCNFRSDLLSSHKSPAFCGRNLYFFSSQGKLGVFRTGADGCEFLV 244
               N  S  + +H SP +     YF    G LGVF     G  +LV
Sbjct: 563 QFTRNDFSIFIPNHSSPVYFEGAFYFLGKHGNLGVFSVEDIGDVYLV 609


>XP_003593988.2 transmembrane protein, putative [Medicago truncatula] AES64239.2
           transmembrane protein, putative [Medicago truncatula]
          Length = 290

 Score = 41.6 bits (96), Expect(3) = 3e-06
 Identities = 20/44 (45%), Positives = 30/44 (68%)
 Frame = -2

Query: 143 G*SIQKLNHSTLKWEKVNSLGKHMIYICGTESFSAVAKISGMEN 12
           G  + KL+ ST+ W K+ SL  HM+++ G  SFSAVA I G+++
Sbjct: 205 GVRVFKLDESTMTWMKIESLKNHMLFV-GKTSFSAVANIPGLKS 247



 Score = 31.6 bits (70), Expect(3) = 3e-06
 Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = -3

Query: 235 PQTCFPSCGQRFLVECNNNLISIVVGEFGK-WVEVFK 128
           PQ    SC   FLVEC+ NL+++     GK  V VFK
Sbjct: 174 PQAPCSSCFNNFLVECDGNLLAVFEISLGKEGVRVFK 210



 Score = 24.3 bits (51), Expect(3) = 3e-06
 Identities = 32/122 (26%), Positives = 45/122 (36%), Gaps = 13/122 (10%)
 Frame = -1

Query: 555 FFNPLTRAIIRLP---KLV--IACYXXXXXXXXXXXPDCILV--------VGLTSTIDLI 415
           FFNP T+  + LP   K +  I C+            DC+ V        +   + +  +
Sbjct: 62  FFNPFTKEDLPLPFEHKRITNIRCFGMSHSPTSF---DCVTVQLDNGSSTITTVAYVHFL 118

Query: 414 SPGQPEWRIIFLDCNFRSDLLSSHKSPAFCGRNLYFFSSQGKLGVFRTGADGCEFLVHDP 235
           S G  + RI F D  F         SPAF     YF    GKL V         + V + 
Sbjct: 119 SEGVGD-RISFKDLTFPH----YSTSPAFHNGLFYFLILTGKLAVINPTRGEISWKVLEE 173

Query: 234 PK 229
           P+
Sbjct: 174 PQ 175


>KMT11245.1 hypothetical protein BVRB_5g110720 [Beta vulgaris subsp. vulgaris]
          Length = 709

 Score = 43.9 bits (102), Expect(2) = 3e-06
 Identities = 20/42 (47%), Positives = 23/42 (54%)
 Frame = -2

Query: 128 KLNHSTLKWEKVNSLGKHMIYICGTESFSAVAKISGMENKIY 3
           K NH   KW  V  LG H ++I    SFS VA   GM N+IY
Sbjct: 625 KFNHYNKKWTDVECLGNHSLFISHRSSFSVVATEEGMRNRIY 666



 Score = 34.3 bits (77), Expect(2) = 3e-06
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = -3

Query: 199 LVECNNNLISIVVGEFGKWVEVFK 128
           LV+CN  L+++ VG  G W++VFK
Sbjct: 602 LVDCNGELLAVFVGHKGAWIQVFK 625


>XP_017979655.1 PREDICTED: F-box/kelch-repeat protein At1g57790 [Theobroma cacao]
          Length = 378

 Score = 53.5 bits (127), Expect(2) = 3e-06
 Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 8/80 (10%)
 Frame = -2

Query: 218 VLWPTFPRGMQQQSY-INCCG*IWEM-------G*SIQKLNHSTLKWEKVNSLGKHMIYI 63
           +L PT P     Q++ + C G +  +       G  + KLNHS + W +V SLG +MIYI
Sbjct: 248 LLKPTRPCSSYHQNFLVECNGKLLSVFVGEFGKGVRVFKLNHSPMAWIEVESLGHYMIYI 307

Query: 62  CGTESFSAVAKISGMENKIY 3
             + S +A+A   GMENKIY
Sbjct: 308 SRSSSLAAMATAPGMENKIY 327



 Score = 24.6 bits (52), Expect(2) = 3e-06
 Identities = 29/117 (24%), Positives = 41/117 (35%), Gaps = 24/117 (20%)
 Frame = -1

Query: 552 FNPLTRAIIRLPK-----------LVIACYXXXXXXXXXXXPDCILVVGLTSTIDLISPG 406
           FNP TR I+  PK           +  +CY            DC++VV           G
Sbjct: 139 FNPFTRKIVPFPKDDIPYRFFTSYMGFSCY--------PTSSDCLVVVF----------G 180

Query: 405 QPEWRIIFL-----------DCNFRS--DLLSSHKSPAFCGRNLYFFSSQGKLGVFR 274
           Q  ++ ++L           D +F S  D +    SP F     Y     G LGV +
Sbjct: 181 QKFYQKVYLSYTRLGGQGWTDVDFHSSMDFVFCENSPVFYQGAFYCLGRGGNLGVLQ 237


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