BLASTX nr result

ID: Panax24_contig00037377 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00037377
         (512 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_002517698.1 PREDICTED: homoserine kinase [Ricinus communis] E...    40   4e-06
XP_015159391.1 PREDICTED: homoserine kinase-like [Solanum tubero...    45   4e-06
XP_015062516.1 PREDICTED: homoserine kinase-like [Solanum pennel...    45   4e-06

>XP_002517698.1 PREDICTED: homoserine kinase [Ricinus communis] EEF44862.1
           homoserine kinase, putative [Ricinus communis]
          Length = 367

 Score = 40.0 bits (92), Expect(2) = 4e-06
 Identities = 23/43 (53%), Positives = 25/43 (58%)
 Frame = -3

Query: 255 CAVDYLDDFVTPPVDAHVHPSPSEISIFEINSRQFFKKAQQRP 127
           CAVD L DFVT  VD  VH  P EISI EI+     KK  + P
Sbjct: 68  CAVDGLGDFVTVTVDPSVH--PGEISIAEISGTHASKKLSKNP 108



 Score = 37.7 bits (86), Expect(2) = 4e-06
 Identities = 18/27 (66%), Positives = 23/27 (85%)
 Frame = -1

Query: 119 NRAGIAVISIMRMLNIRSVGMSLSLHK 39
           N AGIA I+ M+MLN+RSVG+SL+L K
Sbjct: 111 NCAGIAGIATMKMLNVRSVGLSLTLEK 137


>XP_015159391.1 PREDICTED: homoserine kinase-like [Solanum tuberosum]
          Length = 365

 Score = 45.1 bits (105), Expect(2) = 4e-06
 Identities = 21/27 (77%), Positives = 25/27 (92%)
 Frame = -1

Query: 119 NRAGIAVISIMRMLNIRSVGMSLSLHK 39
           N AGIA IS+M+MLNIRSVG++LSLHK
Sbjct: 110 NCAGIAAISVMKMLNIRSVGLTLSLHK 136



 Score = 32.7 bits (73), Expect(2) = 4e-06
 Identities = 19/43 (44%), Positives = 27/43 (62%)
 Frame = -3

Query: 255 CAVDYLDDFVTPPVDAHVHPSPSEISIFEINSRQFFKKAQQRP 127
           CAVD + DFVT  +D +VH  P E+SI +I+     KK ++ P
Sbjct: 69  CAVDGIGDFVTLRLDPNVH--PGEVSISDISGAG--KKLRRNP 107


>XP_015062516.1 PREDICTED: homoserine kinase-like [Solanum pennellii]
          Length = 357

 Score = 45.1 bits (105), Expect(2) = 4e-06
 Identities = 21/27 (77%), Positives = 25/27 (92%)
 Frame = -1

Query: 119 NRAGIAVISIMRMLNIRSVGMSLSLHK 39
           N AGIA IS+M+MLNIRSVG++LSLHK
Sbjct: 102 NCAGIAAISVMKMLNIRSVGLTLSLHK 128



 Score = 32.7 bits (73), Expect(2) = 4e-06
 Identities = 19/43 (44%), Positives = 27/43 (62%)
 Frame = -3

Query: 255 CAVDYLDDFVTPPVDAHVHPSPSEISIFEINSRQFFKKAQQRP 127
           CAVD + DFVT  +D +VH  P E+SI +I+     KK ++ P
Sbjct: 61  CAVDGIGDFVTLRLDPNVH--PGEVSISDISGAG--KKLRRNP 99


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