BLASTX nr result
ID: Panax24_contig00037366
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax24_contig00037366
(414 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_011090804.1 PREDICTED: glycine-rich RNA-binding protein 3, mi... 103 2e-25
XP_016466408.1 PREDICTED: RNA-binding motif protein, Y chromosom... 103 2e-25
XP_009617118.1 PREDICTED: RNA-binding motif protein, Y chromosom... 103 2e-25
XP_019197683.1 PREDICTED: glycine-rich RNA-binding protein 2, mi... 103 2e-25
XP_016575277.1 PREDICTED: RNA-binding motif protein, Y chromosom... 102 5e-25
ERN12363.1 hypothetical protein AMTR_s00025p00095750 [Amborella ... 100 9e-25
XP_009799682.1 PREDICTED: nuclear cap-binding protein subunit 2 ... 101 2e-24
XP_019267010.1 PREDICTED: RNA-binding motif protein, Y chromosom... 100 2e-24
JAT46887.1 Cold-inducible RNA-binding protein [Anthurium amnicola] 100 4e-24
XP_006356681.1 PREDICTED: RNA-binding motif protein, Y chromosom... 100 5e-24
XP_010278458.1 PREDICTED: glycine-rich RNA-binding protein 4, mi... 99 8e-24
XP_017428691.1 PREDICTED: multiple RNA-binding domain-containing... 99 1e-23
XP_014508679.1 PREDICTED: multiple RNA-binding domain-containing... 98 2e-23
XP_004241058.1 PREDICTED: RNA-binding motif protein, Y chromosom... 98 3e-23
XP_015077733.1 PREDICTED: RNA-binding motif protein, Y chromosom... 97 5e-23
XP_010454165.2 PREDICTED: protein elav-like isoform X1 [Camelina... 97 8e-23
XP_010278468.1 PREDICTED: glycine-rich RNA-binding protein 4, mi... 95 2e-22
XP_017974386.1 PREDICTED: RNA-binding motif protein, X-linked 2 ... 96 2e-22
XP_006584061.1 PREDICTED: glycine-rich RNA-binding protein 4, mi... 95 3e-22
XP_010492940.1 PREDICTED: protein elav-like isoform X1 [Camelina... 95 5e-22
>XP_011090804.1 PREDICTED: glycine-rich RNA-binding protein 3, mitochondrial
[Sesamum indicum]
Length = 172
Score = 103 bits (258), Expect = 2e-25
Identities = 58/106 (54%), Positives = 71/106 (66%), Gaps = 3/106 (2%)
Frame = +2
Query: 104 QIAVHSTPNFSNATLQRPHCC--LSSASESVYISPSS-IIFVKGLPLSTFEGSLKTAFSQ 274
+I++ N +++ C LSS E PSS IIFVKGL ST EG LK AFSQ
Sbjct: 43 RISISDPATQINTPIRKAQFCSSLSSPGELDEGVPSSVIIFVKGLAQSTSEGGLKAAFSQ 102
Query: 275 FGEVTRVKIITDKKTRKSLGFAYVWFASREDAELAAKEMNGKFLDG 412
FGEV+RVK+ITDKKT++SLGFAYVWF E A A +E+NGKF +G
Sbjct: 103 FGEVSRVKVITDKKTKQSLGFAYVWFTREEHARAAVEEVNGKFFEG 148
>XP_016466408.1 PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
B-like isoform X2 [Nicotiana tabacum]
Length = 167
Score = 103 bits (257), Expect = 2e-25
Identities = 60/141 (42%), Positives = 84/141 (59%), Gaps = 4/141 (2%)
Frame = +2
Query: 2 FISPAIYSILSVESLRNFVVXXXXXXXXXXXXXXQIAVHSTPNFS-NATLQRPH---CCL 169
F SP ++ S+ S +F + + + TP S + + ++PH C
Sbjct: 4 FCSPCNKTLTSI-SFASFAIPKAFKSPYPPILSSEKVSNFTPRISIDLSQKKPHLPKCSD 62
Query: 170 SSASESVYISPSSIIFVKGLPLSTFEGSLKTAFSQFGEVTRVKIITDKKTRKSLGFAYVW 349
SSA + ++IIF+KGL ST EG LK FSQFG+V+RVKIITDK +++ LGFAY+W
Sbjct: 63 SSAEPDNTANSTTIIFLKGLAKSTAEGRLKVVFSQFGDVSRVKIITDKISKQPLGFAYIW 122
Query: 350 FASREDAELAAKEMNGKFLDG 412
F +E A+ A +EMNGKFLDG
Sbjct: 123 FPDKESAQSAVQEMNGKFLDG 143
>XP_009617118.1 PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
B isoform X2 [Nicotiana tomentosiformis]
Length = 167
Score = 103 bits (257), Expect = 2e-25
Identities = 60/141 (42%), Positives = 84/141 (59%), Gaps = 4/141 (2%)
Frame = +2
Query: 2 FISPAIYSILSVESLRNFVVXXXXXXXXXXXXXXQIAVHSTPNFS-NATLQRPH---CCL 169
F SP ++ S+ S +F + + + TP S + + ++PH C
Sbjct: 4 FCSPCNKTLTSI-SFASFAIPKAFKSPYPPILSSEKVSNFTPRISIDLSQKKPHLPKCSD 62
Query: 170 SSASESVYISPSSIIFVKGLPLSTFEGSLKTAFSQFGEVTRVKIITDKKTRKSLGFAYVW 349
SSA + ++IIF+KGL ST EG LK FSQFG+V+RVKIITDK +++ LGFAY+W
Sbjct: 63 SSAEPDNTANSTTIIFLKGLAKSTAEGRLKVVFSQFGDVSRVKIITDKISKQPLGFAYIW 122
Query: 350 FASREDAELAAKEMNGKFLDG 412
F +E A+ A +EMNGKFLDG
Sbjct: 123 FPDKESAQSAVQEMNGKFLDG 143
>XP_019197683.1 PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Ipomoea nil]
Length = 171
Score = 103 bits (257), Expect = 2e-25
Identities = 54/100 (54%), Positives = 70/100 (70%), Gaps = 3/100 (3%)
Frame = +2
Query: 122 TPNFSNATLQRPHCCLSSASE---SVYISPSSIIFVKGLPLSTFEGSLKTAFSQFGEVTR 292
+P + ++LQ PH CLSS S S ++IIF+KGLP ST E SLK AFS+FG+V R
Sbjct: 48 SPPVTKSSLQNPHLCLSSTSSLDPEDNASSNTIIFIKGLPKSTSEESLKVAFSKFGDVLR 107
Query: 293 VKIITDKKTRKSLGFAYVWFASREDAELAAKEMNGKFLDG 412
VKI+ DKKT++ L FA VWF++ E A AA EM+GKF +G
Sbjct: 108 VKILIDKKTKQPLSFANVWFSNEESAVSAADEMDGKFFNG 147
>XP_016575277.1 PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
A1-like isoform X1 [Capsicum annuum]
Length = 174
Score = 102 bits (255), Expect = 5e-25
Identities = 50/87 (57%), Positives = 66/87 (75%), Gaps = 1/87 (1%)
Frame = +2
Query: 155 PHCCLSSASE-SVYISPSSIIFVKGLPLSTFEGSLKTAFSQFGEVTRVKIITDKKTRKSL 331
P C SS + S + ++I+F+KGL ST EG LK FSQFG+V+RVKI+TDKK+++SL
Sbjct: 64 PKCYGSSVEQHSNDANSTTIVFLKGLAKSTLEGGLKVVFSQFGDVSRVKIVTDKKSKQSL 123
Query: 332 GFAYVWFASREDAELAAKEMNGKFLDG 412
GFAY+WF+ E A+ A +EMNGKFLDG
Sbjct: 124 GFAYIWFSDNESAQSAIQEMNGKFLDG 150
>ERN12363.1 hypothetical protein AMTR_s00025p00095750 [Amborella trichopoda]
Length = 121
Score = 100 bits (249), Expect = 9e-25
Identities = 48/84 (57%), Positives = 64/84 (76%)
Frame = +2
Query: 161 CCLSSASESVYISPSSIIFVKGLPLSTFEGSLKTAFSQFGEVTRVKIITDKKTRKSLGFA 340
C +S+ S SPS+ +F+KGL LST EG L AFSQFG+V RVK++TD+ +++SLGFA
Sbjct: 14 CRNNSSPISSDDSPSTRVFIKGLSLSTTEGYLTNAFSQFGKVDRVKVVTDRASKQSLGFA 73
Query: 341 YVWFASREDAELAAKEMNGKFLDG 412
Y+WF EDA+LA K+M+GKF DG
Sbjct: 74 YIWFTCEEDAKLAVKKMDGKFFDG 97
>XP_009799682.1 PREDICTED: nuclear cap-binding protein subunit 2 isoform X1
[Nicotiana sylvestris] XP_016463584.1 PREDICTED: nuclear
cap-binding protein subunit 2-like isoform X1 [Nicotiana
tabacum]
Length = 169
Score = 101 bits (251), Expect = 2e-24
Identities = 49/86 (56%), Positives = 63/86 (73%)
Frame = +2
Query: 155 PHCCLSSASESVYISPSSIIFVKGLPLSTFEGSLKTAFSQFGEVTRVKIITDKKTRKSLG 334
P C SS + ++IIF+KGL ST EG LK FSQFG+V+RVKIITDK +++ LG
Sbjct: 60 PKCSDSSVEPDNNTNSTTIIFLKGLAKSTAEGRLKVVFSQFGDVSRVKIITDKISKQPLG 119
Query: 335 FAYVWFASREDAELAAKEMNGKFLDG 412
FAY+WF+ +E A+ A +EMNGKFLDG
Sbjct: 120 FAYIWFSDKESAQSAVQEMNGKFLDG 145
>XP_019267010.1 PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
B-like isoform X2 [Nicotiana attenuata] OIT34671.1
glycine-rich rna-binding protein 8 [Nicotiana attenuata]
Length = 171
Score = 100 bits (250), Expect = 2e-24
Identities = 52/101 (51%), Positives = 70/101 (69%), Gaps = 4/101 (3%)
Frame = +2
Query: 122 TPNFS-NATLQRPH---CCLSSASESVYISPSSIIFVKGLPLSTFEGSLKTAFSQFGEVT 289
TP S + + ++PH C SS + ++IIF+KGL ST EG LK FSQFG+V+
Sbjct: 47 TPRISIDLSQKKPHLPKCSDSSVEPDNTANSTTIIFLKGLAKSTAEGRLKVVFSQFGDVS 106
Query: 290 RVKIITDKKTRKSLGFAYVWFASREDAELAAKEMNGKFLDG 412
RVKI+TDK +++ LGFAY+WF +E A+ A +EMNGKFLDG
Sbjct: 107 RVKIVTDKISKQPLGFAYIWFLDKESAQCAVQEMNGKFLDG 147
>JAT46887.1 Cold-inducible RNA-binding protein [Anthurium amnicola]
Length = 175
Score = 100 bits (249), Expect = 4e-24
Identities = 49/71 (69%), Positives = 57/71 (80%)
Frame = +2
Query: 200 PSSIIFVKGLPLSTFEGSLKTAFSQFGEVTRVKIITDKKTRKSLGFAYVWFASREDAELA 379
P + IF+KGLP ST EG+L FSQFG VTRVKIIT K + +SLG AYVWFAS EDA+ A
Sbjct: 81 PRNRIFIKGLPSSTSEGTLGKTFSQFGHVTRVKIITSKISEQSLGLAYVWFASEEDAQFA 140
Query: 380 AKEMNGKFLDG 412
AKEM+GKF+DG
Sbjct: 141 AKEMDGKFVDG 151
>XP_006356681.1 PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
B-like isoform X1 [Solanum tuberosum]
Length = 168
Score = 100 bits (248), Expect = 5e-24
Identities = 47/70 (67%), Positives = 58/70 (82%)
Frame = +2
Query: 203 SSIIFVKGLPLSTFEGSLKTAFSQFGEVTRVKIITDKKTRKSLGFAYVWFASREDAELAA 382
++IIF+KGL ST EG LK FSQFG+V+RVKIITDKK+++SLGFAY+WF E A+ A
Sbjct: 75 TTIIFLKGLAKSTPEGRLKVVFSQFGDVSRVKIITDKKSKESLGFAYIWFPDNESAQAAV 134
Query: 383 KEMNGKFLDG 412
+EMNGKFLDG
Sbjct: 135 QEMNGKFLDG 144
>XP_010278458.1 PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial
isoform X1 [Nelumbo nucifera]
Length = 161
Score = 99.4 bits (246), Expect = 8e-24
Identities = 54/96 (56%), Positives = 64/96 (66%), Gaps = 1/96 (1%)
Frame = +2
Query: 128 NFSNATLQRPHCCLSSASESVYISPSSI-IFVKGLPLSTFEGSLKTAFSQFGEVTRVKII 304
N N+ L CC SS S SS IF+KGLPLS EG L +FS +GEV +VKII
Sbjct: 42 NRCNSALPNIRCCSSSGSSVEAEKYSSTRIFIKGLPLSMSEGCLMKSFSCYGEVRKVKII 101
Query: 305 TDKKTRKSLGFAYVWFASREDAELAAKEMNGKFLDG 412
TD+K+R+SLG AYVWFAS E A+LA EM+GKF G
Sbjct: 102 TDRKSRQSLGLAYVWFASEESAQLAVAEMDGKFFGG 137
>XP_017428691.1 PREDICTED: multiple RNA-binding domain-containing protein 1 [Vigna
angularis]
Length = 161
Score = 99.0 bits (245), Expect = 1e-23
Identities = 54/102 (52%), Positives = 69/102 (67%), Gaps = 4/102 (3%)
Frame = +2
Query: 119 STPNFSNATLQR--PHCCLSSASESVY--ISPSSIIFVKGLPLSTFEGSLKTAFSQFGEV 286
S+P+FS + R CC SSA+ SV +S S+ IFVKGLP ST EG L FS+FG V
Sbjct: 36 SSPSFSTSAPLRNASFCCSSSATSSVEPDLSSSAKIFVKGLPHSTSEGRLMKVFSEFGVV 95
Query: 287 TRVKIITDKKTRKSLGFAYVWFASREDAELAAKEMNGKFLDG 412
V++ D+K+ KSLGFA++WF E A+LA +EMNGKF DG
Sbjct: 96 NLVQLPIDEKSGKSLGFAFIWFVKEESAQLAVQEMNGKFFDG 137
>XP_014508679.1 PREDICTED: multiple RNA-binding domain-containing protein 1 [Vigna
radiata var. radiata]
Length = 161
Score = 98.2 bits (243), Expect = 2e-23
Identities = 53/102 (51%), Positives = 68/102 (66%), Gaps = 4/102 (3%)
Frame = +2
Query: 119 STPNFSNAT--LQRPHCCLSSASESVY--ISPSSIIFVKGLPLSTFEGSLKTAFSQFGEV 286
S+P+FS + CC SA+ SV +S S+ IFVKGLP ST EG L FS+FGEV
Sbjct: 36 SSPSFSTSAPLSYASFCCSCSATSSVEPDLSSSAKIFVKGLPHSTSEGRLMKVFSEFGEV 95
Query: 287 TRVKIITDKKTRKSLGFAYVWFASREDAELAAKEMNGKFLDG 412
V++ D+K+ KSLGFA++WF E A+LA +EMNGKF DG
Sbjct: 96 NLVQLPIDEKSGKSLGFAFIWFVKEESAQLAVQEMNGKFFDG 137
>XP_004241058.1 PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
B isoform X2 [Solanum lycopersicum]
Length = 168
Score = 98.2 bits (243), Expect = 3e-23
Identities = 46/70 (65%), Positives = 56/70 (80%)
Frame = +2
Query: 203 SSIIFVKGLPLSTFEGSLKTAFSQFGEVTRVKIITDKKTRKSLGFAYVWFASREDAELAA 382
++IIF+KGL ST EG LK FSQFG V RVKI+TDKK+++SLGFAY+WF E A+ A
Sbjct: 75 TTIIFLKGLAKSTPEGRLKVVFSQFGNVNRVKIVTDKKSKESLGFAYIWFPDNESAQSAI 134
Query: 383 KEMNGKFLDG 412
+EMNGKFLDG
Sbjct: 135 REMNGKFLDG 144
>XP_015077733.1 PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
A1-like isoform X2 [Solanum pennellii]
Length = 168
Score = 97.4 bits (241), Expect = 5e-23
Identities = 46/70 (65%), Positives = 56/70 (80%)
Frame = +2
Query: 203 SSIIFVKGLPLSTFEGSLKTAFSQFGEVTRVKIITDKKTRKSLGFAYVWFASREDAELAA 382
++IIF+KGL ST EG LK FSQFG V RVKI+TDKK+++SLGFAY+WF E A+ A
Sbjct: 75 TTIIFLKGLAKSTPEGRLKVVFSQFGNVNRVKILTDKKSKESLGFAYIWFPDNESAQSAI 134
Query: 383 KEMNGKFLDG 412
+EMNGKFLDG
Sbjct: 135 EEMNGKFLDG 144
>XP_010454165.2 PREDICTED: protein elav-like isoform X1 [Camelina sativa]
Length = 186
Score = 97.4 bits (241), Expect = 8e-23
Identities = 46/72 (63%), Positives = 57/72 (79%)
Frame = +2
Query: 197 SPSSIIFVKGLPLSTFEGSLKTAFSQFGEVTRVKIITDKKTRKSLGFAYVWFASREDAEL 376
SPS+ IFVKGLP S EG LK FS+FG V+ VKII +++TR+SLG+ YVWF S+EDA+L
Sbjct: 86 SPSTSIFVKGLPDSVSEGRLKRVFSEFGRVSNVKIIVNERTRQSLGYGYVWFNSKEDAQL 145
Query: 377 AAKEMNGKFLDG 412
A + MNGKF DG
Sbjct: 146 AVEAMNGKFFDG 157
>XP_010278468.1 PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial
isoform X2 [Nelumbo nucifera]
Length = 142
Score = 95.1 bits (235), Expect = 2e-22
Identities = 52/92 (56%), Positives = 62/92 (67%), Gaps = 1/92 (1%)
Frame = +2
Query: 128 NFSNATLQRPHCCLSSASESVYISPSSI-IFVKGLPLSTFEGSLKTAFSQFGEVTRVKII 304
N N+ L CC SS S SS IF+KGLPLS EG L +FS +GEV +VKII
Sbjct: 42 NRCNSALPNIRCCSSSGSSVEAEKYSSTRIFIKGLPLSMSEGCLMKSFSCYGEVRKVKII 101
Query: 305 TDKKTRKSLGFAYVWFASREDAELAAKEMNGK 400
TD+K+R+SLG AYVWFAS E A+LA EM+GK
Sbjct: 102 TDRKSRQSLGLAYVWFASEESAQLAVAEMDGK 133
>XP_017974386.1 PREDICTED: RNA-binding motif protein, X-linked 2 isoform X2
[Theobroma cacao]
Length = 159
Score = 95.5 bits (236), Expect = 2e-22
Identities = 46/88 (52%), Positives = 64/88 (72%), Gaps = 1/88 (1%)
Frame = +2
Query: 152 RPHCCLSSASESV-YISPSSIIFVKGLPLSTFEGSLKTAFSQFGEVTRVKIITDKKTRKS 328
+P CC S+S+S + S S+ +F+KGLP ST EG LK FSQFGEV +V ++ ++ +++S
Sbjct: 48 QPICCSYSSSQSESHSSTSAGVFIKGLPQSTAEGRLKRVFSQFGEVKQVNVVRERVSKQS 107
Query: 329 LGFAYVWFASREDAELAAKEMNGKFLDG 412
LG A+VWF + A+LA KEMNGKF DG
Sbjct: 108 LGSAFVWFDEEQSAQLAVKEMNGKFFDG 135
>XP_006584061.1 PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
[Glycine max] KRH51016.1 hypothetical protein
GLYMA_07G256600 [Glycine max]
Length = 157
Score = 95.1 bits (235), Expect = 3e-22
Identities = 47/84 (55%), Positives = 60/84 (71%)
Frame = +2
Query: 161 CCLSSASESVYISPSSIIFVKGLPLSTFEGSLKTAFSQFGEVTRVKIITDKKTRKSLGFA 340
CC SS ++ SP IFVKGLPLST EG L FS+FG+VT V++ D+++ +SLGFA
Sbjct: 52 CCTSSVHCNLPSSPK--IFVKGLPLSTSEGRLMKVFSEFGDVTLVQLPIDRESGQSLGFA 109
Query: 341 YVWFASREDAELAAKEMNGKFLDG 412
Y+WF E A+LA +EMNGKF DG
Sbjct: 110 YIWFVKEESAQLAVQEMNGKFFDG 133
>XP_010492940.1 PREDICTED: protein elav-like isoform X1 [Camelina sativa]
Length = 174
Score = 95.1 bits (235), Expect = 5e-22
Identities = 44/72 (61%), Positives = 56/72 (77%)
Frame = +2
Query: 197 SPSSIIFVKGLPLSTFEGSLKTAFSQFGEVTRVKIITDKKTRKSLGFAYVWFASREDAEL 376
SPS+ +FVKGLP S EG LK FS+FG V+ VKII +++TR+SLG+ YVWF +EDA+L
Sbjct: 74 SPSTSVFVKGLPDSVSEGRLKRVFSEFGHVSNVKIIVNERTRQSLGYGYVWFNRKEDAQL 133
Query: 377 AAKEMNGKFLDG 412
A + MNGKF DG
Sbjct: 134 AVEAMNGKFFDG 145