BLASTX nr result

ID: Panax24_contig00036934 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00036934
         (421 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_011461117.1 PREDICTED: uncharacterized protein LOC101293573 [...    67   2e-10
KVH99088.1 Mitochodrial transcription termination factor-related...    63   8e-09
XP_018810626.1 PREDICTED: uncharacterized protein LOC108983443 [...    59   1e-08
XP_002529053.1 PREDICTED: uncharacterized protein LOC8277584 [Ri...    61   4e-08
CBI26741.3 unnamed protein product, partial [Vitis vinifera]           59   1e-07
XP_002276224.1 PREDICTED: transcription termination factor MTERF...    59   1e-07
XP_018812762.1 PREDICTED: transcription termination factor MTERF...    59   1e-07
XP_009346771.1 PREDICTED: transcription termination factor MTERF...    59   2e-07
XP_003617710.2 transcription termination factor family protein [...    59   2e-07
XP_010252697.1 PREDICTED: transcription termination factor MTERF...    59   2e-07
XP_017244139.1 PREDICTED: transcription termination factor MTERF...    57   1e-06
XP_017185579.1 PREDICTED: transcription termination factor MTERF...    57   1e-06
XP_008364198.1 PREDICTED: transcription termination factor MTERF...    57   1e-06
ONI13631.1 hypothetical protein PRUPE_4G234400 [Prunus persica]        55   4e-06
ONI13632.1 hypothetical protein PRUPE_4G234400 [Prunus persica] ...    55   4e-06
XP_008244559.1 PREDICTED: uncharacterized protein LOC103342698 [...    55   4e-06
XP_007214082.1 hypothetical protein PRUPE_ppa015320mg [Prunus pe...    55   5e-06
XP_004251918.1 PREDICTED: transcription termination factor MTERF...    54   7e-06
XP_006344885.1 PREDICTED: uncharacterized protein LOC102594087 [...    54   7e-06
GAU28386.1 hypothetical protein TSUD_257140 [Trifolium subterran...    54   7e-06

>XP_011461117.1 PREDICTED: uncharacterized protein LOC101293573 [Fragaria vesca
           subsp. vesca]
          Length = 488

 Score = 67.4 bits (163), Expect = 2e-10
 Identities = 36/69 (52%), Positives = 45/69 (65%)
 Frame = +3

Query: 120 LYPFNYTTVRPSNSPNLCSSRTLKFHLQQLILRRRRSCSFKVSVVSSHSNPKILKSNRRS 299
           + PF+     PS+SP L  S      L  L  R+RR+ S +  V+S+HSNPKILKSNRRS
Sbjct: 1   MVPFSLCPSHPSSSPQLYLSHFTVTTLSDLSGRKRRAGSCRFVVLSTHSNPKILKSNRRS 60

Query: 300 RFGQTLSPY 326
           R+GQ LSPY
Sbjct: 61  RYGQPLSPY 69


>KVH99088.1 Mitochodrial transcription termination factor-related protein
           [Cynara cardunculus var. scolymus]
          Length = 489

 Score = 62.8 bits (151), Expect = 8e-09
 Identities = 38/73 (52%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
 Frame = +3

Query: 117 SLYPFNYTTVRPSNSPNLCSSRTLKFHLQQLI---LRRRRSCSFKVSVVSSHSNPKILKS 287
           SLYP N        +P+     TLK +L   +    RRRR  S + +V SSHSNPKILKS
Sbjct: 5   SLYPSNSLLNSLFPNPSSTYFETLKVYLHDGLNSPRRRRRRTSGRFAVSSSHSNPKILKS 64

Query: 288 NRRSRFGQTLSPY 326
           NRRSRFG+ LSPY
Sbjct: 65  NRRSRFGRRLSPY 77


>XP_018810626.1 PREDICTED: uncharacterized protein LOC108983443 [Juglans regia]
          Length = 132

 Score = 59.3 bits (142), Expect = 1e-08
 Identities = 35/78 (44%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
 Frame = +3

Query: 102 MTTTFSLYPFNYTTVRPSNSPNLCSSRTLKFHLQQLI---LRRRRSCSFKVSVVSSHSNP 272
           M +  SLYPFN T   P  S N+  +  +      LI   + +RRS   +  V S+HS+P
Sbjct: 1   MASFLSLYPFNTT---PPFSLNVFDTHLIVQSFSSLIGEGIVKRRSSGHRFEVRSTHSSP 57

Query: 273 KILKSNRRSRFGQTLSPY 326
           +ILKSNRRSR+GQ LSP+
Sbjct: 58  RILKSNRRSRYGQALSPF 75


>XP_002529053.1 PREDICTED: uncharacterized protein LOC8277584 [Ricinus communis]
           XP_015580762.1 PREDICTED: uncharacterized protein
           LOC8277584 [Ricinus communis] EEF33364.1 conserved
           hypothetical protein [Ricinus communis]
          Length = 508

 Score = 60.8 bits (146), Expect = 4e-08
 Identities = 36/75 (48%), Positives = 48/75 (64%), Gaps = 6/75 (8%)
 Frame = +3

Query: 120 LYPFNYTTVRPSNSPNL------CSSRTLKFHLQQLILRRRRSCSFKVSVVSSHSNPKIL 281
           +YPFN  T+   + P+L        S+  +F+  +   RRR   S K+ V+S+HSN KIL
Sbjct: 6   MYPFNNPTL--PSQPHLFLHSVSSESKMREFYYIEDRRRRRSRVSSKLVVLSTHSNAKIL 63

Query: 282 KSNRRSRFGQTLSPY 326
           KSNR+SRFGQTLSPY
Sbjct: 64  KSNRKSRFGQTLSPY 78


>CBI26741.3 unnamed protein product, partial [Vitis vinifera]
          Length = 480

 Score = 59.3 bits (142), Expect = 1e-07
 Identities = 32/73 (43%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
 Frame = +3

Query: 111 TFSLYPFNYTTVRPSNSPNLCSSRTLKFHLQQLILRRRRSCSFK-VSVVSSHSNPKILKS 287
           TF+L P +++    SN  +L +  ++   +     +RR SC     +V+S+HSNP+ILKS
Sbjct: 8   TFNLIPHSHSPSASSNPDSLSNLNSISAKID----KRRSSCRTSGFTVLSTHSNPRILKS 63

Query: 288 NRRSRFGQTLSPY 326
           NRRSR+GQ LSPY
Sbjct: 64  NRRSRYGQVLSPY 76


>XP_002276224.1 PREDICTED: transcription termination factor MTERF9, chloroplastic
           [Vitis vinifera] XP_010644524.1 PREDICTED: transcription
           termination factor MTERF9, chloroplastic [Vitis
           vinifera] XP_010644525.1 PREDICTED: transcription
           termination factor MTERF9, chloroplastic [Vitis
           vinifera]
          Length = 514

 Score = 59.3 bits (142), Expect = 1e-07
 Identities = 32/73 (43%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
 Frame = +3

Query: 111 TFSLYPFNYTTVRPSNSPNLCSSRTLKFHLQQLILRRRRSCSFK-VSVVSSHSNPKILKS 287
           TF+L P +++    SN  +L +  ++   +     +RR SC     +V+S+HSNP+ILKS
Sbjct: 8   TFNLIPHSHSPSASSNPDSLSNLNSISAKID----KRRSSCRTSGFTVLSTHSNPRILKS 63

Query: 288 NRRSRFGQTLSPY 326
           NRRSR+GQ LSPY
Sbjct: 64  NRRSRYGQVLSPY 76


>XP_018812762.1 PREDICTED: transcription termination factor MTERF9,
           chloroplastic-like [Juglans regia]
          Length = 528

 Score = 59.3 bits (142), Expect = 1e-07
 Identities = 35/78 (44%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
 Frame = +3

Query: 102 MTTTFSLYPFNYTTVRPSNSPNLCSSRTLKFHLQQLI---LRRRRSCSFKVSVVSSHSNP 272
           M +  SLYPFN T   P  S N+  +  +      LI   + +RRS   +  V S+HS+P
Sbjct: 1   MASFLSLYPFNTT---PPFSLNVFDTHLIVQSFSSLIGEGIVKRRSSGHRFEVRSTHSSP 57

Query: 273 KILKSNRRSRFGQTLSPY 326
           +ILKSNRRSR+GQ LSP+
Sbjct: 58  RILKSNRRSRYGQALSPF 75


>XP_009346771.1 PREDICTED: transcription termination factor MTERF9, chloroplastic
           [Pyrus x bretschneideri] XP_018500787.1 PREDICTED:
           transcription termination factor MTERF9, chloroplastic
           [Pyrus x bretschneideri]
          Length = 501

 Score = 58.9 bits (141), Expect = 2e-07
 Identities = 35/72 (48%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
 Frame = +3

Query: 114 FSLYPFNYTTVRPSNSPNLCSSRTLKFHLQQLILRRRRS-CSFKVSVVSSHSNPKILKSN 290
           FSL P ++++   S       S+ +   L  L  R+RRS  S +  V+S+HSNPKILKSN
Sbjct: 4   FSLCPSSHSSSSSSCLKLFSQSQFIITTLSNLSARKRRSDSSCRFVVLSTHSNPKILKSN 63

Query: 291 RRSRFGQTLSPY 326
           RRSR+GQ LSPY
Sbjct: 64  RRSRYGQPLSPY 75


>XP_003617710.2 transcription termination factor family protein [Medicago
           truncatula] AET00669.2 transcription termination factor
           family protein [Medicago truncatula]
          Length = 503

 Score = 58.5 bits (140), Expect = 2e-07
 Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 5/80 (6%)
 Frame = +3

Query: 102 MTTTF-SLYPFNYTTVRPSNSPN----LCSSRTLKFHLQQLILRRRRSCSFKVSVVSSHS 266
           M TTF SLYP+N   + P  S N     CSS +  F      L+RR     K +V+S+HS
Sbjct: 1   MATTFLSLYPYNPFNILPFPSSNHASASCSSSSSSF------LKRR-----KFTVLSAHS 49

Query: 267 NPKILKSNRRSRFGQTLSPY 326
           NPKILK+NR+S +G+ LSPY
Sbjct: 50  NPKILKTNRKSTYGKFLSPY 69


>XP_010252697.1 PREDICTED: transcription termination factor MTERF9, chloroplastic
           isoform X1 [Nelumbo nucifera] XP_010252698.1 PREDICTED:
           transcription termination factor MTERF9, chloroplastic
           isoform X1 [Nelumbo nucifera]
          Length = 520

 Score = 58.5 bits (140), Expect = 2e-07
 Identities = 33/74 (44%), Positives = 47/74 (63%), Gaps = 4/74 (5%)
 Frame = +3

Query: 117 SLYPFNY----TTVRPSNSPNLCSSRTLKFHLQQLILRRRRSCSFKVSVVSSHSNPKILK 284
           SL+ FN     ++   S++ NL  S      L   I++ RR+C+     +S+HSNP+ILK
Sbjct: 5   SLHVFNSYFLSSSTHSSSARNLSRSHFGSEVLVNSIIKGRRNCTSVFVALSTHSNPRILK 64

Query: 285 SNRRSRFGQTLSPY 326
           SNRRSR+GQ+LSPY
Sbjct: 65  SNRRSRYGQSLSPY 78


>XP_017244139.1 PREDICTED: transcription termination factor MTERF9, chloroplastic
           [Daucus carota subsp. sativus] XP_017244140.1 PREDICTED:
           transcription termination factor MTERF9, chloroplastic
           [Daucus carota subsp. sativus] KZM99423.1 hypothetical
           protein DCAR_013215 [Daucus carota subsp. sativus]
          Length = 492

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 32/75 (42%), Positives = 39/75 (52%)
 Frame = +3

Query: 102 MTTTFSLYPFNYTTVRPSNSPNLCSSRTLKFHLQQLILRRRRSCSFKVSVVSSHSNPKIL 281
           M+T+ SL   NY+    S  P   SS         +I   RR    K  V+SSHSNPK++
Sbjct: 1   MSTSTSLCCCNYSAAASSLPPASSSSPATTPQFNSIIQTSRRRNELKCGVISSHSNPKLI 60

Query: 282 KSNRRSRFGQTLSPY 326
           K N RS FG  LSPY
Sbjct: 61  KPNLRSTFGHPLSPY 75


>XP_017185579.1 PREDICTED: transcription termination factor MTERF9,
           chloroplastic-like [Malus domestica] XP_017185580.1
           PREDICTED: transcription termination factor MTERF9,
           chloroplastic-like [Malus domestica] XP_017185581.1
           PREDICTED: transcription termination factor MTERF9,
           chloroplastic-like [Malus domestica] XP_017185582.1
           PREDICTED: transcription termination factor MTERF9,
           chloroplastic-like [Malus domestica]
          Length = 501

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 34/72 (47%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
 Frame = +3

Query: 114 FSLYPFNYTTVRPSNSPNLCSSRTLKFHLQQLILRRRRS-CSFKVSVVSSHSNPKILKSN 290
           FSL P ++++   S       S+ +   L  L  R+RRS  S +  V+S+HSNPKILKSN
Sbjct: 4   FSLCPSSHSSSSSSCLKLFSQSQFIITTLSNLSGRKRRSNSSCRFVVLSTHSNPKILKSN 63

Query: 291 RRSRFGQTLSPY 326
           RRSR+GQ L+PY
Sbjct: 64  RRSRYGQPLTPY 75


>XP_008364198.1 PREDICTED: transcription termination factor MTERF9,
           chloroplastic-like [Malus domestica] XP_008364206.1
           PREDICTED: transcription termination factor MTERF9,
           chloroplastic-like [Malus domestica] XP_008364212.1
           PREDICTED: transcription termination factor MTERF9,
           chloroplastic-like [Malus domestica]
          Length = 501

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 34/72 (47%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
 Frame = +3

Query: 114 FSLYPFNYTTVRPSNSPNLCSSRTLKFHLQQLILRRRRS-CSFKVSVVSSHSNPKILKSN 290
           FSL P ++++   S       S+ +   L  L  R+RRS  S +  V+S+HSNPKILKSN
Sbjct: 4   FSLCPSSHSSSSSSCLKLFSQSQFIITTLSNLSGRKRRSNSSCRFVVLSTHSNPKILKSN 63

Query: 291 RRSRFGQTLSPY 326
           RRSR+GQ L+PY
Sbjct: 64  RRSRYGQPLTPY 75


>ONI13631.1 hypothetical protein PRUPE_4G234400 [Prunus persica]
          Length = 427

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 29/44 (65%), Positives = 35/44 (79%), Gaps = 1/44 (2%)
 Frame = +3

Query: 198 LQQLILRRRRS-CSFKVSVVSSHSNPKILKSNRRSRFGQTLSPY 326
           L  L  R+RRS  S ++ V+S+HSNPKILKSNRRSR+GQ LSPY
Sbjct: 31  LSSLCGRKRRSGSSCRLVVLSTHSNPKILKSNRRSRYGQPLSPY 74


>ONI13632.1 hypothetical protein PRUPE_4G234400 [Prunus persica] ONI13633.1
           hypothetical protein PRUPE_4G234400 [Prunus persica]
           ONI13634.1 hypothetical protein PRUPE_4G234400 [Prunus
           persica]
          Length = 496

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 29/44 (65%), Positives = 35/44 (79%), Gaps = 1/44 (2%)
 Frame = +3

Query: 198 LQQLILRRRRS-CSFKVSVVSSHSNPKILKSNRRSRFGQTLSPY 326
           L  L  R+RRS  S ++ V+S+HSNPKILKSNRRSR+GQ LSPY
Sbjct: 31  LSSLCGRKRRSGSSCRLVVLSTHSNPKILKSNRRSRYGQPLSPY 74


>XP_008244559.1 PREDICTED: uncharacterized protein LOC103342698 [Prunus mume]
          Length = 496

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 29/44 (65%), Positives = 35/44 (79%), Gaps = 1/44 (2%)
 Frame = +3

Query: 198 LQQLILRRRRS-CSFKVSVVSSHSNPKILKSNRRSRFGQTLSPY 326
           L  L  R+RRS  S ++ V+S+HSNPKILKSNRRSR+GQ LSPY
Sbjct: 31  LSSLCGRKRRSGSSCRLVVLSTHSNPKILKSNRRSRYGQPLSPY 74


>XP_007214082.1 hypothetical protein PRUPE_ppa015320mg [Prunus persica]
          Length = 445

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 30/48 (62%), Positives = 33/48 (68%)
 Frame = +3

Query: 183 TLKFHLQQLILRRRRSCSFKVSVVSSHSNPKILKSNRRSRFGQTLSPY 326
           TL FHL  L L  R +  F     S+HSNPKILKSNRRSR+GQ LSPY
Sbjct: 45  TLDFHLGPLRLPSRGALKF-----STHSNPKILKSNRRSRYGQPLSPY 87


>XP_004251918.1 PREDICTED: transcription termination factor MTERF9, chloroplastic
           [Solanum lycopersicum]
          Length = 482

 Score = 54.3 bits (129), Expect = 7e-06
 Identities = 28/41 (68%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
 Frame = +3

Query: 213 LRRRRSCSFKVS---VVSSHSNPKILKSNRRSRFGQTLSPY 326
           +  R+SC FK S   VVSSH+NPKILK NRRSRFGQ LS Y
Sbjct: 31  ISNRKSCFFKFSRICVVSSHTNPKILKPNRRSRFGQPLSTY 71


>XP_006344885.1 PREDICTED: uncharacterized protein LOC102594087 [Solanum tuberosum]
          Length = 485

 Score = 54.3 bits (129), Expect = 7e-06
 Identities = 27/41 (65%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
 Frame = +3

Query: 213 LRRRRSCSFKVS---VVSSHSNPKILKSNRRSRFGQTLSPY 326
           +R R+SC F+ S   VVSSH+NPKILK  RRSR+GQ LSPY
Sbjct: 30  VRSRKSCFFRFSRICVVSSHTNPKILKPKRRSRYGQPLSPY 70


>GAU28386.1 hypothetical protein TSUD_257140 [Trifolium subterraneum]
          Length = 496

 Score = 54.3 bits (129), Expect = 7e-06
 Identities = 33/75 (44%), Positives = 43/75 (57%)
 Frame = +3

Query: 102 MTTTFSLYPFNYTTVRPSNSPNLCSSRTLKFHLQQLILRRRRSCSFKVSVVSSHSNPKIL 281
           M T  SLYP+N     P+ S N        +      LRR      K +V+SSHSNPKIL
Sbjct: 1   MATFSSLYPYNPMFFVPTPSSN--------YPFASSFLRRS-----KFTVLSSHSNPKIL 47

Query: 282 KSNRRSRFGQTLSPY 326
           K+NR+S +G+T+SPY
Sbjct: 48  KTNRKSIYGKTISPY 62


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