BLASTX nr result
ID: Panax24_contig00036884
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax24_contig00036884
(547 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
JAU70647.1 Transposon Ty3-I Gag-Pol polyprotein, partial [Noccae... 126 2e-34
JAU67440.1 Transposon Ty3-I Gag-Pol polyprotein, partial [Noccae... 126 3e-34
XP_015582137.1 PREDICTED: RNA-directed DNA polymerase homolog, p... 125 2e-33
XP_015899815.1 PREDICTED: RNA-directed DNA polymerase homolog, p... 124 1e-32
XP_015579650.1 PREDICTED: RNA-directed DNA polymerase homolog, p... 123 6e-32
XP_015877367.1 PREDICTED: RNA-directed DNA polymerase homolog, p... 121 2e-31
XP_012841286.1 PREDICTED: uncharacterized protein LOC105961600 [... 128 3e-31
JAU30217.1 Transposon Ty3-I Gag-Pol polyprotein, partial [Noccae... 119 3e-31
XP_015387373.1 PREDICTED: uncharacterized protein LOC102617792 [... 127 4e-31
XP_013751668.1 PREDICTED: RNA-directed DNA polymerase homolog [B... 120 7e-31
XP_012437514.1 PREDICTED: uncharacterized protein LOC105763728 [... 127 7e-31
XP_016733639.1 PREDICTED: uncharacterized protein LOC107944326 [... 125 1e-30
XP_012448725.1 PREDICTED: uncharacterized protein LOC105771893 [... 126 1e-30
XP_017630112.1 PREDICTED: uncharacterized protein LOC108473056 [... 126 2e-30
JAU38382.1 Transposon Ty3-I Gag-Pol polyprotein, partial [Noccae... 122 2e-30
XP_012844427.1 PREDICTED: uncharacterized protein K02A2.6-like [... 126 2e-30
XP_016480216.1 PREDICTED: uncharacterized protein LOC107801400 [... 124 3e-30
XP_019057164.1 PREDICTED: uncharacterized protein LOC109116372 [... 125 3e-30
OMO50706.1 reverse transcriptase [Corchorus capsularis] 125 3e-30
XP_010430869.1 PREDICTED: uncharacterized protein LOC104715125 [... 120 4e-30
>JAU70647.1 Transposon Ty3-I Gag-Pol polyprotein, partial [Noccaea
caerulescens]
Length = 115
Score = 126 bits (316), Expect = 2e-34
Identities = 56/79 (70%), Positives = 67/79 (84%)
Frame = +3
Query: 309 IRGIKHQINFVLSVTNPNHPAYQSNPEENMELQRQVDKLMGKGFVRESMSPCAVSVILVP 488
+RGI+HQI+FV PN PAY++NP E ELQRQVD+LM KG++RESMSPCAV V+LVP
Sbjct: 12 VRGIEHQIDFVPGSALPNRPAYRTNPVETKELQRQVDELMEKGYIRESMSPCAVPVLLVP 71
Query: 489 KKDGKWRMCIDCRAVNNIT 545
KKDG WRMC+DCRA+NNIT
Sbjct: 72 KKDGSWRMCVDCRAINNIT 90
>JAU67440.1 Transposon Ty3-I Gag-Pol polyprotein, partial [Noccaea
caerulescens]
Length = 116
Score = 126 bits (316), Expect = 3e-34
Identities = 56/79 (70%), Positives = 67/79 (84%)
Frame = +3
Query: 309 IRGIKHQINFVLSVTNPNHPAYQSNPEENMELQRQVDKLMGKGFVRESMSPCAVSVILVP 488
+RGI+HQI+FV T PN PAY++NP E ELQRQ+D+LM KG +RESMSPCAV V+LVP
Sbjct: 21 VRGIEHQIDFVPGSTLPNRPAYRTNPVETKELQRQIDELMEKGHIRESMSPCAVPVLLVP 80
Query: 489 KKDGKWRMCIDCRAVNNIT 545
KKDG WRMC+DCRA+NNIT
Sbjct: 81 KKDGSWRMCVDCRAINNIT 99
>XP_015582137.1 PREDICTED: RNA-directed DNA polymerase homolog, partial [Ricinus
communis]
Length = 173
Score = 125 bits (315), Expect = 2e-33
Identities = 57/79 (72%), Positives = 66/79 (83%)
Frame = +3
Query: 309 IRGIKHQINFVLSVTNPNHPAYQSNPEENMELQRQVDKLMGKGFVRESMSPCAVSVILVP 488
IRGI+HQI+F+ + PN PAY+ NPEE E+QRQV +LM KG+VRESMSPCAV VILVP
Sbjct: 18 IRGIEHQIDFIPGASIPNRPAYRCNPEETKEIQRQVSELMDKGYVRESMSPCAVPVILVP 77
Query: 489 KKDGKWRMCIDCRAVNNIT 545
KKDG WRMC+DCRAVN IT
Sbjct: 78 KKDGSWRMCVDCRAVNKIT 96
>XP_015899815.1 PREDICTED: RNA-directed DNA polymerase homolog, partial [Ziziphus
jujuba]
Length = 200
Score = 124 bits (312), Expect = 1e-32
Identities = 55/79 (69%), Positives = 66/79 (83%)
Frame = +3
Query: 309 IRGIKHQINFVLSVTNPNHPAYQSNPEENMELQRQVDKLMGKGFVRESMSPCAVSVILVP 488
IRGI+HQI+FV PN PAY+SNPEE ELQ+QV L+ KG++RES+SPCAV V+LVP
Sbjct: 19 IRGIEHQIDFVPRAAIPNRPAYRSNPEETKELQKQVSDLLDKGYIRESLSPCAVPVLLVP 78
Query: 489 KKDGKWRMCIDCRAVNNIT 545
KKDG WRMC+DCRA+NNIT
Sbjct: 79 KKDGSWRMCVDCRAINNIT 97
>XP_015579650.1 PREDICTED: RNA-directed DNA polymerase homolog, partial [Ricinus
communis]
Length = 209
Score = 123 bits (308), Expect = 6e-32
Identities = 55/79 (69%), Positives = 67/79 (84%)
Frame = +3
Query: 309 IRGIKHQINFVLSVTNPNHPAYQSNPEENMELQRQVDKLMGKGFVRESMSPCAVSVILVP 488
+RGI+HQI+FV + PN PAY+ NPEE ELQRQV++L+ KG+VRES+SPCAV V+LVP
Sbjct: 18 LRGIEHQIDFVPGSSIPNRPAYRVNPEETKELQRQVEELLSKGYVRESLSPCAVPVLLVP 77
Query: 489 KKDGKWRMCIDCRAVNNIT 545
KKDG WRMCIDCRA+N IT
Sbjct: 78 KKDGSWRMCIDCRAINKIT 96
>XP_015877367.1 PREDICTED: RNA-directed DNA polymerase homolog, partial [Ziziphus
jujuba]
Length = 209
Score = 121 bits (304), Expect = 2e-31
Identities = 54/79 (68%), Positives = 65/79 (82%)
Frame = +3
Query: 309 IRGIKHQINFVLSVTNPNHPAYQSNPEENMELQRQVDKLMGKGFVRESMSPCAVSVILVP 488
IRGI+HQI+FV N PAY+SNPEE ELQ+QV L+ KG++RES+SPCAV V+LVP
Sbjct: 25 IRGIEHQIDFVPGAAISNRPAYRSNPEETKELQKQVSDLLDKGYIRESLSPCAVLVLLVP 84
Query: 489 KKDGKWRMCIDCRAVNNIT 545
KKDG WRMC+DCRA+NNIT
Sbjct: 85 KKDGSWRMCVDCRAINNIT 103
>XP_012841286.1 PREDICTED: uncharacterized protein LOC105961600 [Erythranthe
guttata]
Length = 670
Score = 128 bits (322), Expect = 3e-31
Identities = 59/79 (74%), Positives = 68/79 (86%)
Frame = +3
Query: 309 IRGIKHQINFVLSVTNPNHPAYQSNPEENMELQRQVDKLMGKGFVRESMSPCAVSVILVP 488
IRGI+HQI+FV T PN PAY+S+PEE ELQRQVD+L+ KG VRESMSPCAV V+LVP
Sbjct: 541 IRGIEHQIDFVPGATIPNRPAYRSSPEETKELQRQVDELLEKGHVRESMSPCAVPVLLVP 600
Query: 489 KKDGKWRMCIDCRAVNNIT 545
KKDG WRMC+DCRA+NNIT
Sbjct: 601 KKDGTWRMCVDCRAINNIT 619
>JAU30217.1 Transposon Ty3-I Gag-Pol polyprotein, partial [Noccaea
caerulescens]
Length = 145
Score = 119 bits (298), Expect = 3e-31
Identities = 53/79 (67%), Positives = 65/79 (82%)
Frame = +3
Query: 309 IRGIKHQINFVLSVTNPNHPAYQSNPEENMELQRQVDKLMGKGFVRESMSPCAVSVILVP 488
IRGI+HQI+ V PN PAY++NP E ELQ+QV++LM KG +RES+SPCAV V+LVP
Sbjct: 36 IRGIEHQIDLVPGSALPNRPAYRTNPVETKELQKQVEELMSKGHIRESLSPCAVPVLLVP 95
Query: 489 KKDGKWRMCIDCRAVNNIT 545
KKDG WRMC+DCRA+NNIT
Sbjct: 96 KKDGTWRMCVDCRAINNIT 114
>XP_015387373.1 PREDICTED: uncharacterized protein LOC102617792 [Citrus sinensis]
Length = 586
Score = 127 bits (320), Expect = 4e-31
Identities = 57/79 (72%), Positives = 68/79 (86%)
Frame = +3
Query: 309 IRGIKHQINFVLSVTNPNHPAYQSNPEENMELQRQVDKLMGKGFVRESMSPCAVSVILVP 488
IRGI+HQI+FV T PN PAY+SNPEE ELQRQV++L+ KG+V+ESMSPCAV V+LVP
Sbjct: 433 IRGIEHQIDFVPGATIPNRPAYRSNPEETKELQRQVEELLAKGYVKESMSPCAVPVLLVP 492
Query: 489 KKDGKWRMCIDCRAVNNIT 545
KKDG WRMC+DCRA+N IT
Sbjct: 493 KKDGTWRMCVDCRAINKIT 511
>XP_013751668.1 PREDICTED: RNA-directed DNA polymerase homolog [Brassica napus]
Length = 225
Score = 120 bits (302), Expect = 7e-31
Identities = 56/79 (70%), Positives = 63/79 (79%)
Frame = +3
Query: 309 IRGIKHQINFVLSVTNPNHPAYQSNPEENMELQRQVDKLMGKGFVRESMSPCAVSVILVP 488
IRGI+H I+ V PN PAY+ NPEE ELQ QVD+LM KG +RESMSPCAV VILVP
Sbjct: 36 IRGIEHHIDLVPGAYLPNRPAYRINPEETKELQTQVDELMEKGHIRESMSPCAVPVILVP 95
Query: 489 KKDGKWRMCIDCRAVNNIT 545
KKDG WRMC+DCRA+NNIT
Sbjct: 96 KKDGSWRMCVDCRAINNIT 114
>XP_012437514.1 PREDICTED: uncharacterized protein LOC105763728 [Gossypium
raimondii]
Length = 1249
Score = 127 bits (320), Expect = 7e-31
Identities = 57/79 (72%), Positives = 67/79 (84%)
Frame = +3
Query: 309 IRGIKHQINFVLSVTNPNHPAYQSNPEENMELQRQVDKLMGKGFVRESMSPCAVSVILVP 488
IRGI+HQI+F+L T PN P Y+SNPEE ELQ+QV +LM KGFVRES+SPCAV V+LVP
Sbjct: 532 IRGIEHQIDFILGATLPNRPVYRSNPEETKELQKQVKELMEKGFVRESLSPCAVPVLLVP 591
Query: 489 KKDGKWRMCIDCRAVNNIT 545
KKDG WRMC+DCRA+N IT
Sbjct: 592 KKDGTWRMCVDCRAINQIT 610
>XP_016733639.1 PREDICTED: uncharacterized protein LOC107944326 [Gossypium
hirsutum]
Length = 493
Score = 125 bits (314), Expect = 1e-30
Identities = 56/78 (71%), Positives = 66/78 (84%)
Frame = +3
Query: 312 RGIKHQINFVLSVTNPNHPAYQSNPEENMELQRQVDKLMGKGFVRESMSPCAVSVILVPK 491
RGI+HQI+F+ T PN PAY+SNPEE ELQRQV++LM KG++RESMSPCAV V+LVPK
Sbjct: 381 RGIEHQIDFIPGATIPNRPAYRSNPEETKELQRQVEELMSKGYIRESMSPCAVPVLLVPK 440
Query: 492 KDGKWRMCIDCRAVNNIT 545
KD WRMC+DCRAVN IT
Sbjct: 441 KDRSWRMCVDCRAVNKIT 458
>XP_012448725.1 PREDICTED: uncharacterized protein LOC105771893 [Gossypium
raimondii]
Length = 648
Score = 126 bits (317), Expect = 1e-30
Identities = 55/78 (70%), Positives = 66/78 (84%)
Frame = +3
Query: 312 RGIKHQINFVLSVTNPNHPAYQSNPEENMELQRQVDKLMGKGFVRESMSPCAVSVILVPK 491
RGI+HQI+F+ T PN PAY+SNPEE ELQRQ+++ M KG++RESMSPCAV V+LVPK
Sbjct: 300 RGIEHQIDFIPGATIPNRPAYRSNPEETKELQRQIEEFMSKGYIRESMSPCAVPVLLVPK 359
Query: 492 KDGKWRMCIDCRAVNNIT 545
KDG WRMC+DCRAVN IT
Sbjct: 360 KDGSWRMCVDCRAVNKIT 377
>XP_017630112.1 PREDICTED: uncharacterized protein LOC108473056 [Gossypium
arboreum]
Length = 709
Score = 126 bits (317), Expect = 2e-30
Identities = 56/79 (70%), Positives = 68/79 (86%)
Frame = +3
Query: 309 IRGIKHQINFVLSVTNPNHPAYQSNPEENMELQRQVDKLMGKGFVRESMSPCAVSVILVP 488
+RGI+HQI+FV NPN PAY++NPEE ELQRQV++LM KG++RES+SPCAV V+LVP
Sbjct: 572 LRGIEHQIDFVPGAVNPNRPAYRANPEETKELQRQVNELMEKGYIRESLSPCAVPVLLVP 631
Query: 489 KKDGKWRMCIDCRAVNNIT 545
KKDG WRMC+DCRAVN IT
Sbjct: 632 KKDGIWRMCVDCRAVNKIT 650
>JAU38382.1 Transposon Ty3-I Gag-Pol polyprotein, partial [Noccaea
caerulescens]
Length = 322
Score = 122 bits (305), Expect = 2e-30
Identities = 54/79 (68%), Positives = 65/79 (82%)
Frame = +3
Query: 309 IRGIKHQINFVLSVTNPNHPAYQSNPEENMELQRQVDKLMGKGFVRESMSPCAVSVILVP 488
+RGI+HQI+FV T PN PAY++NP E ELQ Q+D+LM KG +RESMSPCAV V+LVP
Sbjct: 230 VRGIEHQIDFVPGSTLPNRPAYRTNPVETKELQLQIDELMDKGHIRESMSPCAVPVLLVP 289
Query: 489 KKDGKWRMCIDCRAVNNIT 545
KDG WRMC+DCRA+NNIT
Sbjct: 290 NKDGSWRMCVDCRAINNIT 308
>XP_012844427.1 PREDICTED: uncharacterized protein K02A2.6-like [Erythranthe
guttata]
Length = 999
Score = 126 bits (316), Expect = 2e-30
Identities = 57/79 (72%), Positives = 68/79 (86%)
Frame = +3
Query: 309 IRGIKHQINFVLSVTNPNHPAYQSNPEENMELQRQVDKLMGKGFVRESMSPCAVSVILVP 488
IRGI+HQI+FV + PN PAY+SNPEE E+QRQV +LM +G VRESMSPCAV V+LVP
Sbjct: 563 IRGIEHQIDFVPGASIPNRPAYRSNPEETKEIQRQVTELMERGHVRESMSPCAVPVLLVP 622
Query: 489 KKDGKWRMCIDCRAVNNIT 545
K+DGKWRMC+DCRA+NNIT
Sbjct: 623 KEDGKWRMCVDCRAINNIT 641
Score = 56.6 bits (135), Expect = 4e-06
Identities = 30/59 (50%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Frame = +2
Query: 89 VHVAIKIEKQLKRRGGQ-RSNPTKGSLWKSNEVKREEKPAVNKSKVEFKQFVTNRGKQG 262
VH+AIKIE QLKRRG R P+ S W+ N V ++EKPA+ K E KQ T+ QG
Sbjct: 269 VHMAIKIENQLKRRGNNPRPAPSSSSSWRHNGVSKDEKPAMIKPNFEPKQNTTSHAAQG 327
Score = 55.8 bits (133), Expect = 7e-06
Identities = 24/29 (82%), Positives = 27/29 (93%)
Frame = +3
Query: 3 WMEFIETFPYVIRYKQRKENVVVDALSQR 89
WMEFIETFPYVI+YKQ KEN+V DALS+R
Sbjct: 961 WMEFIETFPYVIKYKQGKENIVADALSRR 989
>XP_016480216.1 PREDICTED: uncharacterized protein LOC107801400 [Nicotiana tabacum]
Length = 480
Score = 124 bits (311), Expect = 3e-30
Identities = 56/79 (70%), Positives = 67/79 (84%)
Frame = +3
Query: 309 IRGIKHQINFVLSVTNPNHPAYQSNPEENMELQRQVDKLMGKGFVRESMSPCAVSVILVP 488
+RGI+HQI+FV PN PAY+SNPEE ELQRQV++L+ KGFVRESMSPC+V V+LVP
Sbjct: 84 LRGIEHQIDFVPGSQIPNRPAYRSNPEETKELQRQVEELLEKGFVRESMSPCSVPVLLVP 143
Query: 489 KKDGKWRMCIDCRAVNNIT 545
KKDG WRMC+DCRA+N IT
Sbjct: 144 KKDGTWRMCVDCRAINKIT 162
>XP_019057164.1 PREDICTED: uncharacterized protein LOC109116372 [Tarenaya
hassleriana]
Length = 567
Score = 125 bits (313), Expect = 3e-30
Identities = 56/79 (70%), Positives = 68/79 (86%)
Frame = +3
Query: 309 IRGIKHQINFVLSVTNPNHPAYQSNPEENMELQRQVDKLMGKGFVRESMSPCAVSVILVP 488
+RGI+HQI+FV + PN PAY++NP+E ELQRQV +L+ KG+VRESMSPCAV VILVP
Sbjct: 348 LRGIEHQIDFVPGASLPNKPAYRTNPDETKELQRQVTELLEKGYVRESMSPCAVPVILVP 407
Query: 489 KKDGKWRMCIDCRAVNNIT 545
KKDG WRMC+DCRA+NNIT
Sbjct: 408 KKDGTWRMCVDCRAINNIT 426
>OMO50706.1 reverse transcriptase [Corchorus capsularis]
Length = 1289
Score = 125 bits (315), Expect = 3e-30
Identities = 56/79 (70%), Positives = 68/79 (86%)
Frame = +3
Query: 309 IRGIKHQINFVLSVTNPNHPAYQSNPEENMELQRQVDKLMGKGFVRESMSPCAVSVILVP 488
IRGI+HQI+F+ V PN PAY++NPEE EL++QV KL+ KGFVRES+SPCAV V+LVP
Sbjct: 545 IRGIEHQIDFIPGVQIPNKPAYRTNPEETKELEKQVGKLLQKGFVRESLSPCAVPVLLVP 604
Query: 489 KKDGKWRMCIDCRAVNNIT 545
KKDG WRMC+DCRA+NNIT
Sbjct: 605 KKDGTWRMCVDCRAINNIT 623
>XP_010430869.1 PREDICTED: uncharacterized protein LOC104715125 [Camelina sativa]
Length = 264
Score = 120 bits (300), Expect = 4e-30
Identities = 55/79 (69%), Positives = 64/79 (81%)
Frame = +3
Query: 309 IRGIKHQINFVLSVTNPNHPAYQSNPEENMELQRQVDKLMGKGFVRESMSPCAVSVILVP 488
IRGI+HQIN VL PN PAY+ NPEE EL+ QV +LM +G+VRES+SPC V V+LVP
Sbjct: 145 IRGIEHQINLVLGAQLPNRPAYRVNPEEAKELECQVAELMSQGYVRESLSPCVVPVLLVP 204
Query: 489 KKDGKWRMCIDCRAVNNIT 545
KKDG WRMC+DCRAVNNIT
Sbjct: 205 KKDGSWRMCVDCRAVNNIT 223