BLASTX nr result
ID: Panax24_contig00036547
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax24_contig00036547
(417 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_017249440.1 PREDICTED: 50S ribosomal protein L4-like isoform ... 69 3e-11
XP_004252759.1 PREDICTED: uncharacterized protein LOC101261898 [... 68 9e-11
XP_006342636.1 PREDICTED: 50S ribosomal protein L4 [Solanum tube... 67 2e-10
OAY25881.1 hypothetical protein MANES_16G003100 [Manihot esculenta] 65 7e-10
XP_006383858.1 hypothetical protein POPTR_0004s00660g [Populus t... 64 1e-09
XP_015574202.1 PREDICTED: 50S ribosomal protein L4 [Ricinus comm... 64 2e-09
XP_006383860.1 hypothetical protein POPTR_0004s00660g [Populus t... 64 2e-09
XP_017249439.1 PREDICTED: 50S ribosomal protein L4-like isoform ... 64 2e-09
XP_019253538.1 PREDICTED: uncharacterized protein LOC109232285 [... 64 2e-09
XP_016473023.1 PREDICTED: 50S ribosomal protein L4-like [Nicotia... 64 2e-09
XP_009758874.1 PREDICTED: 50S ribosomal protein L4, chloroplasti... 64 2e-09
XP_007026182.2 PREDICTED: 50S ribosomal protein L4 [Theobroma ca... 64 2e-09
EOY28803.1 Ribosomal protein L4/L1 family isoform 1 [Theobroma c... 64 2e-09
XP_016435797.1 PREDICTED: 50S ribosomal protein L4-like [Nicotia... 64 3e-09
GAV87959.1 Ribosomal_L4 domain-containing protein [Cephalotus fo... 64 3e-09
XP_015059410.1 PREDICTED: 50S ribosomal protein L4 [Solanum penn... 63 6e-09
XP_016749502.1 PREDICTED: 50S ribosomal protein L4-like isoform ... 63 6e-09
XP_016749499.1 PREDICTED: 50S ribosomal protein L4-like isoform ... 63 6e-09
XP_017603060.1 PREDICTED: 50S ribosomal protein L4-like isoform ... 62 8e-09
XP_016688181.1 PREDICTED: 50S ribosomal protein L4-like isoform ... 62 8e-09
>XP_017249440.1 PREDICTED: 50S ribosomal protein L4-like isoform X2 [Daucus carota
subsp. sativus]
Length = 300
Score = 68.9 bits (167), Expect = 3e-11
Identities = 39/72 (54%), Positives = 46/72 (63%)
Frame = +2
Query: 185 RALSCCNYQALRSHVSGSTLFSVESSARGKVEPSFFACRKLSTSILTPESTEGAFPSDLL 364
RA+ C N+ A +SHVS +ESS K F A R LSTSILTPES+EG FPSDLL
Sbjct: 18 RAICCRNHGASQSHVS------LESSTEKKTRSPFSAFRNLSTSILTPESSEGTFPSDLL 71
Query: 365 SAKRVLIPEHTI 400
S +V+ PE I
Sbjct: 72 STAQVITPERKI 83
>XP_004252759.1 PREDICTED: uncharacterized protein LOC101261898 [Solanum
lycopersicum]
Length = 305
Score = 67.8 bits (164), Expect = 9e-11
Identities = 38/72 (52%), Positives = 48/72 (66%)
Frame = +2
Query: 185 RALSCCNYQALRSHVSGSTLFSVESSARGKVEPSFFACRKLSTSILTPESTEGAFPSDLL 364
R LS N +A ++ G + VESSA K E F ACR+ STS+LTP+S++G+FPSDLL
Sbjct: 20 RTLSASNVKA---NILGDGVSCVESSAFRKDESLFLACRRYSTSLLTPDSSDGSFPSDLL 76
Query: 365 SAKRVLIPEHTI 400
S KRV PE I
Sbjct: 77 SKKRVSTPEREI 88
>XP_006342636.1 PREDICTED: 50S ribosomal protein L4 [Solanum tuberosum]
Length = 305
Score = 67.0 bits (162), Expect = 2e-10
Identities = 38/72 (52%), Positives = 48/72 (66%)
Frame = +2
Query: 185 RALSCCNYQALRSHVSGSTLFSVESSARGKVEPSFFACRKLSTSILTPESTEGAFPSDLL 364
R LS N +A ++ G + VESS K E F ACR+ STS+LTP+S++G+FPSDLL
Sbjct: 20 RPLSASNVKA---NILGDGVSWVESSVFRKDESLFLACRRYSTSLLTPDSSDGSFPSDLL 76
Query: 365 SAKRVLIPEHTI 400
S KRV IPE I
Sbjct: 77 SKKRVSIPEREI 88
>OAY25881.1 hypothetical protein MANES_16G003100 [Manihot esculenta]
Length = 315
Score = 65.5 bits (158), Expect = 7e-10
Identities = 36/62 (58%), Positives = 43/62 (69%)
Frame = +2
Query: 215 LRSHVSGSTLFSVESSARGKVEPSFFACRKLSTSILTPESTEGAFPSDLLSAKRVLIPEH 394
L V G+ LFS ESS+ K E ++ A R+ STSILTP S++GAFPSDLLS K VL PE
Sbjct: 37 LCGQVVGNCLFSAESSSFVKGEAAYVAYRRFSTSILTPGSSDGAFPSDLLSTKSVLTPER 96
Query: 395 TI 400
I
Sbjct: 97 QI 98
>XP_006383858.1 hypothetical protein POPTR_0004s00660g [Populus trichocarpa]
ERP61655.1 hypothetical protein POPTR_0004s00660g
[Populus trichocarpa]
Length = 277
Score = 64.3 bits (155), Expect = 1e-09
Identities = 36/62 (58%), Positives = 43/62 (69%)
Frame = +2
Query: 215 LRSHVSGSTLFSVESSARGKVEPSFFACRKLSTSILTPESTEGAFPSDLLSAKRVLIPEH 394
L HVSG LFS ESS+ K S A R+LSTS +T EST+G+FPSDLLSAK V+ P+
Sbjct: 39 LYGHVSGDCLFSAESSSFIKGAVSSLAHRRLSTSNVTSESTDGSFPSDLLSAKNVVTPQR 98
Query: 395 TI 400
I
Sbjct: 99 EI 100
>XP_015574202.1 PREDICTED: 50S ribosomal protein L4 [Ricinus communis]
Length = 304
Score = 64.3 bits (155), Expect = 2e-09
Identities = 40/74 (54%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Frame = +2
Query: 185 RALSCCNYQALR-SHVSGST-LFSVESSARGKVEPSFFACRKLSTSILTPESTEGAFPSD 358
R+L +Q+ R SH S + LFS ESS+ K + ACRKLSTSILTP S++ AFPSD
Sbjct: 14 RSLPSLTHQSFRASHESSADCLFSAESSSFIKNGAASLACRKLSTSILTPGSSDDAFPSD 73
Query: 359 LLSAKRVLIPEHTI 400
LLS K +L PE I
Sbjct: 74 LLSTKTLLTPEREI 87
>XP_006383860.1 hypothetical protein POPTR_0004s00660g [Populus trichocarpa]
ERP61657.1 hypothetical protein POPTR_0004s00660g
[Populus trichocarpa]
Length = 317
Score = 64.3 bits (155), Expect = 2e-09
Identities = 36/62 (58%), Positives = 43/62 (69%)
Frame = +2
Query: 215 LRSHVSGSTLFSVESSARGKVEPSFFACRKLSTSILTPESTEGAFPSDLLSAKRVLIPEH 394
L HVSG LFS ESS+ K S A R+LSTS +T EST+G+FPSDLLSAK V+ P+
Sbjct: 39 LYGHVSGDCLFSAESSSFIKGAVSSLAHRRLSTSNVTSESTDGSFPSDLLSAKNVVTPQR 98
Query: 395 TI 400
I
Sbjct: 99 EI 100
>XP_017249439.1 PREDICTED: 50S ribosomal protein L4-like isoform X1 [Daucus carota
subsp. sativus]
Length = 304
Score = 63.9 bits (154), Expect = 2e-09
Identities = 36/72 (50%), Positives = 45/72 (62%)
Frame = +2
Query: 185 RALSCCNYQALRSHVSGSTLFSVESSARGKVEPSFFACRKLSTSILTPESTEGAFPSDLL 364
RA+ C N+ L ++ + S+ESS K F A R LSTSILTPES+EG FPSDLL
Sbjct: 18 RAICCRNHGGLS--LTSQSHVSLESSTEKKTRSPFSAFRNLSTSILTPESSEGTFPSDLL 75
Query: 365 SAKRVLIPEHTI 400
S +V+ PE I
Sbjct: 76 STAQVITPERKI 87
>XP_019253538.1 PREDICTED: uncharacterized protein LOC109232285 [Nicotiana
attenuata] XP_019253539.1 PREDICTED: uncharacterized
protein LOC109232285 [Nicotiana attenuata] OIS98794.1
50s ribosomal protein l4, chloroplastic [Nicotiana
attenuata]
Length = 309
Score = 63.9 bits (154), Expect = 2e-09
Identities = 32/61 (52%), Positives = 42/61 (68%)
Frame = +2
Query: 218 RSHVSGSTLFSVESSARGKVEPSFFACRKLSTSILTPESTEGAFPSDLLSAKRVLIPEHT 397
+ H+ G + VESS K E F +CR+ STSILTP+S++G+FPSDLL+ KRV PE
Sbjct: 32 KGHILGVDVPCVESSVFRKDESFFLSCRRYSTSILTPDSSDGSFPSDLLTKKRVSTPERE 91
Query: 398 I 400
I
Sbjct: 92 I 92
>XP_016473023.1 PREDICTED: 50S ribosomal protein L4-like [Nicotiana tabacum]
XP_016473024.1 PREDICTED: 50S ribosomal protein L4-like
[Nicotiana tabacum]
Length = 309
Score = 63.9 bits (154), Expect = 2e-09
Identities = 32/61 (52%), Positives = 42/61 (68%)
Frame = +2
Query: 218 RSHVSGSTLFSVESSARGKVEPSFFACRKLSTSILTPESTEGAFPSDLLSAKRVLIPEHT 397
+ H+ G + VESS K E F +CR+ STSILTP+S++G+FPSDLL+ KRV PE
Sbjct: 32 KGHILGVDVPCVESSVFRKDESFFLSCRRYSTSILTPDSSDGSFPSDLLTKKRVSTPERE 91
Query: 398 I 400
I
Sbjct: 92 I 92
>XP_009758874.1 PREDICTED: 50S ribosomal protein L4, chloroplastic [Nicotiana
sylvestris] XP_009758875.1 PREDICTED: 50S ribosomal
protein L4, chloroplastic [Nicotiana sylvestris]
Length = 309
Score = 63.9 bits (154), Expect = 2e-09
Identities = 32/61 (52%), Positives = 42/61 (68%)
Frame = +2
Query: 218 RSHVSGSTLFSVESSARGKVEPSFFACRKLSTSILTPESTEGAFPSDLLSAKRVLIPEHT 397
+ H+ G + VESS K E F +CR+ STSILTP+S++G+FPSDLL+ KRV PE
Sbjct: 32 KGHILGVDVPCVESSVFRKDESFFLSCRRYSTSILTPDSSDGSFPSDLLTKKRVSTPERE 91
Query: 398 I 400
I
Sbjct: 92 I 92
>XP_007026182.2 PREDICTED: 50S ribosomal protein L4 [Theobroma cacao]
Length = 315
Score = 63.9 bits (154), Expect = 2e-09
Identities = 34/62 (54%), Positives = 41/62 (66%)
Frame = +2
Query: 215 LRSHVSGSTLFSVESSARGKVEPSFFACRKLSTSILTPESTEGAFPSDLLSAKRVLIPEH 394
L + +SG L E + K SF ACRK +T+ILTP+S E AFPSDLLSAK VL P+
Sbjct: 37 LNACISGDNLPHAECFSFSKGGLSFLACRKFATTILTPDSAESAFPSDLLSAKTVLTPDR 96
Query: 395 TI 400
TI
Sbjct: 97 TI 98
>EOY28803.1 Ribosomal protein L4/L1 family isoform 1 [Theobroma cacao]
EOY28804.1 Ribosomal protein L4/L1 family isoform 1
[Theobroma cacao] EOY28805.1 Ribosomal protein L4/L1
family isoform 1 [Theobroma cacao]
Length = 315
Score = 63.9 bits (154), Expect = 2e-09
Identities = 34/62 (54%), Positives = 41/62 (66%)
Frame = +2
Query: 215 LRSHVSGSTLFSVESSARGKVEPSFFACRKLSTSILTPESTEGAFPSDLLSAKRVLIPEH 394
L + +SG L E + K SF ACRK +T+ILTP+S E AFPSDLLSAK VL P+
Sbjct: 37 LNACISGDNLPHAECFSFSKGGLSFLACRKFATTILTPDSAESAFPSDLLSAKTVLTPDR 96
Query: 395 TI 400
TI
Sbjct: 97 TI 98
>XP_016435797.1 PREDICTED: 50S ribosomal protein L4-like [Nicotiana tabacum]
XP_016435801.1 PREDICTED: 50S ribosomal protein L4-like
[Nicotiana tabacum] XP_016435811.1 PREDICTED: 50S
ribosomal protein L4-like [Nicotiana tabacum]
Length = 309
Score = 63.5 bits (153), Expect = 3e-09
Identities = 31/61 (50%), Positives = 42/61 (68%)
Frame = +2
Query: 218 RSHVSGSTLFSVESSARGKVEPSFFACRKLSTSILTPESTEGAFPSDLLSAKRVLIPEHT 397
+ H+ G + VESS K E F +CR+ ST+ILTP+S++G+FPSDLL+ KRV PE
Sbjct: 32 KCHILGIDMPCVESSVSRKDESFFLSCRRYSTTILTPDSSDGSFPSDLLTKKRVSTPERE 91
Query: 398 I 400
I
Sbjct: 92 I 92
>GAV87959.1 Ribosomal_L4 domain-containing protein [Cephalotus follicularis]
Length = 314
Score = 63.5 bits (153), Expect = 3e-09
Identities = 35/65 (53%), Positives = 40/65 (61%)
Frame = +2
Query: 206 YQALRSHVSGSTLFSVESSARGKVEPSFFACRKLSTSILTPESTEGAFPSDLLSAKRVLI 385
Y H+SG F ES + K SF R+LSTSILTPES EG FP+DLLS K +L
Sbjct: 33 YHGFGGHLSGDCSFFPESWSFSKGGSSFLGYRRLSTSILTPESEEGDFPADLLSKKVLLA 92
Query: 386 PEHTI 400
PE TI
Sbjct: 93 PERTI 97
>XP_015059410.1 PREDICTED: 50S ribosomal protein L4 [Solanum pennellii]
Length = 305
Score = 62.8 bits (151), Expect = 6e-09
Identities = 36/72 (50%), Positives = 45/72 (62%)
Frame = +2
Query: 185 RALSCCNYQALRSHVSGSTLFSVESSARGKVEPSFFACRKLSTSILTPESTEGAFPSDLL 364
R LS N +A ++ G + ESSA K E F CR STS+LTP+S++G+FPSDLL
Sbjct: 20 RTLSASNVKA---NILGDGVSCAESSAFRKDESLFLTCRIYSTSLLTPDSSDGSFPSDLL 76
Query: 365 SAKRVLIPEHTI 400
S KRV PE I
Sbjct: 77 SKKRVSTPEREI 88
>XP_016749502.1 PREDICTED: 50S ribosomal protein L4-like isoform X2 [Gossypium
hirsutum]
Length = 308
Score = 62.8 bits (151), Expect = 6e-09
Identities = 32/62 (51%), Positives = 39/62 (62%)
Frame = +2
Query: 215 LRSHVSGSTLFSVESSARGKVEPSFFACRKLSTSILTPESTEGAFPSDLLSAKRVLIPEH 394
L ++G L E + K PSF R+ ST+ILTP+S GAFPSDLLS+K VL PE
Sbjct: 30 LSGRIAGDNLLHAECFSLSKGGPSFLGFRRFSTTILTPDSNGGAFPSDLLSSKTVLTPER 89
Query: 395 TI 400
TI
Sbjct: 90 TI 91
>XP_016749499.1 PREDICTED: 50S ribosomal protein L4-like isoform X1 [Gossypium
hirsutum] XP_016749500.1 PREDICTED: 50S ribosomal
protein L4-like isoform X1 [Gossypium hirsutum]
XP_016749501.1 PREDICTED: 50S ribosomal protein L4-like
isoform X1 [Gossypium hirsutum]
Length = 315
Score = 62.8 bits (151), Expect = 6e-09
Identities = 32/62 (51%), Positives = 39/62 (62%)
Frame = +2
Query: 215 LRSHVSGSTLFSVESSARGKVEPSFFACRKLSTSILTPESTEGAFPSDLLSAKRVLIPEH 394
L ++G L E + K PSF R+ ST+ILTP+S GAFPSDLLS+K VL PE
Sbjct: 37 LSGRIAGDNLLHAECFSLSKGGPSFLGFRRFSTTILTPDSNGGAFPSDLLSSKTVLTPER 96
Query: 395 TI 400
TI
Sbjct: 97 TI 98
>XP_017603060.1 PREDICTED: 50S ribosomal protein L4-like isoform X2 [Gossypium
arboreum]
Length = 308
Score = 62.4 bits (150), Expect = 8e-09
Identities = 32/62 (51%), Positives = 39/62 (62%)
Frame = +2
Query: 215 LRSHVSGSTLFSVESSARGKVEPSFFACRKLSTSILTPESTEGAFPSDLLSAKRVLIPEH 394
L ++G L E + K PSF R+ ST+ILTP+S GAFPSDLLS+K VL PE
Sbjct: 30 LSGRIAGDNLLHAECFSFSKGGPSFLGFRRFSTTILTPDSNGGAFPSDLLSSKTVLTPER 89
Query: 395 TI 400
TI
Sbjct: 90 TI 91
>XP_016688181.1 PREDICTED: 50S ribosomal protein L4-like isoform X2 [Gossypium
hirsutum]
Length = 308
Score = 62.4 bits (150), Expect = 8e-09
Identities = 32/62 (51%), Positives = 39/62 (62%)
Frame = +2
Query: 215 LRSHVSGSTLFSVESSARGKVEPSFFACRKLSTSILTPESTEGAFPSDLLSAKRVLIPEH 394
L ++G L E + K PSF R+ ST+ILTP+S GAFPSDLLS+K VL PE
Sbjct: 30 LSDQIAGDNLLHAECFSFSKGGPSFLGFRRFSTTILTPDSNGGAFPSDLLSSKTVLTPER 89
Query: 395 TI 400
TI
Sbjct: 90 TI 91