BLASTX nr result
ID: Panax24_contig00036291
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax24_contig00036291
(569 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_017219040.1 PREDICTED: RNA-dependent RNA polymerase 2-like [D... 227 1e-65
KZM86816.1 hypothetical protein DCAR_023950 [Daucus carota subsp... 227 1e-65
XP_017227942.1 PREDICTED: RNA-dependent RNA polymerase 2-like [D... 214 4e-61
KZM81081.1 hypothetical protein DCAR_031305 [Daucus carota subsp... 214 5e-61
XP_016496493.1 PREDICTED: RNA-dependent RNA polymerase 2-like, p... 184 2e-51
AAU21243.1 putative RNA-dependent RNA polymerase RdRP2 [Nicotian... 187 2e-51
XP_006345040.1 PREDICTED: RNA-dependent RNA polymerase 2 [Solanu... 185 9e-51
XP_009623301.1 PREDICTED: RNA-dependent RNA polymerase 2 [Nicoti... 184 1e-50
CDP19325.1 unnamed protein product [Coffea canephora] 182 6e-50
KVI06345.1 Nucleotide-binding, alpha-beta plait [Cynara carduncu... 181 3e-49
XP_016448058.1 PREDICTED: RNA-dependent RNA polymerase 2 [Nicoti... 180 5e-49
XP_009796585.1 PREDICTED: RNA-dependent RNA polymerase 2 [Nicoti... 180 5e-49
XP_016563470.1 PREDICTED: RNA-dependent RNA polymerase 2 [Capsic... 180 5e-49
XP_019243714.1 PREDICTED: RNA-dependent RNA polymerase 2 [Nicoti... 179 1e-48
XP_015070676.1 PREDICTED: RNA-dependent RNA polymerase 2 [Solanu... 178 2e-48
XP_011071821.1 PREDICTED: RNA-dependent RNA polymerase 2 [Sesamu... 176 2e-47
XP_004236120.1 PREDICTED: RNA-dependent RNA polymerase 2 [Solanu... 174 5e-47
XP_002280099.1 PREDICTED: RNA-dependent RNA polymerase 2 [Vitis ... 171 5e-46
KZV56554.1 RNA-dependent RNA polymerase 2-like [Dorcoceras hygro... 166 5e-44
AHL27587.1 RNA-dependent RNA polymerase 4 [Salvia miltiorrhiza] 163 4e-43
>XP_017219040.1 PREDICTED: RNA-dependent RNA polymerase 2-like [Daucus carota
subsp. sativus]
Length = 1117
Score = 227 bits (578), Expect = 1e-65
Identities = 115/187 (61%), Positives = 133/187 (71%)
Frame = -2
Query: 562 MGVEERPTLTVKVSNIPRTAIAKELFDFFESIIGKGSVFACEIFSDHKNWKARDSGRVQF 383
MGVEERPTL++K SNIPRT A+E+ DFFES IGK SVFACEIFS+HKNWK RDSGRVQF
Sbjct: 1 MGVEERPTLSLKFSNIPRTTTAQEILDFFESRIGKASVFACEIFSEHKNWKPRDSGRVQF 60
Query: 382 ETLDFKSTAITLFQQGKHVFKSFNXXXXXXXXXXXFRPADSQNRVEKGVLNAGLLAADLD 203
ETL+ K A+TL+QQG+ VFK N RPA+ NRVE GVL+AG+L+
Sbjct: 61 ETLEHKIRALTLYQQGQLVFKKHNICLSSSFDDVIIRPAEVSNRVENGVLSAGILSG--- 117
Query: 202 KKGSLSENDSLCMCVLEAWEGVRTWIMPERQCFEFWVNHNGVSYKLEVQFGDVLETSRCC 23
S M VLE W VR W+MPER EFW++ +GVSYKLEV FGDVLE S+CC
Sbjct: 118 ---------SEWMSVLERWGSVRAWVMPERMACEFWLDCDGVSYKLEVLFGDVLEVSKCC 168
Query: 22 LNGGTEP 2
LNGGTEP
Sbjct: 169 LNGGTEP 175
>KZM86816.1 hypothetical protein DCAR_023950 [Daucus carota subsp. sativus]
Length = 1137
Score = 227 bits (578), Expect = 1e-65
Identities = 115/187 (61%), Positives = 133/187 (71%)
Frame = -2
Query: 562 MGVEERPTLTVKVSNIPRTAIAKELFDFFESIIGKGSVFACEIFSDHKNWKARDSGRVQF 383
MGVEERPTL++K SNIPRT A+E+ DFFES IGK SVFACEIFS+HKNWK RDSGRVQF
Sbjct: 1 MGVEERPTLSLKFSNIPRTTTAQEILDFFESRIGKASVFACEIFSEHKNWKPRDSGRVQF 60
Query: 382 ETLDFKSTAITLFQQGKHVFKSFNXXXXXXXXXXXFRPADSQNRVEKGVLNAGLLAADLD 203
ETL+ K A+TL+QQG+ VFK N RPA+ NRVE GVL+AG+L+
Sbjct: 61 ETLEHKIRALTLYQQGQLVFKKHNICLSSSFDDVIIRPAEVSNRVENGVLSAGILSG--- 117
Query: 202 KKGSLSENDSLCMCVLEAWEGVRTWIMPERQCFEFWVNHNGVSYKLEVQFGDVLETSRCC 23
S M VLE W VR W+MPER EFW++ +GVSYKLEV FGDVLE S+CC
Sbjct: 118 ---------SEWMSVLERWGSVRAWVMPERMACEFWLDCDGVSYKLEVLFGDVLEVSKCC 168
Query: 22 LNGGTEP 2
LNGGTEP
Sbjct: 169 LNGGTEP 175
>XP_017227942.1 PREDICTED: RNA-dependent RNA polymerase 2-like [Daucus carota
subsp. sativus]
Length = 1118
Score = 214 bits (545), Expect = 4e-61
Identities = 108/187 (57%), Positives = 127/187 (67%)
Frame = -2
Query: 562 MGVEERPTLTVKVSNIPRTAIAKELFDFFESIIGKGSVFACEIFSDHKNWKARDSGRVQF 383
MG EERPTL+VK SN+P+T+ A+E+ DFFES IGK SVFACEIFSDHKNWKARDSGRVQF
Sbjct: 1 MGAEERPTLSVKFSNVPKTSTAQEIADFFESRIGKASVFACEIFSDHKNWKARDSGRVQF 60
Query: 382 ETLDFKSTAITLFQQGKHVFKSFNXXXXXXXXXXXFRPADSQNRVEKGVLNAGLLAADLD 203
ET + K TA+ L+QQG+ VFK N RP + NRVE GVL+ G+++
Sbjct: 61 ETPEHKITALALYQQGQLVFKKHNICLSGSFDDVVVRPVEVSNRVEDGVLSCGIMSG--- 117
Query: 202 KKGSLSENDSLCMCVLEAWEGVRTWIMPERQCFEFWVNHNGVSYKLEVQFGDVLETSRCC 23
S M VLE W VR W+MPER EFW++ GV YKLEV FGDVLE S+CC
Sbjct: 118 ---------SERMWVLEKWGSVRAWVMPERMSCEFWLDCGGVGYKLEVLFGDVLEVSKCC 168
Query: 22 LNGGTEP 2
LNG EP
Sbjct: 169 LNGAAEP 175
>KZM81081.1 hypothetical protein DCAR_031305 [Daucus carota subsp. sativus]
Length = 1325
Score = 214 bits (545), Expect = 5e-61
Identities = 108/187 (57%), Positives = 127/187 (67%)
Frame = -2
Query: 562 MGVEERPTLTVKVSNIPRTAIAKELFDFFESIIGKGSVFACEIFSDHKNWKARDSGRVQF 383
MG EERPTL+VK SN+P+T+ A+E+ DFFES IGK SVFACEIFSDHKNWKARDSGRVQF
Sbjct: 1 MGAEERPTLSVKFSNVPKTSTAQEIADFFESRIGKASVFACEIFSDHKNWKARDSGRVQF 60
Query: 382 ETLDFKSTAITLFQQGKHVFKSFNXXXXXXXXXXXFRPADSQNRVEKGVLNAGLLAADLD 203
ET + K TA+ L+QQG+ VFK N RP + NRVE GVL+ G+++
Sbjct: 61 ETPEHKITALALYQQGQLVFKKHNICLSGSFDDVVVRPVEVSNRVEDGVLSCGIMSG--- 117
Query: 202 KKGSLSENDSLCMCVLEAWEGVRTWIMPERQCFEFWVNHNGVSYKLEVQFGDVLETSRCC 23
S M VLE W VR W+MPER EFW++ GV YKLEV FGDVLE S+CC
Sbjct: 118 ---------SERMWVLEKWGSVRAWVMPERMSCEFWLDCGGVGYKLEVLFGDVLEVSKCC 168
Query: 22 LNGGTEP 2
LNG EP
Sbjct: 169 LNGAAEP 175
>XP_016496493.1 PREDICTED: RNA-dependent RNA polymerase 2-like, partial [Nicotiana
tabacum]
Length = 683
Score = 184 bits (468), Expect = 2e-51
Identities = 99/182 (54%), Positives = 122/182 (67%), Gaps = 1/182 (0%)
Frame = -2
Query: 562 MGVEERPTLTVKVSNIPRTAIAKELFDFFESIIGKGSVFACEIFSDHKNWKARDSGRVQF 383
MGVE+R T TV+VSNIP+TAIAK+LFDFFES IGKGSVFAC+IFS+HKNWK+R GRVQF
Sbjct: 1 MGVEKRITATVRVSNIPQTAIAKQLFDFFESSIGKGSVFACDIFSEHKNWKSRGHGRVQF 60
Query: 382 ETLDFKSTAITLFQQGKHVFKSFNXXXXXXXXXXXFRPADSQNRVEKGVLNAGLLAADLD 203
ET K +++L +QGK VFK RP + R +KG+L+ G+L
Sbjct: 61 ETAQSKLQSLSLSEQGKLVFKGHQLILTSSFDDIIARPIEPNYRFQKGILHTGVLL---- 116
Query: 202 KKGSLSENDSLCMCVLEAWEGVRTWIMPERQCFEFWVNH-NGVSYKLEVQFGDVLETSRC 26
+ND M VLE WE V+T IMPER+ EFWV+H G Y+LEVQFGD++ET C
Sbjct: 117 ------KND--YMEVLETWENVKTLIMPERKSLEFWVSHAKGECYRLEVQFGDIIETCGC 168
Query: 25 CL 20
L
Sbjct: 169 SL 170
>AAU21243.1 putative RNA-dependent RNA polymerase RdRP2 [Nicotiana benthamiana]
Length = 1120
Score = 187 bits (474), Expect = 2e-51
Identities = 100/182 (54%), Positives = 122/182 (67%), Gaps = 1/182 (0%)
Frame = -2
Query: 562 MGVEERPTLTVKVSNIPRTAIAKELFDFFESIIGKGSVFACEIFSDHKNWKARDSGRVQF 383
MGVE+R T TV+VSNIP+TAIAK+LFDFFES IGKGSVFAC+IFS+HKNWK+R GRVQF
Sbjct: 1 MGVEKRVTATVRVSNIPQTAIAKQLFDFFESSIGKGSVFACDIFSEHKNWKSRGHGRVQF 60
Query: 382 ETLDFKSTAITLFQQGKHVFKSFNXXXXXXXXXXXFRPADSQNRVEKGVLNAGLLAADLD 203
ET K +++L +QGK VFK RP + R +KG+L+ G+L
Sbjct: 61 ETSQSKLQSLSLSEQGKLVFKGHQLILTSSFDDIIARPIELNYRFQKGILHTGILL---- 116
Query: 202 KKGSLSENDSLCMCVLEAWEGVRTWIMPERQCFEFWVNH-NGVSYKLEVQFGDVLETSRC 26
END M VLE WE V+T IMPER+ EFWV+H G Y+LEVQFGD++ET C
Sbjct: 117 ------END--YMEVLETWENVKTLIMPERKSLEFWVSHAKGECYRLEVQFGDIIETCEC 168
Query: 25 CL 20
L
Sbjct: 169 SL 170
>XP_006345040.1 PREDICTED: RNA-dependent RNA polymerase 2 [Solanum tuberosum]
Length = 1119
Score = 185 bits (469), Expect = 9e-51
Identities = 96/181 (53%), Positives = 122/181 (67%)
Frame = -2
Query: 562 MGVEERPTLTVKVSNIPRTAIAKELFDFFESIIGKGSVFACEIFSDHKNWKARDSGRVQF 383
MGVE+R T TV+VSNIP++AIAK+LFDFF+S+IGKGSVFAC+IFS+HKNWK+R GRVQF
Sbjct: 1 MGVEKRATATVRVSNIPQSAIAKDLFDFFDSLIGKGSVFACDIFSEHKNWKSRGHGRVQF 60
Query: 382 ETLDFKSTAITLFQQGKHVFKSFNXXXXXXXXXXXFRPADSQNRVEKGVLNAGLLAADLD 203
ETL K ++L +QG +FK RP + + R + G+L+ GLL
Sbjct: 61 ETLQDKLHCLSLSEQGNLLFKGHQLSLVSSFDDIIARPVEPKCRFQDGILHTGLLV---- 116
Query: 202 KKGSLSENDSLCMCVLEAWEGVRTWIMPERQCFEFWVNHNGVSYKLEVQFGDVLETSRCC 23
+ND M VLE WE V+T IMPER+C EFWV+H Y+LEVQFGDV+E + C
Sbjct: 117 ------KND--VMQVLETWEDVKTLIMPERKCLEFWVSHAEECYRLEVQFGDVVEATVCS 168
Query: 22 L 20
L
Sbjct: 169 L 169
>XP_009623301.1 PREDICTED: RNA-dependent RNA polymerase 2 [Nicotiana
tomentosiformis]
Length = 1120
Score = 184 bits (468), Expect = 1e-50
Identities = 99/182 (54%), Positives = 122/182 (67%), Gaps = 1/182 (0%)
Frame = -2
Query: 562 MGVEERPTLTVKVSNIPRTAIAKELFDFFESIIGKGSVFACEIFSDHKNWKARDSGRVQF 383
MGVE+R T TV+VSNIP+TAIAK+LFDFFES IGKGSVFAC+IFS+HKNWK+R GRVQF
Sbjct: 1 MGVEKRITATVRVSNIPQTAIAKQLFDFFESSIGKGSVFACDIFSEHKNWKSRGHGRVQF 60
Query: 382 ETLDFKSTAITLFQQGKHVFKSFNXXXXXXXXXXXFRPADSQNRVEKGVLNAGLLAADLD 203
ET K +++L +QGK VFK RP + R +KG+L+ G+L
Sbjct: 61 ETAQSKLQSLSLSEQGKLVFKGHQLILTSSFDDIIARPIEPNYRFQKGILHTGVLL---- 116
Query: 202 KKGSLSENDSLCMCVLEAWEGVRTWIMPERQCFEFWVNH-NGVSYKLEVQFGDVLETSRC 26
+ND M VLE WE V+T IMPER+ EFWV+H G Y+LEVQFGD++ET C
Sbjct: 117 ------KND--YMEVLETWENVKTLIMPERKSLEFWVSHAKGECYRLEVQFGDIIETCGC 168
Query: 25 CL 20
L
Sbjct: 169 SL 170
>CDP19325.1 unnamed protein product [Coffea canephora]
Length = 1120
Score = 182 bits (463), Expect = 6e-50
Identities = 94/182 (51%), Positives = 120/182 (65%)
Frame = -2
Query: 562 MGVEERPTLTVKVSNIPRTAIAKELFDFFESIIGKGSVFACEIFSDHKNWKARDSGRVQF 383
M VEER T TV+V NIP++A AK+L FF+S IG+ +VFA EIFS+HKNWK+R G+VQF
Sbjct: 1 MAVEERTTATVRVQNIPQSANAKDLLAFFQSTIGEDTVFAIEIFSEHKNWKSRGHGKVQF 60
Query: 382 ETLDFKSTAITLFQQGKHVFKSFNXXXXXXXXXXXFRPADSQNRVEKGVLNAGLLAADLD 203
ETL+ K ++L ++GK FK + FRP DS+ R++ GVL G+L
Sbjct: 61 ETLEAKIKCLSLSEKGKLFFKGSHLRLSHSIDEVIFRPVDSKLRIKNGVLRTGILL---- 116
Query: 202 KKGSLSENDSLCMCVLEAWEGVRTWIMPERQCFEFWVNHNGVSYKLEVQFGDVLETSRCC 23
ND CM VLE W+GV+ WIMPER EFW++H G YKLEVQFGDVLE+ CC
Sbjct: 117 ------RND--CMSVLERWDGVKVWIMPERNILEFWLSHGGECYKLEVQFGDVLESCGCC 168
Query: 22 LN 17
L+
Sbjct: 169 LD 170
>KVI06345.1 Nucleotide-binding, alpha-beta plait [Cynara cardunculus var.
scolymus]
Length = 1063
Score = 181 bits (458), Expect = 3e-49
Identities = 96/182 (52%), Positives = 115/182 (63%)
Frame = -2
Query: 562 MGVEERPTLTVKVSNIPRTAIAKELFDFFESIIGKGSVFACEIFSDHKNWKARDSGRVQF 383
M VEER T TV+VSNIPR+ A++L DF ES GK +VFACEI SDHKNWK+R GR+QF
Sbjct: 1 MAVEERATATVRVSNIPRSVTAQDLLDFLESHTGKSTVFACEISSDHKNWKSRGFGRIQF 60
Query: 382 ETLDFKSTAITLFQQGKHVFKSFNXXXXXXXXXXXFRPADSQNRVEKGVLNAGLLAADLD 203
ETL+ KS AI+L +QG FK FN FRP NRVE G L GLL
Sbjct: 61 ETLESKSKAISLSRQGLLCFKGFNLSLSHSLDDVIFRPVQPHNRVEHGFLRTGLLL---- 116
Query: 202 KKGSLSENDSLCMCVLEAWEGVRTWIMPERQCFEFWVNHNGVSYKLEVQFGDVLETSRCC 23
+ D CM VLE+WE V+ W++PER+ EFWV H G Y+LE+QF DVLE C
Sbjct: 117 ------KRD--CMSVLESWEDVKAWVLPERKSLEFWVKHFGDCYRLELQFSDVLEAFPCS 168
Query: 22 LN 17
L+
Sbjct: 169 LH 170
>XP_016448058.1 PREDICTED: RNA-dependent RNA polymerase 2 [Nicotiana tabacum]
Length = 1120
Score = 180 bits (456), Expect = 5e-49
Identities = 97/182 (53%), Positives = 121/182 (66%), Gaps = 1/182 (0%)
Frame = -2
Query: 562 MGVEERPTLTVKVSNIPRTAIAKELFDFFESIIGKGSVFACEIFSDHKNWKARDSGRVQF 383
MGVE+R T TV+VSNIP+TAIAK+LFDFFES I KGSVFAC+IFS+HKNWK+R GRVQF
Sbjct: 1 MGVEKRVTATVRVSNIPQTAIAKQLFDFFESSIRKGSVFACDIFSEHKNWKSRGHGRVQF 60
Query: 382 ETLDFKSTAITLFQQGKHVFKSFNXXXXXXXXXXXFRPADSQNRVEKGVLNAGLLAADLD 203
ET K A++L +QGK +FK RP + R +KG+L+ G+L
Sbjct: 61 ETSQSKLQALSLSEQGKLIFKGHQLILTSSFDDIIVRPIEPNYRFQKGILHTGVLL---- 116
Query: 202 KKGSLSENDSLCMCVLEAWEGVRTWIMPERQCFEFWVNH-NGVSYKLEVQFGDVLETSRC 26
+ND M VLE WE V+T IMPER+ EFWV++ G Y+LEVQFGD++ET C
Sbjct: 117 ------KND--YMEVLETWENVKTLIMPERKSLEFWVSYAKGECYRLEVQFGDIIETCGC 168
Query: 25 CL 20
L
Sbjct: 169 SL 170
>XP_009796585.1 PREDICTED: RNA-dependent RNA polymerase 2 [Nicotiana sylvestris]
Length = 1120
Score = 180 bits (456), Expect = 5e-49
Identities = 97/182 (53%), Positives = 121/182 (66%), Gaps = 1/182 (0%)
Frame = -2
Query: 562 MGVEERPTLTVKVSNIPRTAIAKELFDFFESIIGKGSVFACEIFSDHKNWKARDSGRVQF 383
MGVE+R T TV+VSNIP+TAIAK+LFDFFES I KGSVFAC+IFS+HKNWK+R GRVQF
Sbjct: 1 MGVEKRVTATVRVSNIPQTAIAKQLFDFFESSIRKGSVFACDIFSEHKNWKSRGHGRVQF 60
Query: 382 ETLDFKSTAITLFQQGKHVFKSFNXXXXXXXXXXXFRPADSQNRVEKGVLNAGLLAADLD 203
ET K A++L +QGK +FK RP + R +KG+L+ G+L
Sbjct: 61 ETSQSKLQALSLSEQGKLIFKGHQLILTSSFDDIIVRPIEPNYRFQKGILHTGVLL---- 116
Query: 202 KKGSLSENDSLCMCVLEAWEGVRTWIMPERQCFEFWVNH-NGVSYKLEVQFGDVLETSRC 26
+ND M VLE WE V+T IMPER+ EFWV++ G Y+LEVQFGD++ET C
Sbjct: 117 ------KND--YMEVLETWENVKTLIMPERKSLEFWVSYAKGECYRLEVQFGDIIETCGC 168
Query: 25 CL 20
L
Sbjct: 169 SL 170
>XP_016563470.1 PREDICTED: RNA-dependent RNA polymerase 2 [Capsicum annuum]
Length = 1130
Score = 180 bits (456), Expect = 5e-49
Identities = 94/179 (52%), Positives = 117/179 (65%)
Frame = -2
Query: 556 VEERPTLTVKVSNIPRTAIAKELFDFFESIIGKGSVFACEIFSDHKNWKARDSGRVQFET 377
VE+R T TV+VSNIP++A AK+LF+FF+S IGKGSVFAC+IFS+HKNWK+R +GRVQFET
Sbjct: 4 VEKRVTATVRVSNIPKSATAKDLFNFFDSKIGKGSVFACDIFSEHKNWKSRGNGRVQFET 63
Query: 376 LDFKSTAITLFQQGKHVFKSFNXXXXXXXXXXXFRPADSQNRVEKGVLNAGLLAADLDKK 197
L KS +++L +QG FK + RP D + R E G LN G+L
Sbjct: 64 LQQKSQSLSLAEQGNLNFKGYQLNLVSSFDDIIARPVDPECRFEGGALNVGVLV------ 117
Query: 196 GSLSENDSLCMCVLEAWEGVRTWIMPERQCFEFWVNHNGVSYKLEVQFGDVLETSRCCL 20
DS M VLE WEGV+ +MPER+ EFWV + G Y+LEVQFGDV ET C L
Sbjct: 118 ------DSEVMEVLEKWEGVKMLVMPERKSVEFWVGYEGECYRLEVQFGDVAETCICAL 170
>XP_019243714.1 PREDICTED: RNA-dependent RNA polymerase 2 [Nicotiana attenuata]
OIT04938.1 rna-dependent rna polymerase 2 [Nicotiana
attenuata]
Length = 1120
Score = 179 bits (454), Expect = 1e-48
Identities = 96/182 (52%), Positives = 120/182 (65%), Gaps = 1/182 (0%)
Frame = -2
Query: 562 MGVEERPTLTVKVSNIPRTAIAKELFDFFESIIGKGSVFACEIFSDHKNWKARDSGRVQF 383
MGVE+R T T +VSNIP+TAIAK+LFDFFES IGKGSVFAC+IFS+HKNWK+R GRVQF
Sbjct: 1 MGVEKRVTATARVSNIPQTAIAKQLFDFFESSIGKGSVFACDIFSEHKNWKSRGHGRVQF 60
Query: 382 ETLDFKSTAITLFQQGKHVFKSFNXXXXXXXXXXXFRPADSQNRVEKGVLNAGLLAADLD 203
ET K +++L +QGK +FK RP + R +KG+L+ G+L
Sbjct: 61 ETSQSKLQSLSLSEQGKLIFKGNQLILTSSFDDIIARPIEPNYRFQKGILHTGILL---- 116
Query: 202 KKGSLSENDSLCMCVLEAWEGVRTWIMPERQCFEFWVNH-NGVSYKLEVQFGDVLETSRC 26
+ND M VLE WE V+T IMPER+ EFWV+H Y+LEVQFGD++ET C
Sbjct: 117 ------KND--YMEVLETWENVKTLIMPERKSLEFWVSHAKEECYRLEVQFGDIIETCGC 168
Query: 25 CL 20
L
Sbjct: 169 SL 170
>XP_015070676.1 PREDICTED: RNA-dependent RNA polymerase 2 [Solanum pennellii]
Length = 1123
Score = 178 bits (452), Expect = 2e-48
Identities = 94/181 (51%), Positives = 119/181 (65%)
Frame = -2
Query: 562 MGVEERPTLTVKVSNIPRTAIAKELFDFFESIIGKGSVFACEIFSDHKNWKARDSGRVQF 383
MGVE+R T TV+VSNIP++AIAK+LF+FF+S+IGKGSVFAC+I S+HKNWK+R GRVQF
Sbjct: 1 MGVEKRATATVRVSNIPQSAIAKDLFNFFDSLIGKGSVFACDIHSEHKNWKSRGHGRVQF 60
Query: 382 ETLDFKSTAITLFQQGKHVFKSFNXXXXXXXXXXXFRPADSQNRVEKGVLNAGLLAADLD 203
ETL K ++L +QG +FK RP + + R + G+L+ GLL
Sbjct: 61 ETLQDKLHCLSLAEQGNLLFKGHQLSLVSSFDDIITRPVEPKCRFQAGILHTGLLV---- 116
Query: 202 KKGSLSENDSLCMCVLEAWEGVRTWIMPERQCFEFWVNHNGVSYKLEVQFGDVLETSRCC 23
E D M VLE WE V+T IMPER+C EFWV+H Y+LEVQFGDV E + C
Sbjct: 117 ------EKD--VMQVLETWEDVKTLIMPERKCLEFWVSHAEECYRLEVQFGDVTEGTLCS 168
Query: 22 L 20
L
Sbjct: 169 L 169
>XP_011071821.1 PREDICTED: RNA-dependent RNA polymerase 2 [Sesamum indicum]
Length = 1133
Score = 176 bits (445), Expect = 2e-47
Identities = 96/182 (52%), Positives = 120/182 (65%), Gaps = 4/182 (2%)
Frame = -2
Query: 547 RPTLTVKVSNIPRTAIAKELFDFFESIIGKGSVFACEIFSDHKNWKARDSGRVQFETLDF 368
RPTLTVKVSNIP+TAIA+EL F ES +GKG+VFA EIF++HKNWK+R GRVQF++ +
Sbjct: 10 RPTLTVKVSNIPQTAIAQELLSFLESTLGKGTVFAIEIFTEHKNWKSRGHGRVQFDSPEA 69
Query: 367 KSTAITLFQQGKHVFKSFNXXXXXXXXXXXFRPADSQNRVEKG---VLNAGLLA-ADLDK 200
K A++L +Q K +FK F RP + +NRV G VL AG++ AD
Sbjct: 70 KIKALSLSEQRKLLFKGFYISISPSFEDVIIRPVEPRNRVGYGGGMVLLAGVMVRAD--- 126
Query: 199 KGSLSENDSLCMCVLEAWEGVRTWIMPERQCFEFWVNHNGVSYKLEVQFGDVLETSRCCL 20
CM +LE+W+GVR W MPER+ EF+VNH G YKLEVQFGDVLET C L
Sbjct: 127 ----------CMGILESWDGVRLWFMPERKKLEFFVNHEGECYKLEVQFGDVLETRGCYL 176
Query: 19 NG 14
+G
Sbjct: 177 DG 178
>XP_004236120.1 PREDICTED: RNA-dependent RNA polymerase 2 [Solanum lycopersicum]
Length = 1119
Score = 174 bits (441), Expect = 5e-47
Identities = 92/179 (51%), Positives = 117/179 (65%)
Frame = -2
Query: 562 MGVEERPTLTVKVSNIPRTAIAKELFDFFESIIGKGSVFACEIFSDHKNWKARDSGRVQF 383
MGVE+R T TV+VSNIP++AIAK+L +FF+S+IGKGSVFAC+I S+HKNWK+R GRVQF
Sbjct: 1 MGVEKRATATVRVSNIPQSAIAKDLSNFFDSLIGKGSVFACDIHSEHKNWKSRGHGRVQF 60
Query: 382 ETLDFKSTAITLFQQGKHVFKSFNXXXXXXXXXXXFRPADSQNRVEKGVLNAGLLAADLD 203
ETL K ++L +QG +FK RP + + R + G+L+ GLL
Sbjct: 61 ETLQDKLHCLSLAEQGNLLFKGHQLSLVSSFDDIITRPVEPKCRFQAGILHTGLLV---- 116
Query: 202 KKGSLSENDSLCMCVLEAWEGVRTWIMPERQCFEFWVNHNGVSYKLEVQFGDVLETSRC 26
E D M VLE WE V+T IMPER+C EFWV+H Y+LEVQFGDV E + C
Sbjct: 117 ------EKD--VMQVLETWEDVKTLIMPERKCLEFWVSHAEECYRLEVQFGDVTEGTLC 167
>XP_002280099.1 PREDICTED: RNA-dependent RNA polymerase 2 [Vitis vinifera]
CBI15062.3 unnamed protein product, partial [Vitis
vinifera]
Length = 1127
Score = 171 bits (434), Expect = 5e-46
Identities = 93/184 (50%), Positives = 115/184 (62%)
Frame = -2
Query: 562 MGVEERPTLTVKVSNIPRTAIAKELFDFFESIIGKGSVFACEIFSDHKNWKARDSGRVQF 383
M V ERPT VKVSNIP+TAIAKEL+ F ES +G +++A EI ++HKNWK+R GRVQF
Sbjct: 1 MAVGERPT--VKVSNIPKTAIAKELWSFLESKLGPNTIYALEIATEHKNWKSRGFGRVQF 58
Query: 382 ETLDFKSTAITLFQQGKHVFKSFNXXXXXXXXXXXFRPADSQNRVEKGVLNAGLLAADLD 203
ETL K A L QG VF+ + RP + +N+V+ GVL+ G L D
Sbjct: 59 ETLQAKRAADLLSLQGDLVFRGSSLSISATFDDIIVRPVEPRNQVDSGVLHVGFLVED-- 116
Query: 202 KKGSLSENDSLCMCVLEAWEGVRTWIMPERQCFEFWVNHNGVSYKLEVQFGDVLETSRCC 23
CM VLE+WEGV+T +MPER EFWV+ +G YKLEV F DVLE+S CC
Sbjct: 117 ----------DCMLVLESWEGVKTLVMPERNRVEFWVDKDGERYKLEVPFDDVLESSACC 166
Query: 22 LNGG 11
L GG
Sbjct: 167 LGGG 170
>KZV56554.1 RNA-dependent RNA polymerase 2-like [Dorcoceras hygrometricum]
Length = 1143
Score = 166 bits (419), Expect = 5e-44
Identities = 91/190 (47%), Positives = 120/190 (63%), Gaps = 4/190 (2%)
Frame = -2
Query: 562 MGVEE-RPTLTVKVSNIPRTAIAKELFDFFESIIGKGSVFACEIFSDHKNWKARDSGRVQ 386
MG EE RPTLTV+V NIP++AIA+ELF F ES++G+G +FA +I ++HKNWK+R GRVQ
Sbjct: 1 MGAEEKRPTLTVRVMNIPQSAIARELFAFLESLLGRGEIFAIDISTEHKNWKSRGHGRVQ 60
Query: 385 FETLDFKSTAITLFQQGKHVFKSFNXXXXXXXXXXXFRPADSQNRVEKGVLNAG---LLA 215
F+T + K A++L K +F+ + RP D NRVE NAG LLA
Sbjct: 61 FDTPETKIKALSLAHHRKLLFRGSHLVLSHSFEDIIIRPVDPNNRVE----NAGGFVLLA 116
Query: 214 ADLDKKGSLSENDSLCMCVLEAWEGVRTWIMPERQCFEFWVNHNGVSYKLEVQFGDVLET 35
G +S D CM +LE+W+ V+ W+ PE++ EF+V H G YKLEV FGDVL+T
Sbjct: 117 ------GIMSRRD--CMGILESWDEVKLWVFPEKRKLEFFVKHTGECYKLEVGFGDVLQT 168
Query: 34 SRCCLNGGTE 5
CCL G E
Sbjct: 169 QGCCLGGNKE 178
>AHL27587.1 RNA-dependent RNA polymerase 4 [Salvia miltiorrhiza]
Length = 972
Score = 163 bits (412), Expect = 4e-43
Identities = 91/185 (49%), Positives = 114/185 (61%), Gaps = 4/185 (2%)
Frame = -2
Query: 553 EERPTLTVKVSNIPRTAIAKELFDFFESIIGKGSVFACEIFSDHKNWKARDSGRVQFETL 374
E RPTLTVKV+NIP AIAK+L F ES++GKG+VFA EIF++ +NWK+R GRVQFE+
Sbjct: 8 EARPTLTVKVTNIPPIAIAKDLQAFLESVLGKGTVFAVEIFTERENWKSRGHGRVQFESP 67
Query: 373 DFKSTAITLFQQGKHVFKSFNXXXXXXXXXXXFRPADSQNRVEKG---VLNAG-LLAADL 206
+ K A++L K +FK F RP D RV G VL AG ++ AD
Sbjct: 68 EAKIEALSLSHHRKFLFKGFYLSVTHSLEEIIIRPVDPIYRVGDGGGLVLFAGIMIRAD- 126
Query: 205 DKKGSLSENDSLCMCVLEAWEGVRTWIMPERQCFEFWVNHNGVSYKLEVQFGDVLETSRC 26
CM LE+W G++ W MPER+ F+V+H G SYKLEVQFGDVLE+ C
Sbjct: 127 ------------CMGTLESWNGMKLWFMPERKKIHFFVDHGGESYKLEVQFGDVLESRGC 174
Query: 25 CLNGG 11
CL GG
Sbjct: 175 CLGGG 179