BLASTX nr result
ID: Panax24_contig00035903
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax24_contig00035903
(721 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_017228409.1 PREDICTED: uncharacterized protein LOC108203764 [... 103 6e-23
XP_017228573.1 PREDICTED: uncharacterized protein LOC108203881 [... 99 6e-21
JAU82096.1 hypothetical protein MP_TR26468_c0_g1_i1_g.77154, par... 96 4e-20
XP_018448749.1 PREDICTED: uncharacterized protein LOC108820283 [... 93 4e-19
XP_018474076.1 PREDICTED: uncharacterized protein LOC108845352 [... 96 5e-19
XP_013688957.1 PREDICTED: uncharacterized protein LOC106392703 [... 94 9e-19
XP_013588986.1 PREDICTED: uncharacterized protein LOC106297253 [... 95 1e-18
XP_013661338.1 PREDICTED: uncharacterized protein LOC106366294 [... 92 2e-18
XP_018487835.1 PREDICTED: uncharacterized protein LOC108858402 [... 91 3e-18
XP_018508427.1 PREDICTED: uncharacterized protein LOC108869001 [... 91 6e-18
XP_009103844.1 PREDICTED: uncharacterized protein LOC103829912 [... 91 6e-18
XP_019095488.1 PREDICTED: uncharacterized protein LOC104763031 [... 92 8e-18
XP_013594851.1 PREDICTED: uncharacterized protein LOC106303018 [... 91 9e-18
XP_018508458.1 PREDICTED: uncharacterized protein LOC103831481 [... 90 1e-17
XP_013704410.1 PREDICTED: uncharacterized protein LOC106408135 [... 90 1e-17
JAU28950.1 Putative ribonuclease H protein, partial [Noccaea cae... 91 2e-17
JAU25120.1 LINE-1 retrotransposable element ORF2 protein, partia... 91 2e-17
JAU74353.1 hypothetical protein LE_TR15446_c14_g1_i1_g.48810, pa... 91 2e-17
XP_009109968.2 PREDICTED: uncharacterized protein LOC103835538 [... 89 2e-17
XP_009105603.1 PREDICTED: uncharacterized protein LOC103831475 [... 89 2e-17
>XP_017228409.1 PREDICTED: uncharacterized protein LOC108203764 [Daucus carota
subsp. sativus]
Length = 295
Score = 103 bits (258), Expect = 6e-23
Identities = 66/237 (27%), Positives = 117/237 (49%), Gaps = 4/237 (1%)
Frame = +2
Query: 14 TLLSNSGLPASTIVNHIILNDSWNLPMSNHHDMIMLRREIHLLPSPTQQHDRILCDTWDI 193
T++S + + + ILN SWNLP SNH D+ LRR + +P + D I ++
Sbjct: 55 TIISLADSSTNALAGQYILNGSWNLPPSNHLDLRNLRRIVSAVP--IRGRDNISWNSLTG 112
Query: 194 RLLKSKQIWESICTRNQLVHWSSFVWHKLHVPRYSFMLWPDFLKKLPTNDRTLHYSGRT- 370
+++ IW S+ W+S VWH L +P+ +F LW +L T DR ++ +T
Sbjct: 113 NMVRVSSIWNSMHMLPSPPMWTSAVWHPLAIPKCAFTLWLALKGRLLTKDRMQRFNMQTD 172
Query: 371 WNCPLCNLVPETFNHLFFECAFSNHILHQEINLGNWGSFPDSWDAVV--DFLTDF*GSSL 544
C LC+ E +H+F C F + IL G+ F W++ V +FL +
Sbjct: 173 LKCELCHNAVENHSHIFGSCPFIDFILS-----GHSFQFTGCWESYVRGNFLLGR-PQGI 226
Query: 545 SRNILCLTVAVCFNKIWEAHNNKLHRKSIPPMISLAK-DVIHIIKSRLNTCKSFLKA 712
+ + L +A+ +W+ N ++H ++ P S+ + + +++ +L++C F KA
Sbjct: 227 RKQLGALFIAISIYLVWQERNARIHNRAHPTPESIIRFNAKRMLREKLHSCHQFQKA 283
>XP_017228573.1 PREDICTED: uncharacterized protein LOC108203881 [Daucus carota
subsp. sativus]
Length = 295
Score = 98.6 bits (244), Expect = 6e-21
Identities = 67/225 (29%), Positives = 108/225 (48%), Gaps = 4/225 (1%)
Frame = +2
Query: 53 VNHIILNDSWNLPMSNHHDMIMLRREIHLLPSPTQQHDRILCDTWDIRLLKSKQIWESIC 232
+N II + SW L +SN D+I++ H + D IL D + LK+K IW+S
Sbjct: 68 LNTIIRDGSWYLGVSN--DLIIIEIRQHCNSTTIYDSDEILWDGQIVHSLKAKDIWDSSR 125
Query: 233 TRNQLVHWSSFVWHKLHVPRYSFMLWPDFLKKLPTNDR-TLHYSGRTWNCPLCNLVPETF 409
+ W SFVW K +P+ +F +W ++L T DR L + C LC L E+
Sbjct: 126 IPGTMPPWFSFVWCKFRIPKVAFTVWLIVQERLLTKDRMQLFHMAVNRTCVLCGLADESH 185
Query: 410 NHLFFECAFSNHIL---HQEINLGNWGSFPDSWDAVVDFLTDF*GSSLSRNILCLTVAVC 580
HLF F+ I H I+ +W F ++ + + S+ ++ L V+V
Sbjct: 186 AHLFCSSTFTRSIYASWHWPIS-ADWNDF-----SLGNIIVSPGLRSIEYDMSNLFVSVV 239
Query: 581 FNKIWEAHNNKLHRKSIPPMISLAKDVIHIIKSRLNTCKSFLKAT 715
+W N+++H S SL +V ++S+L+TCK F+ +T
Sbjct: 240 LYSVWRERNSRIHSLSSRDAASLIDEVKSTVRSKLSTCKFFIAST 284
>JAU82096.1 hypothetical protein MP_TR26468_c0_g1_i1_g.77154, partial [Noccaea
caerulescens]
Length = 278
Score = 95.9 bits (237), Expect = 4e-20
Identities = 68/231 (29%), Positives = 110/231 (47%), Gaps = 11/231 (4%)
Frame = +2
Query: 29 SGLPASTIVNHIILNDSWNLPMSNHHDMIMLRREIHLLPS---PTQQHDRILCDTWDIRL 199
SG+ + V+ I +D+W+LP H +I+LR + +PS + Q + +T D+
Sbjct: 21 SGIRSMATVSQAIEDDTWSLPRGRHPLLILLRNCLSPVPSGSLDSAQDTFLWRNTLDLPP 80
Query: 200 LKSKQI--WESICTRNQLVHWSSFVWHKLHVPRYSFMLWPDFLKKLPTNDRTLHYSGRTW 373
K + W S+ V W + VW K H+P+++FMLW +LPT DR R+W
Sbjct: 81 GKFSAVKTWNSLHPHPPTVTWHNTVWFKDHIPKHAFMLWLTVQNRLPTRDRL-----RSW 135
Query: 374 ------NCPLCNLVPETFNHLFFECAFSNHILHQEINLGNWGSFPDSWDAVVDFLTDF*G 535
C LC ET +HLFF C++S + + G S S+D +V ++
Sbjct: 136 GLVVPDGCLLCGSSTETRDHLFFTCSYSRSVWNAFFTHGAL-SPSASFDDIVLWVCSSFN 194
Query: 536 SSLSRNILCLTVAVCFNKIWEAHNNKLHRKSIPPMISLAKDVIHIIKSRLN 688
S+ + I L IW N +LH S SL KD+ +++++L+
Sbjct: 195 STKLKTICKLIFQAVVYFIWTERNARLHTPSSKTSHSLVKDIQLLLRAKLS 245
>XP_018448749.1 PREDICTED: uncharacterized protein LOC108820283 [Raphanus sativus]
Length = 251
Score = 92.8 bits (229), Expect = 4e-19
Identities = 63/227 (27%), Positives = 106/227 (46%), Gaps = 10/227 (4%)
Frame = +2
Query: 32 GLPASTIVNHIILNDSWNLPMSNHHDMIMLRREIHL---LPSPTQQHDRILCDTWDIRLL 202
G+P+ ++V+ I+N SWNLP + + LR + + PS Q H + ++
Sbjct: 10 GIPSDSLVSDFIINGSWNLPPARSD--LHLRAMVFISAVTPSAQQDHATWIVNSITYSQF 67
Query: 203 KSKQIWESICTRNQLVHWSSFVWHKLHVPRYSFMLWPDFLKKLPTNDRTLHYSGRTWN-- 376
SK +W +I R Q + +S WH +P++S W L + PT R ++WN
Sbjct: 68 SSKIMWNAIRPRQQTLTGASVAWHTAIIPKHSTNAWLFLLNRNPTLMRI-----KSWNSD 122
Query: 377 ----CPLCNLVPETFNHLFFECAFS-NHILHQEINLGNWGSFPDSWDAVVDFLTDF*GSS 541
C LC L E +HLFFEC++S + +NLG + S P WD V+ +L +
Sbjct: 123 IETTCVLCGLSDENRDHLFFECSYSWTCWSNCALNLG-FTSVPRGWDPVILWLLSLSKRA 181
Query: 542 LSRNILCLTVAVCFNKIWEAHNNKLHRKSIPPMISLAKDVIHIIKSR 682
S A ++W N +LH + P + L + ++ ++ +
Sbjct: 182 PSSVAAYQVWAAVLYEVWTERNRRLHDGTTFPEVVLIRSIMRTVRDK 228
>XP_018474076.1 PREDICTED: uncharacterized protein LOC108845352 [Raphanus sativus]
Length = 882
Score = 95.9 bits (237), Expect = 5e-19
Identities = 65/239 (27%), Positives = 117/239 (48%), Gaps = 7/239 (2%)
Frame = +2
Query: 26 NSGLPASTIVNHIILNDSWNLPMSNHHDMIMLRREIHLLPSPTQQHDRILCDTWDIRLLK 205
N G+P + + +N +W LP + ++ L +HL + TQ +D+ W+I
Sbjct: 642 NLGIPDDASLASLCINGNWLLPPARSDQLVSLH--VHL--TTTQLNDQADYYEWEIDGRI 697
Query: 206 SKQ-----IWESICTRNQLVHWSSFVWHKLHVPRYSFMLWPDFLKKLPTNDRTLHYSGRT 370
S++ I+ +C +V W + VW+K +PR+SF+ W L + PT DRT+ + +T
Sbjct: 698 SERYSTGTIYAKLCEEGAIVPWFNSVWNKGGIPRHSFLAWLFVLNRCPTKDRTMRWGHQT 757
Query: 371 WN-CPLCNLVPETFNHLFFECAFSNHILHQEINLGNWGSFPD-SWDAVVDFLTDF*GSSL 544
C LCN+ E +HLFF C +S + E G P+ +WD V+ + S
Sbjct: 758 TPLCLLCNVSDENRDHLFFCCDYSWSV--WEPLSRRCGILPERNWDQVLSQIQSTTPRST 815
Query: 545 SRNILCLTVAVCFNKIWEAHNNKLHRKSIPPMISLAKDVIHIIKSRLNTCKSFLKATNS 721
+L + C +W+ N +LHR+S P +A+ + ++ ++++ +S +S
Sbjct: 816 QGMLLRICWQGCIYWLWQERNARLHRQSFRPADLVARLLERQVRYKISSLRSISPVVSS 874
>XP_013688957.1 PREDICTED: uncharacterized protein LOC106392703 [Brassica napus]
Length = 353
Score = 93.6 bits (231), Expect = 9e-19
Identities = 62/223 (27%), Positives = 104/223 (46%), Gaps = 2/223 (0%)
Frame = +2
Query: 23 SNSGLPASTIVNHIILNDSWNLPMSNHHDMIMLRREIHLLPSPTQQHDRILCDTWDIRLL 202
S +G+P++ + + D W LP + + + + + L + + C +
Sbjct: 102 SRTGIPSTATLAELWEIDHWVLPPARSDNQVRIYTFLLQLTITGEADVYVWCPGGSQKTR 161
Query: 203 KS-KQIWESICTRNQLVHWSSFVWHKLHVPRYSFMLWPDFLKKLPTNDRTLHYSGRTWN- 376
S +Q++ + + V W VW +P++ F+ W L + PT DR +++ T
Sbjct: 162 YSTRQVYNLLQEQLPQVSWYKEVWFSKGIPKHRFLTWLMVLNRSPTRDRLMNWGLITDGA 221
Query: 377 CPLCNLVPETFNHLFFECAFSNHILHQEINLGNWGSFPDSWDAVVDFLTDF*GSSLSRNI 556
C CN ET +HLFF+C+FS I I+ S P SW ++DFL +F G+ R +
Sbjct: 222 CLFCNSSLETRSHLFFDCSFSWDIWSSLIHRMQHQS-PCSWLEILDFLHNFAGTKAERYL 280
Query: 557 LCLTVAVCFNKIWEAHNNKLHRKSIPPMISLAKDVIHIIKSRL 685
L LT +W N++LHR + SL D+ IK R+
Sbjct: 281 LLLTWQATIYALWTERNHRLHRNNYRSASSLTSDIDRTIKRRI 323
>XP_013588986.1 PREDICTED: uncharacterized protein LOC106297253 [Brassica oleracea
var. oleracea]
Length = 1689
Score = 94.7 bits (234), Expect = 1e-18
Identities = 66/225 (29%), Positives = 103/225 (45%), Gaps = 8/225 (3%)
Frame = +2
Query: 35 LPASTIVNHIILNDSWNLPMSNHHDMIMLRREIHLLPSPTQQHDRIL----CDTWDI-RL 199
+P + V+ N +WNLP + + + L+ + + P + + + W +
Sbjct: 1440 IPVNYTVSSAAENGAWNLPSARSDEALTLQIVLTTMQPPEESRGKDIFLWRSGDWSFSKR 1499
Query: 200 LKSKQIWESICTRNQLVHWSSFVWHKLHVPRYSFMLWPDFLKKLPTNDRTLHYS-GRTWN 376
SK IW + R+ V W VW K VPRYSF+ W +++LPT DR + +
Sbjct: 1500 FSSKAIWNVLRQRSPAVPWCDLVWFKEAVPRYSFVSWMTMVERLPTRDRLISWGMSVPAA 1559
Query: 377 CPLCNLVPETFNHLFFECAFSNHILHQEINLGNWGSFPDSWDAVVDFLTDF*GSSLS--R 550
CPLC+L E+ +HLFF C FS + + + P S AV+ L SS S
Sbjct: 1560 CPLCSLANESHDHLFFNCVFSTAVWSHYTG-WMFAAAPASPAAVLAILDQPHISSCSGAA 1618
Query: 551 NILCLTVAVCFNKIWEAHNNKLHRKSIPPMISLAKDVIHIIKSRL 685
IL L + V +W N+++ R+S ++ V IK RL
Sbjct: 1619 VILKLLMQVIVYNLWTERNHRIFRQSSSSEAAIISKVDRSIKDRL 1663
>XP_013661338.1 PREDICTED: uncharacterized protein LOC106366294 [Brassica napus]
XP_013661360.1 PREDICTED: uncharacterized protein
LOC106366311 [Brassica napus] XP_013661371.1 PREDICTED:
uncharacterized protein LOC106366322 [Brassica napus]
Length = 299
Score = 91.7 bits (226), Expect = 2e-18
Identities = 65/228 (28%), Positives = 95/228 (41%), Gaps = 24/228 (10%)
Frame = +2
Query: 5 PSSTLLSNSG-----LPASTIVNHIILNDSWNLPMSNHHDMIMLRREIHLLPSPTQQHDR 169
P L SG +P V+ + ND WNLP + L+ + LP P+
Sbjct: 34 PLHLLFGTSGPRDLRIPLDATVSQAVTNDHWNLPPARSEYATTLQIILSTLPVPSATDG- 92
Query: 170 ILCDTWDIRL--------LKSKQIWESICTRNQLVHWSSFVWHKLHVPRYSFMLWPDFLK 325
CDT+ R SK WE + + LV W S W + +PR SF+ W FL+
Sbjct: 93 --CDTYLWRTSSGAFGNTFSSKVTWERMRVPSPLVQWHSVAWFREEIPRCSFIAWTAFLR 150
Query: 326 KLPTNDRTLHYSGRTW-NCPLCNLVPETFNHLFFECAFSNHILHQEINLGNWGSF----- 487
+LPT DR + + C LC++ E+ +HLFF+C F+ + W F
Sbjct: 151 RLPTRDRLISWGLNVQPGCVLCSVADESISHLFFDCPFA---------VATWTRFCGRFL 201
Query: 488 ---PDSWDAVVDFLTDF*GSSLSRNILCLTV--AVCFNKIWEAHNNKL 616
P + DAVV F G R + + + V IW N ++
Sbjct: 202 ATPPATLDAVVVLCQHFPGPHARRAVAVMKLINQVIIYNIWRERNARI 249
>XP_018487835.1 PREDICTED: uncharacterized protein LOC108858402 [Raphanus sativus]
Length = 275
Score = 90.9 bits (224), Expect = 3e-18
Identities = 63/222 (28%), Positives = 100/222 (45%), Gaps = 4/222 (1%)
Frame = +2
Query: 32 GLPASTIVNHIILNDSWNLPMSNHHDMIMLRREIHLLPSPTQQHDRILCDTWDIRLLK-S 208
G+P + V+ + D W LP + + L + L Q I + + +
Sbjct: 35 GIPRDSTVDELWEIDHWVLPAARSDKQVQLYSFLTSLTLSNQSDSMIWAPSGNNETTYCT 94
Query: 209 KQIWESICTRNQLVHWSSFVWHKLHVPRYSFMLWPDFLKKLPTNDRTLHYSGRT-WNCPL 385
++I+ I + V WS VW +P+YSF+ W L + PT DR L + +T C L
Sbjct: 95 RRIYNLIREQGAEVTWSKEVWFSRGIPKYSFLTWLMVLNRCPTKDRLLQWGLQTDGTCSL 154
Query: 386 CNLVPETFNHLFFECAFSNHILHQEINLGNWGSFPD--SWDAVVDFLTDF*GSSLSRNIL 559
N+ E+ +HLFF CA+S I L + S P SW+A + L F G R +L
Sbjct: 155 SNMQLESRDHLFFYCAYSWEIW---FVLASRCSIPPLRSWEATIAQLQHFAGRKAHRYLL 211
Query: 560 CLTVAVCFNKIWEAHNNKLHRKSIPPMISLAKDVIHIIKSRL 685
L W+ NN++HR S S+ ++ +I+ R+
Sbjct: 212 LLVWQATIYHSWQERNNRIHRSSFKSAASIIFELDKVIRQRI 253
>XP_018508427.1 PREDICTED: uncharacterized protein LOC108869001 [Brassica rapa]
Length = 299
Score = 90.5 bits (223), Expect = 6e-18
Identities = 65/228 (28%), Positives = 94/228 (41%), Gaps = 24/228 (10%)
Frame = +2
Query: 5 PSSTLLSNSG-----LPASTIVNHIILNDSWNLPMSNHHDMIMLRREIHLLPSPTQQHDR 169
P L SG +P V+ + ND WNLP + L + LP P+
Sbjct: 34 PLHLLFGTSGPRDLRIPLDATVSQAVTNDHWNLPPARSEYATTLPIILSALPVPSATDG- 92
Query: 170 ILCDTWDIRL--------LKSKQIWESICTRNQLVHWSSFVWHKLHVPRYSFMLWPDFLK 325
CDT+ R SK WE + + LV W S W + +PR SF+ W FL+
Sbjct: 93 --CDTYLWRTSSGAFGNTFSSKVTWERMRVPSPLVQWHSVAWFREEIPRCSFIAWTAFLR 150
Query: 326 KLPTNDRTLHYSGRTW-NCPLCNLVPETFNHLFFECAFSNHILHQEINLGNWGSF----- 487
+LPT DR + + C LC++ E+ +HLFF+C F+ + W F
Sbjct: 151 RLPTRDRLISWGLNVQPGCVLCSVADESISHLFFDCPFA---------VATWTRFCGRFL 201
Query: 488 ---PDSWDAVVDFLTDF*GSSLSRNILCLTV--AVCFNKIWEAHNNKL 616
P + DAVV F G R + + + V IW N ++
Sbjct: 202 ATPPATLDAVVVLCQHFPGPHARRAVAVMKLINQVIIYNIWRERNARI 249
>XP_009103844.1 PREDICTED: uncharacterized protein LOC103829912 [Brassica rapa]
Length = 299
Score = 90.5 bits (223), Expect = 6e-18
Identities = 67/220 (30%), Positives = 99/220 (45%), Gaps = 15/220 (6%)
Frame = +2
Query: 71 NDSWNLPMSNHHDMIMLRREIHLL--PSPTQQHDRILCDTWDIRLL---KSKQIWESICT 235
N W LP + + L+ + + PSP + D L + L SK W I
Sbjct: 61 NGLWTLPPARSDEAETLQVVLSTMQPPSPVRGQDSFLWRSGACSFLPKFSSKATWNIIRE 120
Query: 236 RNQLVHWSSFVWHKLHVPRYSFMLWPDFLKKLPTNDRTLHYSGRTWN------CPLCNLV 397
+ LV W+ VW K +PRYSF+ W L +LPT DR + +W CPLC+L
Sbjct: 121 PSPLVSWNKMVWFKEEIPRYSFVSWMALLSRLPTRDRLI-----SWGLLVPPVCPLCSLD 175
Query: 398 PETFNHLFFECAFSNHILHQEINLGNW--GSFPDSWDAVVDF--LTDF*GSSLSRNILCL 565
ET +HLFF C FS I + W + P ++ +V D L S + +L L
Sbjct: 176 SETHDHLFFTCTFSTAIWS---HFAGWMFPTPPLAFASVADIMNLPRITSRSGAGTVLKL 232
Query: 566 TVAVCFNKIWEAHNNKLHRKSIPPMISLAKDVIHIIKSRL 685
+ IW N+++ R S + ++AK V ++ RL
Sbjct: 233 LLQAIVYSIWRERNHRIFRDSSSTVAAIAKVVDRSMRDRL 272
>XP_019095488.1 PREDICTED: uncharacterized protein LOC104763031 [Camelina sativa]
Length = 696
Score = 92.4 bits (228), Expect = 8e-18
Identities = 64/235 (27%), Positives = 102/235 (43%), Gaps = 6/235 (2%)
Frame = +2
Query: 32 GLPASTIVNHIILNDSWNLPMSNHHDMIMLRREIHLLPSPTQQHDRILCDTWDI-----R 196
G+P + +V+ WNLP + + + I +P +W + +
Sbjct: 449 GIPVTALVSDYKEGAIWNLPQARSDCFLDVLSFITTIPHSNDNDS----PSWIVNSKVQK 504
Query: 197 LLKSKQIWESICTRNQLVHWSSFVWHKLHVPRYSFMLWPDFLKKLPTNDRTLHYSGRTWN 376
SK +W S+ LV W S VWHK VP++S W + PT DR + +
Sbjct: 505 SYNSKVMWNSLRLSRPLVPWYSIVWHKAAVPKHSIATWLFLRNRNPTLDRMIKWGFDVEP 564
Query: 377 -CPLCNLVPETFNHLFFECAFSNHILHQEINLGNWGSFPDSWDAVVDFLTDF*GSSLSRN 553
C LC + ET NHLFF CA+S+ I + + S P +W+ +V +L SS++
Sbjct: 565 LCLLCGMENETRNHLFFACAYSSAIWTEMVGKLEL-SPPLNWELIVHWLPSATSSSVTSL 623
Query: 554 ILCLTVAVCFNKIWEAHNNKLHRKSIPPMISLAKDVIHIIKSRLNTCKSFLKATN 718
L C +IW+ N H + P + + ++KSR ++ ATN
Sbjct: 624 ALLQVWQACIYEIWKERNRHFHEGTTLPHSIIVRKTCLVVKSRATALRNL--ATN 676
>XP_013594851.1 PREDICTED: uncharacterized protein LOC106303018 [Brassica oleracea
var. oleracea]
Length = 324
Score = 90.5 bits (223), Expect = 9e-18
Identities = 68/227 (29%), Positives = 98/227 (43%), Gaps = 21/227 (9%)
Frame = +2
Query: 5 PSSTLLSNSG-----LPASTIVNHIILNDSWNLPMSNHHDMIMLRREIHLL--PSPTQQH 163
P LL +SG +P S IV+ + N WNLP + + + L+ + + PS T
Sbjct: 59 PLILLLGSSGPRSLRIPLSAIVSQAVRNGHWNLPPTPSENALTLQIILSTMSVPSATSTD 118
Query: 164 DRILCDTWDIRL---LKSKQIWESICTRNQLVHWSSFVWHKLHVPRYSFMLWPDFLKKLP 334
D L S+ WE I N V W VW K VPRYSF+ W FL +LP
Sbjct: 119 DVYLWRQGTGGFGPSFSSRVTWERIRVPNPPVDWHKVVWFKDEVPRYSFITWTAFLGRLP 178
Query: 335 TNDRTLHYSGRT-WNCPLCNLVPETFNHLFFECAFSNHILHQEINLGNWGSF-------- 487
T DR + + + C LC+L E+ +HLFF+C+F+ + W F
Sbjct: 179 TRDRLISWGLQVPPGCVLCSLADESISHLFFDCSFA---------VATWSRFCGRYMVSP 229
Query: 488 PDSWDAVVDFLTDF*GSSLSRNILCLTV--AVCFNKIWEAHNNKLHR 622
P S AVV + G R + L + V +W N ++ +
Sbjct: 230 PASLAAVVSLCQNLQGPHAPRAVAVLKLLNQVVIYSLWRERNARIFK 276
>XP_018508458.1 PREDICTED: uncharacterized protein LOC103831481 [Brassica rapa]
Length = 297
Score = 89.7 bits (221), Expect = 1e-17
Identities = 67/244 (27%), Positives = 104/244 (42%), Gaps = 19/244 (7%)
Frame = +2
Query: 11 STLLSNSGLPASTIVNHIILNDSWNLPMSNHHDMIMLRREIHLLPSPTQQHDRILCDTWD 190
ST LP S V + + WNLP + + + L+ + P P +D+ D++
Sbjct: 41 STASRTLRLPISATVADAVRDGHWNLPSARSQNAVTLQIVLTTTPVPAPANDK---DSFL 97
Query: 191 IRL--------LKSKQIWESICTRNQLVHWSSFVWHKLHVPRYSFMLWPDFLKKLPTNDR 346
R S W+ + R+ V W VW + VPRYSF+ W FL +LPT DR
Sbjct: 98 WRSHTGGFGAKFSSSVTWDFLRQRSPAVEWHEVVWFREEVPRYSFITWLSFLGRLPTKDR 157
Query: 347 TLHYS-GRTWNCPLCNLVPETFNHLFFECAFSNHILHQEINLGNWGSF--------PDSW 499
+ + C LC+ E+ HLFFEC F+ I W F P
Sbjct: 158 LIFWGLAVPDRCVLCSSHLESHQHLFFECLFAASI---------WSMFCGRFITSPPSDL 208
Query: 500 DAVVDFLTDF*GSSLS--RNILCLTVAVCFNKIWEAHNNKLHRKSIPPMISLAKDVIHII 673
+VV +T + G LS + I+ L + V +W N ++ R ++ + V ++
Sbjct: 209 SSVVLMITRYNGLYLSQVKTIMKLLLQVIVYSLWRERNARIFRDVAHQPVAFFRIVDRLM 268
Query: 674 KSRL 685
+ RL
Sbjct: 269 RDRL 272
>XP_013704410.1 PREDICTED: uncharacterized protein LOC106408135 [Brassica napus]
Length = 299
Score = 89.7 bits (221), Expect = 1e-17
Identities = 66/227 (29%), Positives = 97/227 (42%), Gaps = 21/227 (9%)
Frame = +2
Query: 5 PSSTLLSNSG-----LPASTIVNHIILNDSWNLPMSNHHDMIMLRREIHLL--PSPTQQH 163
P LL +SG +P S V+ ++ N WNLP + + + L+ + + PS
Sbjct: 34 PLILLLGSSGPRSLRIPLSATVSQVVCNGHWNLPPARSENALTLQIILSTMSVPSAASSD 93
Query: 164 DRILCDTWDIRL---LKSKQIWESICTRNQLVHWSSFVWHKLHVPRYSFMLWPDFLKKLP 334
D L S+ WE I N V W VW K VPRYSF+ W FL +LP
Sbjct: 94 DVYLWRQGSGGFGPSFSSRVTWERIRVPNPPVDWHKVVWFKEEVPRYSFISWTAFLGRLP 153
Query: 335 TNDRTLHYSGRT-WNCPLCNLVPETFNHLFFECAFSNHILHQEINLGNWGSF-------- 487
T DR + + + C LC+L E+ +HLFF+C+F+ + W F
Sbjct: 154 TRDRLISWGLQVPPGCVLCSLADESISHLFFDCSFA---------VATWSRFCGRYLASP 204
Query: 488 PDSWDAVVDFLTDF*GSSLSRNILCLTV--AVCFNKIWEAHNNKLHR 622
P S AVV + G R + L + V +W N ++ +
Sbjct: 205 PTSLAAVVSLCHNLQGPYAPRAVAVLKLLNQVVIYSLWRERNARIFK 251
>JAU28950.1 Putative ribonuclease H protein, partial [Noccaea caerulescens]
Length = 533
Score = 91.3 bits (225), Expect = 2e-17
Identities = 57/201 (28%), Positives = 91/201 (45%), Gaps = 2/201 (0%)
Frame = +2
Query: 23 SNSGLPASTIVNHIILNDSWNLPMSNHHDMIMLRREIH-LLPSPTQQHDRILCDTWDIRL 199
+N G+P +V I D W LP + + + I ++PS + + D
Sbjct: 284 TNLGIPLQALVKDYISGDGWILPPARSDRHVEVFSYISSIVPSQSNDYPIWKVDDQIRTS 343
Query: 200 LKSKQIWESICTRNQLVHWSSFVWHKLHVPRYSFMLWPDFLKKLPTNDRTLHYS-GRTWN 376
SK+IW I N V W S VW+++ +P++S W L + PT +R + +
Sbjct: 344 FVSKEIWGKIRLVNPEVPWHSLVWNRVAIPKHSTTAWLFMLDRNPTLNRLVSWGLDIEST 403
Query: 377 CPLCNLVPETFNHLFFECAFSNHILHQEINLGNWGSFPDSWDAVVDFLTDF*GSSLSRNI 556
C LC L E+ +HLFF C+FSNHI Q ++ S P W+ ++ +L S +
Sbjct: 404 CLLCGLEQESRDHLFFVCSFSNHIWLQLMHRLRLSSVPSQWEDILSWLPSASSSPIISLA 463
Query: 557 LCLTVAVCFNKIWEAHNNKLH 619
C +IW N ++H
Sbjct: 464 RLQGWQACIYEIWRERNRRVH 484
>JAU25120.1 LINE-1 retrotransposable element ORF2 protein, partial [Noccaea
caerulescens]
Length = 942
Score = 91.3 bits (225), Expect = 2e-17
Identities = 57/201 (28%), Positives = 91/201 (45%), Gaps = 2/201 (0%)
Frame = +2
Query: 23 SNSGLPASTIVNHIILNDSWNLPMSNHHDMIMLRREIH-LLPSPTQQHDRILCDTWDIRL 199
+N G+P +V I D W LP + + + I ++PS + + D
Sbjct: 693 TNLGIPLQALVKDYISGDGWILPPARSDRHVEVFSYISSIVPSQSNDYPIWKVDDQIRTS 752
Query: 200 LKSKQIWESICTRNQLVHWSSFVWHKLHVPRYSFMLWPDFLKKLPTNDRTLHYS-GRTWN 376
SK+IW I N V W S VW+++ +P++S W L + PT +R + +
Sbjct: 753 FVSKEIWGKIRLVNPEVPWHSLVWNRVAIPKHSTTAWLFMLDRNPTLNRLVSWGLDIEST 812
Query: 377 CPLCNLVPETFNHLFFECAFSNHILHQEINLGNWGSFPDSWDAVVDFLTDF*GSSLSRNI 556
C LC L E+ +HLFF C+FSNHI Q ++ S P W+ ++ +L S +
Sbjct: 813 CLLCGLEQESRDHLFFVCSFSNHIWLQLMHRLRLSSVPSQWEDILSWLPSASSSPIISLA 872
Query: 557 LCLTVAVCFNKIWEAHNNKLH 619
C +IW N ++H
Sbjct: 873 RLQGWQACIYEIWRERNRRVH 893
>JAU74353.1 hypothetical protein LE_TR15446_c14_g1_i1_g.48810, partial [Noccaea
caerulescens]
Length = 1124
Score = 91.3 bits (225), Expect = 2e-17
Identities = 57/201 (28%), Positives = 91/201 (45%), Gaps = 2/201 (0%)
Frame = +2
Query: 23 SNSGLPASTIVNHIILNDSWNLPMSNHHDMIMLRREIH-LLPSPTQQHDRILCDTWDIRL 199
+N G+P +V I D W LP + + + I ++PS + + D
Sbjct: 875 TNLGIPLQALVKDYISGDGWILPPARSDRHVEVFSYISSIVPSQSNDYPIWKVDDQIRTS 934
Query: 200 LKSKQIWESICTRNQLVHWSSFVWHKLHVPRYSFMLWPDFLKKLPTNDRTLHYS-GRTWN 376
SK+IW I N V W S VW+++ +P++S W L + PT +R + +
Sbjct: 935 FVSKEIWGKIRLVNPEVPWHSLVWNRVAIPKHSTTAWLFMLDRNPTLNRLVSWGLDIEST 994
Query: 377 CPLCNLVPETFNHLFFECAFSNHILHQEINLGNWGSFPDSWDAVVDFLTDF*GSSLSRNI 556
C LC L E+ +HLFF C+FSNHI Q ++ S P W+ ++ +L S +
Sbjct: 995 CLLCGLEQESRDHLFFVCSFSNHIWLQLMHRLRLSSVPSQWEDILSWLPSASSSPIISLA 1054
Query: 557 LCLTVAVCFNKIWEAHNNKLH 619
C +IW N ++H
Sbjct: 1055 RLQGWQACIYEIWRERNRRVH 1075
>XP_009109968.2 PREDICTED: uncharacterized protein LOC103835538 [Brassica rapa]
Length = 297
Score = 89.0 bits (219), Expect = 2e-17
Identities = 67/241 (27%), Positives = 102/241 (42%), Gaps = 16/241 (6%)
Frame = +2
Query: 11 STLLSNSGLPASTIVNHIILNDSWNLPMSNHHDMIMLRREIHL--LPSPTQQHDRILCDT 184
ST LP S V + + WNLP + + + L+ + +P+P D L +
Sbjct: 41 STASRTLRLPISATVADAVRDGHWNLPSARSQNAVTLQIVLTTTPVPAPANDKDSFLWGS 100
Query: 185 WDIRL---LKSKQIWESICTRNQLVHWSSFVWHKLHVPRYSFMLWPDFLKKLPTNDRTLH 355
R S W+ + R+ V W VW + V RYSF+ W FL +LPT DR +
Sbjct: 101 HTGRFGAKFSSSVTWDFLRQRSPAVEWHEVVWFREEVSRYSFITWLSFLGRLPTRDRLIS 160
Query: 356 YS-GRTWNCPLCNLVPETFNHLFFECAFSNHILHQEINLGNWGSF--------PDSWDAV 508
+ C LC+ E+ HLFFEC F+ I W F P +V
Sbjct: 161 WGLAVPDRCVLCSSHLESHQHLFFECLFAASI---------WSMFCGRFITSPPSDLSSV 211
Query: 509 VDFLTDF*G--SSLSRNILCLTVAVCFNKIWEAHNNKLHRKSIPPMISLAKDVIHIIKSR 682
V +T + G SS + I+ L + V +W N ++ R ++ + V I++ R
Sbjct: 212 VLMITRYNGLYSSQVKTIMKLLLQVIVYSLWRERNARIFRDVARQPVAFFRIVDRIMRDR 271
Query: 683 L 685
L
Sbjct: 272 L 272
>XP_009105603.1 PREDICTED: uncharacterized protein LOC103831475 [Brassica rapa]
Length = 299
Score = 89.0 bits (219), Expect = 2e-17
Identities = 66/227 (29%), Positives = 97/227 (42%), Gaps = 21/227 (9%)
Frame = +2
Query: 5 PSSTLLSNSG-----LPASTIVNHIILNDSWNLPMSNHHDMIMLRREIHLL--PSPTQQH 163
P LL +SG +P S V+ ++ N WNLP + + + L+ + + PS
Sbjct: 34 PLILLLGSSGPRSLRIPLSATVSQVVRNGHWNLPPARSENALTLQIILSTMSVPSAASSD 93
Query: 164 DRILCDTWDIRL---LKSKQIWESICTRNQLVHWSSFVWHKLHVPRYSFMLWPDFLKKLP 334
D L S+ WE I N V W VW K VPRYSF+ W FL +LP
Sbjct: 94 DVYLWRQGSGGFGPSFSSRVTWERIRVPNPPVDWHKVVWFKEEVPRYSFISWTAFLGRLP 153
Query: 335 TNDRTLHYSGRT-WNCPLCNLVPETFNHLFFECAFSNHILHQEINLGNWGSF-------- 487
T DR + + + C LC+L E+ +HLFF+C+F+ + W F
Sbjct: 154 TRDRLISWGLQVPPGCVLCSLADESISHLFFDCSFA---------VATWSRFCGRYLASP 204
Query: 488 PDSWDAVVDFLTDF*GSSLSRNILCLTV--AVCFNKIWEAHNNKLHR 622
P S AVV + G R + L + V +W N ++ +
Sbjct: 205 PASLAAVVSLCHNLQGPYAPRAVAVLKLLNQVVIYSLWRERNARIFK 251