BLASTX nr result

ID: Panax24_contig00035784 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00035784
         (446 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017247870.1 PREDICTED: zinc finger protein VAR3, chloroplasti...    80   6e-15
KZM98132.1 hypothetical protein DCAR_014506 [Daucus carota subsp...    80   7e-15
CDO98343.1 unnamed protein product [Coffea canephora]                  57   1e-06

>XP_017247870.1 PREDICTED: zinc finger protein VAR3, chloroplastic [Daucus carota
           subsp. sativus]
          Length = 443

 Score = 80.5 bits (197), Expect = 6e-15
 Identities = 41/90 (45%), Positives = 54/90 (60%)
 Frame = +1

Query: 106 STTARLISLLGGTSIFPPIQIARKLIFSSSSTLRFHRHTFXXXXXXXXXXXXXXXXTENP 285
           +T+  +IS +G  +I PP+   +KL+F S STL  HR++                  + P
Sbjct: 12  ATSRLIISYIGNRAISPPLFFTKKLLFPSYSTLHSHRYSHFSSSALASPLTDTNTAADLP 71

Query: 286 ETAVSSLHHPWPEWVSFVDRLNSKGYLSPS 375
           E+ V+S HHPWPEWV FVDRLNSKGYLS S
Sbjct: 72  ESGVNS-HHPWPEWVLFVDRLNSKGYLSNS 100


>KZM98132.1 hypothetical protein DCAR_014506 [Daucus carota subsp. sativus]
          Length = 625

 Score = 80.5 bits (197), Expect = 7e-15
 Identities = 41/90 (45%), Positives = 54/90 (60%)
 Frame = +1

Query: 106 STTARLISLLGGTSIFPPIQIARKLIFSSSSTLRFHRHTFXXXXXXXXXXXXXXXXTENP 285
           +T+  +IS +G  +I PP+   +KL+F S STL  HR++                  + P
Sbjct: 12  ATSRLIISYIGNRAISPPLFFTKKLLFPSYSTLHSHRYSHFSSSALASPLTDTNTAADLP 71

Query: 286 ETAVSSLHHPWPEWVSFVDRLNSKGYLSPS 375
           E+ V+S HHPWPEWV FVDRLNSKGYLS S
Sbjct: 72  ESGVNS-HHPWPEWVLFVDRLNSKGYLSNS 100


>CDO98343.1 unnamed protein product [Coffea canephora]
          Length = 434

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 38/98 (38%), Positives = 48/98 (48%), Gaps = 10/98 (10%)
 Frame = +1

Query: 109 TTARLISLLGGTSIFPPIQIA----------RKLIFSSSSTLRFHRHTFXXXXXXXXXXX 258
           +T+RL +L G TSIF   Q            R L   SS +LRFHR              
Sbjct: 2   STSRLFNLFG-TSIFRNHQATAFLSSIPLPFRPLKHFSSPSLRFHR-CCSSTAVLEANTP 59

Query: 259 XXXXXTENPETAVSSLHHPWPEWVSFVDRLNSKGYLSP 372
                + +P  +++S  HPWPEWVSFVDRL +KGY  P
Sbjct: 60  ATSITSGSPAVSLTSASHPWPEWVSFVDRLKTKGYFPP 97


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