BLASTX nr result
ID: Panax24_contig00035784
seq
BLASTX 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax24_contig00035784 (446 letters) Database: ./nr 115,041,592 sequences; 42,171,959,267 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value XP_017247870.1 PREDICTED: zinc finger protein VAR3, chloroplasti... 80 6e-15 KZM98132.1 hypothetical protein DCAR_014506 [Daucus carota subsp... 80 7e-15 CDO98343.1 unnamed protein product [Coffea canephora] 57 1e-06 >XP_017247870.1 PREDICTED: zinc finger protein VAR3, chloroplastic [Daucus carota subsp. sativus] Length = 443 Score = 80.5 bits (197), Expect = 6e-15 Identities = 41/90 (45%), Positives = 54/90 (60%) Frame = +1 Query: 106 STTARLISLLGGTSIFPPIQIARKLIFSSSSTLRFHRHTFXXXXXXXXXXXXXXXXTENP 285 +T+ +IS +G +I PP+ +KL+F S STL HR++ + P Sbjct: 12 ATSRLIISYIGNRAISPPLFFTKKLLFPSYSTLHSHRYSHFSSSALASPLTDTNTAADLP 71 Query: 286 ETAVSSLHHPWPEWVSFVDRLNSKGYLSPS 375 E+ V+S HHPWPEWV FVDRLNSKGYLS S Sbjct: 72 ESGVNS-HHPWPEWVLFVDRLNSKGYLSNS 100 >KZM98132.1 hypothetical protein DCAR_014506 [Daucus carota subsp. sativus] Length = 625 Score = 80.5 bits (197), Expect = 7e-15 Identities = 41/90 (45%), Positives = 54/90 (60%) Frame = +1 Query: 106 STTARLISLLGGTSIFPPIQIARKLIFSSSSTLRFHRHTFXXXXXXXXXXXXXXXXTENP 285 +T+ +IS +G +I PP+ +KL+F S STL HR++ + P Sbjct: 12 ATSRLIISYIGNRAISPPLFFTKKLLFPSYSTLHSHRYSHFSSSALASPLTDTNTAADLP 71 Query: 286 ETAVSSLHHPWPEWVSFVDRLNSKGYLSPS 375 E+ V+S HHPWPEWV FVDRLNSKGYLS S Sbjct: 72 ESGVNS-HHPWPEWVLFVDRLNSKGYLSNS 100 >CDO98343.1 unnamed protein product [Coffea canephora] Length = 434 Score = 56.6 bits (135), Expect = 1e-06 Identities = 38/98 (38%), Positives = 48/98 (48%), Gaps = 10/98 (10%) Frame = +1 Query: 109 TTARLISLLGGTSIFPPIQIA----------RKLIFSSSSTLRFHRHTFXXXXXXXXXXX 258 +T+RL +L G TSIF Q R L SS +LRFHR Sbjct: 2 STSRLFNLFG-TSIFRNHQATAFLSSIPLPFRPLKHFSSPSLRFHR-CCSSTAVLEANTP 59 Query: 259 XXXXXTENPETAVSSLHHPWPEWVSFVDRLNSKGYLSP 372 + +P +++S HPWPEWVSFVDRL +KGY P Sbjct: 60 ATSITSGSPAVSLTSASHPWPEWVSFVDRLKTKGYFPP 97