BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00035528
         (450 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_011022023.1 PREDICTED: putative pentatricopeptide repeat-cont...    49   2e-11
XP_002307160.2 hypothetical protein POPTR_0005s09280g [Populus t...    47   3e-11
XP_010688663.1 PREDICTED: putative pentatricopeptide repeat-cont...    47   1e-05
KMT02589.1 hypothetical protein BVRB_9g202760 [Beta vulgaris sub...    47   1e-05

>XP_011022023.1 PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g08310, mitochondrial [Populus euphratica]
          Length = 834

 Score = 48.5 bits (114), Expect(3) = 2e-11
 Identities = 30/63 (47%), Positives = 37/63 (58%), Gaps = 10/63 (15%)
 Frame = +1

Query: 10  YNIIAFILPGARQNAHLRFLSTELLNSCSFM----------CIGN*GLLEEAIVLFDQVL 159
           YN +A IL  ARQ A LR LS +++NS   M          C+GN GL+ EA +LFDQV 
Sbjct: 106 YNAMASILSRARQKAPLRALSVDVVNSRCLMSPGALGFLIRCLGNAGLVVEANLLFDQVQ 165

Query: 160 KNG 168
           K G
Sbjct: 166 KTG 168



 Score = 37.4 bits (85), Expect(3) = 2e-11
 Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 30/77 (38%)
 Frame = +3

Query: 306 KWEKVDKAVKLIERIEQLN-----------------QCKLDMLIH-------------IS 395
           KW KVDKA +LIE +E+ N                 + ++D  +H             IS
Sbjct: 255 KWGKVDKACELIETMEEKNVRLNKKTFCSLIYGFVKESRVDKALHLFDKMKKSGFAPDIS 314

Query: 396 LYYIMVGELCLNKEFDK 446
           LY +++G LC+NK+  K
Sbjct: 315 LYDVIIGGLCVNKDVKK 331



 Score = 29.3 bits (64), Expect(3) = 2e-11
 Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 34/84 (40%)
 Frame = +2

Query: 161 KMGFSVPNNQSFTGLLEVN----------------------------------YVHLG*Q 238
           K G  VPN+ S+T LLEV                                   Y ++  +
Sbjct: 166 KTGLCVPNSYSYTCLLEVLSKSSCIDLLEVRLKEMHDHGWGFDKYTLTPVLQVYCNMA-E 224

Query: 239 YDKALDAFSEINRRGLLNSHVIQM 310
           +DKALD F+EI+ RG ++ +V  +
Sbjct: 225 FDKALDVFNEIHDRGWVDEYVFSI 248


>XP_002307160.2 hypothetical protein POPTR_0005s09280g [Populus trichocarpa]
           EEE94156.2 hypothetical protein POPTR_0005s09280g
           [Populus trichocarpa]
          Length = 835

 Score = 47.4 bits (111), Expect(3) = 3e-11
 Identities = 30/63 (47%), Positives = 37/63 (58%), Gaps = 10/63 (15%)
 Frame = +1

Query: 10  YNIIAFILPGARQNAHLRFLSTELLNSCSFM----------CIGN*GLLEEAIVLFDQVL 159
           YN +A IL  ARQ A LR LS +++NS   M          C+GN GL+ EA +LFDQV 
Sbjct: 106 YNAMASILSRARQKAPLRALSMDVVNSRCLMSPGALGFLIRCLGNAGLVVEANLLFDQVQ 165

Query: 160 KNG 168
           K G
Sbjct: 166 KMG 168



 Score = 37.4 bits (85), Expect(3) = 3e-11
 Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 30/77 (38%)
 Frame = +3

Query: 306 KWEKVDKAVKLIERIEQLN-----------------QCKLDMLIH-------------IS 395
           KW KVDKA +LIE +E+ N                 + ++D  +H             IS
Sbjct: 255 KWGKVDKACELIETMEEKNVRLNKKTFCSLIYGFVKESRVDKALHLFDKMKKSGFTPDIS 314

Query: 396 LYYIMVGELCLNKEFDK 446
           LY +++G LC+NK+  K
Sbjct: 315 LYDVIIGGLCVNKDVKK 331



 Score = 30.0 bits (66), Expect(3) = 3e-11
 Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 34/84 (40%)
 Frame = +2

Query: 161 KMGFSVPNNQSFTGLLEVN----------------------------------YVHLG*Q 238
           KMG  VPN+ S+T L EV                                   Y ++  +
Sbjct: 166 KMGLCVPNSYSYTCLFEVLSKSICIDLLEMRLKEMHDHGWGFDKYTLTPVLQVYCNMA-E 224

Query: 239 YDKALDAFSEINRRGLLNSHVIQM 310
           +DKALD F+EI+ RG ++ +V  +
Sbjct: 225 FDKALDVFNEIHDRGWVDEYVFSI 248


>XP_010688663.1 PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g08310, mitochondrial [Beta vulgaris subsp. vulgaris]
          Length = 855

 Score = 46.6 bits (109), Expect(3) = 1e-05
 Identities = 26/63 (41%), Positives = 40/63 (63%), Gaps = 10/63 (15%)
 Frame = +1

Query: 10  YNIIAFILPGARQNAHLRFLSTELLNSCSFM----------CIGN*GLLEEAIVLFDQVL 159
           YN++A IL G R+NA L+ L  ++++S  F+          C+G+ GL+EEA +LFDQV 
Sbjct: 142 YNVMASILSGVRRNAQLKDLVFDMIDSRCFITPGALGFLIRCLGSVGLVEEANMLFDQVR 201

Query: 160 KNG 168
           + G
Sbjct: 202 EMG 204



 Score = 25.4 bits (54), Expect(3) = 1e-05
 Identities = 9/25 (36%), Positives = 19/25 (76%)
 Frame = +2

Query: 236 QYDKALDAFSEINRRGLLNSHVIQM 310
           +++KAL  F+++  RG ++SHV+ +
Sbjct: 260 EFEKALIVFNQMLERGWVDSHVLSI 284



 Score = 23.5 bits (49), Expect(3) = 1e-05
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = +2

Query: 161 KMGFSVPNNQSFTGLLE-VNYVHLG*QYDKALD 256
           +MG  VPN+ S+  LLE ++   L  Q +K LD
Sbjct: 202 EMGLCVPNSYSYNCLLETMSKSSLSDQAEKRLD 234


>KMT02589.1 hypothetical protein BVRB_9g202760 [Beta vulgaris subsp. vulgaris]
          Length = 844

 Score = 46.6 bits (109), Expect(3) = 1e-05
 Identities = 26/63 (41%), Positives = 40/63 (63%), Gaps = 10/63 (15%)
 Frame = +1

Query: 10  YNIIAFILPGARQNAHLRFLSTELLNSCSFM----------CIGN*GLLEEAIVLFDQVL 159
           YN++A IL G R+NA L+ L  ++++S  F+          C+G+ GL+EEA +LFDQV 
Sbjct: 131 YNVMASILSGVRRNAQLKDLVFDMIDSRCFITPGALGFLIRCLGSVGLVEEANMLFDQVR 190

Query: 160 KNG 168
           + G
Sbjct: 191 EMG 193



 Score = 25.4 bits (54), Expect(3) = 1e-05
 Identities = 9/25 (36%), Positives = 19/25 (76%)
 Frame = +2

Query: 236 QYDKALDAFSEINRRGLLNSHVIQM 310
           +++KAL  F+++  RG ++SHV+ +
Sbjct: 249 EFEKALIVFNQMLERGWVDSHVLSI 273



 Score = 23.5 bits (49), Expect(3) = 1e-05
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = +2

Query: 161 KMGFSVPNNQSFTGLLE-VNYVHLG*QYDKALD 256
           +MG  VPN+ S+  LLE ++   L  Q +K LD
Sbjct: 191 EMGLCVPNSYSYNCLLETMSKSSLSDQAEKRLD 223