BLASTX nr result
ID: Panax24_contig00035308
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax24_contig00035308
(477 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GAU50504.1 hypothetical protein TSUD_409790 [Trifolium subterran... 53 3e-08
OMO90064.1 reverse transcriptase [Corchorus capsularis] 62 4e-08
XP_011459751.1 PREDICTED: uncharacterized protein LOC105350077 [... 55 4e-07
XP_011457628.1 PREDICTED: uncharacterized protein LOC101303372 [... 58 6e-07
XP_010692841.1 PREDICTED: uncharacterized protein LOC104905886 [... 57 1e-06
OMP00911.1 reverse transcriptase [Corchorus capsularis] 53 2e-06
KYP73847.1 Putative ribonuclease H protein At1g65750 family [Caj... 54 3e-06
KYP45885.1 Putative ribonuclease H protein At1g65750 family [Caj... 56 3e-06
XP_012089684.1 PREDICTED: uncharacterized protein LOC105648037 [... 56 3e-06
XP_012070547.1 PREDICTED: uncharacterized protein LOC105632718 [... 56 3e-06
XP_013450427.1 reverse transcriptase, putative [Medicago truncat... 51 3e-06
KYP52375.1 Putative ribonuclease H protein At1g65750 family, par... 56 4e-06
GAU41508.1 hypothetical protein TSUD_302460 [Trifolium subterran... 52 4e-06
XP_007212715.1 hypothetical protein PRUPE_ppa018769mg, partial [... 55 4e-06
KYP48420.1 Putative ribonuclease H protein At1g65750 family [Caj... 53 5e-06
KYP74374.1 Putative ribonuclease H protein At1g65750 family [Caj... 55 6e-06
KYP56524.1 Putative ribonuclease H protein At1g65750 family [Caj... 55 7e-06
XP_019150554.1 PREDICTED: uncharacterized protein LOC109147346 [... 52 7e-06
KYP34983.1 Putative ribonuclease H protein At1g65750 family [Caj... 55 7e-06
XP_011457336.1 PREDICTED: uncharacterized protein LOC105349397 [... 55 1e-05
>GAU50504.1 hypothetical protein TSUD_409790 [Trifolium subterraneum]
Length = 902
Score = 53.1 bits (126), Expect(3) = 3e-08
Identities = 21/70 (30%), Positives = 38/70 (54%)
Frame = -3
Query: 388 WISYTSSLVGRTLLIHKITFDLSNYLMQTPWFPSNICDRLENASCRWLWSSDHNKKGVHF 209
W + + +GR L + + +Y MQ W P +ICD ++ + ++W D N KG+H
Sbjct: 507 WKNKLLNKLGRLALASSVISSIPSYYMQISWLPQSICDSIDQTTRNFIW-RDSNNKGIHL 565
Query: 208 MSWTQLQKGK 179
+SW ++ + K
Sbjct: 566 VSWKKIARPK 575
Score = 26.2 bits (56), Expect(3) = 3e-08
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -1
Query: 135 SLLS*FVGKVINTENSLWVENLNTKY 58
SLL V ++ + N LWV+ L++KY
Sbjct: 591 SLLGKLVWDMVQSSNKLWVDLLSSKY 616
Score = 25.0 bits (53), Expect(3) = 3e-08
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -2
Query: 194 VTKRKSQGGHSIRTCRDHNVACCPNLLGK 108
+ + K GG SIRT R N+ +LLGK
Sbjct: 571 IARPKQHGGLSIRTARGQNI----SLLGK 595
>OMO90064.1 reverse transcriptase [Corchorus capsularis]
Length = 1335
Score = 61.6 bits (148), Expect = 4e-08
Identities = 32/93 (34%), Positives = 52/93 (55%)
Frame = -3
Query: 370 SLVGRTLLIHKITFDLSNYLMQTPWFPSNICDRLENASCRWLWSSDHNKKGVHFMSWTQL 191
SL GRT+LI + Y MQT P ++CD ++ S +LW S K+ +H ++W Q+
Sbjct: 934 SLAGRTVLIKSAASPVPIYTMQTARLPLSVCDEIDKRSRGFLWGSSAEKRKIHLVNWEQV 993
Query: 190 QKGKVREVIPLELAEITT*PAVLICWESDQYRE 92
K K +E + EL E++T L W+ D +++
Sbjct: 994 CKPKNQEGLDSELQEMST-WLYLQRWDGDSWKK 1025
>XP_011459751.1 PREDICTED: uncharacterized protein LOC105350077 [Fragaria vesca
subsp. vesca]
Length = 704
Score = 55.1 bits (131), Expect(2) = 4e-07
Identities = 24/70 (34%), Positives = 38/70 (54%)
Frame = -3
Query: 388 WISYTSSLVGRTLLIHKITFDLSNYLMQTPWFPSNICDRLENASCRWLWSSDHNKKGVHF 209
W S S GR L+ +T + Y MQT FP ++CD+L+ + ++W NKK VH
Sbjct: 362 WKSKVLSFAGRLTLVQSVTSAIPMYAMQTTKFPFSLCDKLDKLNRDFIWGDVENKKRVHL 421
Query: 208 MSWTQLQKGK 179
++W + + K
Sbjct: 422 VNWDTICQPK 431
Score = 26.2 bits (56), Expect(2) = 4e-07
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -2
Query: 473 LNMLLVHSNLPKQIYAFVFDKVQHTL 396
L+M L+H + K YA FDKVQ L
Sbjct: 334 LDMPLIHDRVNKCTYAGSFDKVQKRL 359
>XP_011457628.1 PREDICTED: uncharacterized protein LOC101303372 [Fragaria vesca
subsp. vesca]
Length = 718
Score = 58.2 bits (139), Expect = 6e-07
Identities = 24/72 (33%), Positives = 40/72 (55%)
Frame = -3
Query: 388 WISYTSSLVGRTLLIHKITFDLSNYLMQTPWFPSNICDRLENASCRWLWSSDHNKKGVHF 209
W S T S+ GR L+ +T + Y MQT P ++C+ ++ A+ +LW + KK +H
Sbjct: 330 WSSKTLSMAGRLTLVQSVTASIPIYAMQTAKLPLSLCESIDKANINFLWGDSNEKKKIHL 389
Query: 208 MSWTQLQKGKVR 173
++W + K K R
Sbjct: 390 VNWESVCKPKHR 401
>XP_010692841.1 PREDICTED: uncharacterized protein LOC104905886 [Beta vulgaris
subsp. vulgaris]
Length = 978
Score = 57.0 bits (136), Expect(2) = 1e-06
Identities = 24/68 (35%), Positives = 36/68 (52%)
Frame = -3
Query: 388 WISYTSSLVGRTLLIHKITFDLSNYLMQTPWFPSNICDRLENASCRWLWSSDHNKKGVHF 209
W + SL GR L ++NY MQ+ P ++CD ++ CR+LW K+ +H
Sbjct: 700 WKTKYLSLAGRITLAKSTLTTMANYSMQSAKLPRSVCDDVDKRVCRFLWGGTEEKRAIHL 759
Query: 208 MSWTQLQK 185
+SW LQK
Sbjct: 760 ISWETLQK 767
Score = 22.3 bits (46), Expect(2) = 1e-06
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -2
Query: 212 LYELDTVTKRKSQGGHSIRTCRDHNVA 132
L +T+ K + QGG +I + R NVA
Sbjct: 759 LISWETLQKPQGQGGLAIPSSRQANVA 785
>OMP00911.1 reverse transcriptase [Corchorus capsularis]
Length = 1482
Score = 53.1 bits (126), Expect(2) = 2e-06
Identities = 25/70 (35%), Positives = 37/70 (52%)
Frame = -3
Query: 388 WISYTSSLVGRTLLIHKITFDLSNYLMQTPWFPSNICDRLENASCRWLWSSDHNKKGVHF 209
W S SL GR LI +T + Y M T P N+ L++ + R+LW + K+GVH
Sbjct: 1057 WKSRFLSLAGRATLISSVTTSIPAYNMMTMALPKNVTRSLDSLNNRFLWGGNEQKRGVHL 1116
Query: 208 MSWTQLQKGK 179
+SW + + K
Sbjct: 1117 VSWEDVCRPK 1126
Score = 25.4 bits (54), Expect(2) = 2e-06
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -1
Query: 135 SLLS*FVGKVINTENSLWVENLNTKYPIQD 46
+LL + I E+SLWV+ + KY ++D
Sbjct: 1142 ALLQKTAWRFITEEDSLWVKFIKAKYRVRD 1171
>KYP73847.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
Length = 138
Score = 53.9 bits (128), Expect = 3e-06
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 1/93 (1%)
Frame = -3
Query: 388 WISYTSSLVGRTLLIHKITFDLSNYLMQTPWFPSNICDRLENASCRWLWSSDHNKKGVHF 209
W + T S GR L + L Y MQT +FP CD L+ A +LW N + VH
Sbjct: 12 WKANTLSFAGRLTLSKSVLATLPTYTMQTVYFPKQCCDELDRACRSFLWGDSSNHRCVHA 71
Query: 208 MSWTQLQKGK-VREVIPLELAEITT*PAVLICW 113
++W + K K R + E ++ T + CW
Sbjct: 72 VAWETICKPKDSRGLGVKEARKVNTCYMMKNCW 104
>KYP45885.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
Length = 1192
Score = 56.2 bits (134), Expect = 3e-06
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 10/99 (10%)
Frame = -3
Query: 445 YLNRSMPLSLIKFSTHSWV----------WISYTSSLVGRTLLIHKITFDLSNYLMQTPW 296
YL + S + +THS + W + + S GR L + L +Y MQT W
Sbjct: 839 YLGIPLHHSRVNRATHSGIIEKVTQRLNNWKAKSLSFAGRLTLTKSVLTALPSYTMQTVW 898
Query: 295 FPSNICDRLENASCRWLWSSDHNKKGVHFMSWTQLQKGK 179
P NICD ++ + ++LW + K VH +SW+ + + K
Sbjct: 899 LPRNICDDIDKKNRQFLWGDTSHNKKVHTVSWSVICQPK 937
>XP_012089684.1 PREDICTED: uncharacterized protein LOC105648037 [Jatropha curcas]
Length = 1259
Score = 56.2 bits (134), Expect = 3e-06
Identities = 23/70 (32%), Positives = 39/70 (55%)
Frame = -3
Query: 388 WISYTSSLVGRTLLIHKITFDLSNYLMQTPWFPSNICDRLENASCRWLWSSDHNKKGVHF 209
W + S G+ +L+ + + NY+M FP ++C+ LE CR+ W + N G+H+
Sbjct: 690 WKAKKLSKSGKEILLKTVLQAIPNYVMMLFLFPKSLCEALEKIMCRFWWGTTENNHGIHW 749
Query: 208 MSWTQLQKGK 179
MSW +L + K
Sbjct: 750 MSWERLCRDK 759
>XP_012070547.1 PREDICTED: uncharacterized protein LOC105632718 [Jatropha curcas]
Length = 1382
Score = 56.2 bits (134), Expect = 3e-06
Identities = 23/70 (32%), Positives = 39/70 (55%)
Frame = -3
Query: 388 WISYTSSLVGRTLLIHKITFDLSNYLMQTPWFPSNICDRLENASCRWLWSSDHNKKGVHF 209
W + S G+ +L+ + + NY+M FP ++C+ LE CR+ W + N G+H+
Sbjct: 813 WKAKKLSKSGKEILLKTVLQAIPNYVMMLFLFPKSLCEALEKIMCRFWWGTTENNHGIHW 872
Query: 208 MSWTQLQKGK 179
MSW +L + K
Sbjct: 873 MSWERLCRDK 882
>XP_013450427.1 reverse transcriptase, putative [Medicago truncatula] KEH24455.1
reverse transcriptase, putative [Medicago truncatula]
Length = 336
Score = 51.2 bits (121), Expect(2) = 3e-06
Identities = 21/70 (30%), Positives = 36/70 (51%)
Frame = -3
Query: 388 WISYTSSLVGRTLLIHKITFDLSNYLMQTPWFPSNICDRLENASCRWLWSSDHNKKGVHF 209
W + + GR L + + Y MQ W P NICD +++ + ++W N KG+H
Sbjct: 113 WNNKLLNRTGRVTLATSVLSSIPTYYMQINWLPQNICDSIDHTTRNFVWKGTDN-KGIHL 171
Query: 208 MSWTQLQKGK 179
++W ++ K K
Sbjct: 172 VNWQKVTKPK 181
Score = 26.9 bits (58), Expect(2) = 3e-06
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = -2
Query: 194 VTKRKSQGGHSIRTCRDHNVACCPNLLGK*SIQRIPCGLRI*IPNTPSKTFDLHS 30
VTK K GG I++ RD N + +GK SIQ+I PNT T++ S
Sbjct: 177 VTKPKHMGGLGIQSARDANTS-----VGKHSIQQIRFW-----PNTLHATYNSSS 221
>KYP52375.1 Putative ribonuclease H protein At1g65750 family, partial [Cajanus
cajan]
Length = 594
Score = 55.8 bits (133), Expect = 4e-06
Identities = 25/71 (35%), Positives = 37/71 (52%)
Frame = -3
Query: 388 WISYTSSLVGRTLLIHKITFDLSNYLMQTPWFPSNICDRLENASCRWLWSSDHNKKGVHF 209
W + T S GR L + L +YLMQ+ + P +CD L+ R+LW NK VH
Sbjct: 258 WKAKTLSFAGRVTLTQSVLSALPSYLMQSVYLPRQLCDELDKQYRRFLWDDKENKHRVHA 317
Query: 208 MSWTQLQKGKV 176
+SW + K ++
Sbjct: 318 VSWEVISKPRL 328
>GAU41508.1 hypothetical protein TSUD_302460 [Trifolium subterraneum]
Length = 1075
Score = 52.4 bits (124), Expect(2) = 4e-06
Identities = 21/70 (30%), Positives = 36/70 (51%)
Frame = -3
Query: 388 WISYTSSLVGRTLLIHKITFDLSNYLMQTPWFPSNICDRLENASCRWLWSSDHNKKGVHF 209
W + + GR L + + Y MQ W P +ICD ++ + ++LW D N KG+H
Sbjct: 580 WKNRLLNKPGRLALASSVLSSIPTYYMQIAWLPQSICDSIDQTTRKFLW-KDSNNKGIHL 638
Query: 208 MSWTQLQKGK 179
+ W ++ + K
Sbjct: 639 VGWNKIARPK 648
Score = 25.4 bits (54), Expect(2) = 4e-06
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -1
Query: 150 QRSQRSLLS*FVGKVINTENSLWVENLNTKY 58
+ + SLL V ++ + N LWV L+ KY
Sbjct: 659 REANTSLLGKLVWDMVQSSNKLWVNLLSNKY 689
>XP_007212715.1 hypothetical protein PRUPE_ppa018769mg, partial [Prunus persica]
Length = 387
Score = 55.5 bits (132), Expect = 4e-06
Identities = 25/82 (30%), Positives = 42/82 (51%)
Frame = -3
Query: 391 VWISYTSSLVGRTLLIHKITFDLSNYLMQTPWFPSNICDRLENASCRWLWSSDHNKKGVH 212
+W S SL GR LI +T + Y MQT P ++C+ L+ +C + W N +H
Sbjct: 153 LWKSKHLSLAGRATLIQSVTSSIPVYTMQTAKLPVSVCNALDRINCNFFWGGTENNHKIH 212
Query: 211 FMSWTQLQKGKVREVIPLELAE 146
W ++ ++REV+ E+ +
Sbjct: 213 LYGWWDIE--RLREVLFEEMVQ 232
>KYP48420.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
Length = 114
Score = 52.8 bits (125), Expect = 5e-06
Identities = 23/70 (32%), Positives = 38/70 (54%)
Frame = -3
Query: 388 WISYTSSLVGRTLLIHKITFDLSNYLMQTPWFPSNICDRLENASCRWLWSSDHNKKGVHF 209
W S + S VGR L + L +Y MQ +FP +CD ++ +S ++W D + + +H
Sbjct: 11 WKSKSLSFVGRLTLSKSVLAALPSYTMQIVFFPKQLCDDIDRSSRSFIWGEDGHNRRIHA 70
Query: 208 MSWTQLQKGK 179
++W L K K
Sbjct: 71 LAWETLCKPK 80
>KYP74374.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
Length = 1421
Score = 54.7 bits (130), Expect(2) = 6e-06
Identities = 24/71 (33%), Positives = 37/71 (52%)
Frame = -3
Query: 388 WISYTSSLVGRTLLIHKITFDLSNYLMQTPWFPSNICDRLENASCRWLWSSDHNKKGVHF 209
W + T S GR L + L +YLMQ+ + P +CD L+ R+LW NK +H
Sbjct: 981 WKAKTLSFAGRVTLTQSVLSALPSYLMQSVYLPRQVCDELDKHYRRFLWDDKENKHRLHA 1040
Query: 208 MSWTQLQKGKV 176
+SW + K ++
Sbjct: 1041 VSWEVISKPRL 1051
Score = 22.3 bits (46), Expect(2) = 6e-06
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 4/34 (11%)
Frame = -1
Query: 147 RSQRSLLS*FVGK----VINTENSLWVENLNTKY 58
RS R + S F+ K I + LWV+ LN KY
Sbjct: 1058 RSTRHMNSLFMMKNCWEFITQPDKLWVKVLNAKY 1091
>KYP56524.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
Length = 1146
Score = 54.7 bits (130), Expect(2) = 7e-06
Identities = 24/71 (33%), Positives = 37/71 (52%)
Frame = -3
Query: 388 WISYTSSLVGRTLLIHKITFDLSNYLMQTPWFPSNICDRLENASCRWLWSSDHNKKGVHF 209
W + T S GR L + L +YLMQ+ + P +CD L+ R+LW NK +H
Sbjct: 557 WKAKTLSFAGRVTLTQSVLSALPSYLMQSVYLPRQVCDELDKHYRRFLWDDKENKHRLHA 616
Query: 208 MSWTQLQKGKV 176
+SW + K ++
Sbjct: 617 VSWEVISKPRL 627
Score = 22.3 bits (46), Expect(2) = 7e-06
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 4/34 (11%)
Frame = -1
Query: 147 RSQRSLLS*FVGK----VINTENSLWVENLNTKY 58
RS R + S F+ K I + LWV+ LN KY
Sbjct: 634 RSTRHMNSLFMMKNCWEFITQPDKLWVKVLNAKY 667
>XP_019150554.1 PREDICTED: uncharacterized protein LOC109147346 [Ipomoea nil]
Length = 907
Score = 52.4 bits (124), Expect(2) = 7e-06
Identities = 26/72 (36%), Positives = 37/72 (51%)
Frame = -3
Query: 388 WISYTSSLVGRTLLIHKITFDLSNYLMQTPWFPSNICDRLENASCRWLWSSDHNKKGVHF 209
W S T SL GR +L + +S Y MQT P+ I D +E +LW S K +H
Sbjct: 542 WRSRTLSLAGRQVLAQSVLSTISYYSMQTMPTPAGIIDSIEKQIRGFLWGSSEGSKKIHL 601
Query: 208 MSWTQLQKGKVR 173
+SW + + K+R
Sbjct: 602 VSWDVVTQNKLR 613
Score = 24.6 bits (52), Expect(2) = 7e-06
Identities = 10/32 (31%), Positives = 21/32 (65%)
Frame = -1
Query: 153 LQRSQRSLLS*FVGKVINTENSLWVENLNTKY 58
L+ ++ L+ ++++ ++SLWV+ L TKY
Sbjct: 621 LKEMNQAFLAKLGWRMLHEKDSLWVQLLRTKY 652
>KYP34983.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
Length = 435
Score = 54.7 bits (130), Expect(2) = 7e-06
Identities = 24/71 (33%), Positives = 37/71 (52%)
Frame = -3
Query: 388 WISYTSSLVGRTLLIHKITFDLSNYLMQTPWFPSNICDRLENASCRWLWSSDHNKKGVHF 209
W + T S GR L + L +YLMQ+ + P +CD L+ R+LW NK +H
Sbjct: 257 WKAKTLSFAGRVTLTQSVLSALPSYLMQSVYLPRQVCDELDKHYRRFLWDDKENKHRLHA 316
Query: 208 MSWTQLQKGKV 176
+SW + K ++
Sbjct: 317 VSWEVISKPRL 327
Score = 22.3 bits (46), Expect(2) = 7e-06
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 4/34 (11%)
Frame = -1
Query: 147 RSQRSLLS*FVGK----VINTENSLWVENLNTKY 58
RS R + S F+ K I + LWV+ LN KY
Sbjct: 334 RSTRHMNSLFMMKNCWEFITQPDKLWVKVLNAKY 367
>XP_011457336.1 PREDICTED: uncharacterized protein LOC105349397 [Fragaria vesca
subsp. vesca]
Length = 806
Score = 54.7 bits (130), Expect = 1e-05
Identities = 25/70 (35%), Positives = 37/70 (52%)
Frame = -3
Query: 388 WISYTSSLVGRTLLIHKITFDLSNYLMQTPWFPSNICDRLENASCRWLWSSDHNKKGVHF 209
W S+T S+ GR LI +T L Y MQ+ P +IC+ L+ + +LW KK +H
Sbjct: 624 WKSHTLSMAGRHTLIQSVTAGLPVYTMQSVKLPMSICNTLDRLNMNFLWGHTEEKKKIHL 683
Query: 208 MSWTQLQKGK 179
+ W + K K
Sbjct: 684 VKWDTVCKPK 693