BLASTX nr result
ID: Panax24_contig00035299
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax24_contig00035299
(560 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAB01130.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large... 92 2e-18
YP_086974.1 ribulose-1,5-bisphosphate carboxylase/oxygenase larg... 92 2e-18
YP_009155436.1 ribulose-1,5-bisphosphate carboxylase/oxygenase l... 92 3e-18
ABV82800.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large... 83 4e-18
ABV82803.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large... 83 5e-18
YP_009191948.1 ribulose-1,5-bisphosphate carboxylase/oxygenase l... 91 6e-18
YP_009191861.1 ribulose-1,5-bisphosphate carboxylase/oxygenase l... 91 6e-18
AEK70802.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large... 83 1e-17
AEK70794.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large... 83 1e-17
ABV82801.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large... 82 2e-17
CAG26950.1 ribulose 1,5 biphosphate carboxylase/oxygenase, parti... 86 2e-17
ABV82802.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large... 82 2e-17
BAE46443.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large... 82 2e-17
CAG26962.1 ribulose 1,5 biphosphate carboxylase/oxygenase, parti... 86 3e-17
AGA12921.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large... 84 3e-17
AAV65402.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large... 89 3e-17
XP_006386966.1 hypothetical protein POPTR_2555s00200g, partial [... 82 3e-17
AAM21497.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large... 84 4e-17
YP_009121181.1 ribulose 1,5-bisphosphate carboxylase/oxygenase l... 88 4e-17
BAK82061.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large... 80 5e-17
>AAB01130.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit,
partial (chloroplast) [Panax quinquefolius]
Length = 478
Score = 91.7 bits (226), Expect = 2e-18
Identities = 44/44 (100%), Positives = 44/44 (100%)
Frame = +2
Query: 2 RDLAREGNEIIREAAKWSPELAAACEVWKEIKFEFEAVDILDVV 133
RDLAREGNEIIREAAKWSPELAAACEVWKEIKFEFEAVDILDVV
Sbjct: 435 RDLAREGNEIIREAAKWSPELAAACEVWKEIKFEFEAVDILDVV 478
>YP_086974.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit
[Panax ginseng] Q68RZ8.1 RecName: Full=Ribulose
bisphosphate carboxylase large chain; Short=RuBisCO
large subunit; Flags: Precursor AAT98517.1
ribulose-1,5-bisphosphate carboxylase/oxygenase large
subunit (chloroplast) [Panax ginseng] AGM15002.1
ribulose-1,5-bisphosphate carboxylase/oxygenase large
subunit (chloroplast) [Panax ginseng] AGM15088.1
ribulose-1,5-bisphosphate carboxylase/oxygenase large
subunit (chloroplast) [Panax ginseng] AGM15174.1
ribulose-1,5-bisphosphate carboxylase/oxygenase large
subunit (chloroplast) [Panax ginseng] AGW31934.1
ribulose-1,5-bisphosphate carboxylase/oxygenase large
subunit (chloroplast) [Panax ginseng] AKZ29754.1
ribulose-1,5-bisphosphate carboxylase/oxygenase large
subunit (chloroplast) [Panax quinquefolius]
Length = 478
Score = 91.7 bits (226), Expect = 2e-18
Identities = 44/44 (100%), Positives = 44/44 (100%)
Frame = +2
Query: 2 RDLAREGNEIIREAAKWSPELAAACEVWKEIKFEFEAVDILDVV 133
RDLAREGNEIIREAAKWSPELAAACEVWKEIKFEFEAVDILDVV
Sbjct: 435 RDLAREGNEIIREAAKWSPELAAACEVWKEIKFEFEAVDILDVV 478
>YP_009155436.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit
(chloroplast) [Panax quinquefolius] AIX97897.1
ribulose-1,5-bisphosphate carboxylase/oxygenase large
subunit (chloroplast) [Panax ginseng] AIX97984.1
ribulose-1,5-bisphosphate carboxylase/oxygenase large
subunit (chloroplast) [Panax ginseng] AIX98067.1
ribulose-1,5-bisphosphate carboxylase/oxygenase large
subunit (chloroplast) [Panax ginseng] AIX98152.1
ribulose-1,5-bisphosphate carboxylase/oxygenase large
subunit (chloroplast) [Panax ginseng] AIX98237.1
ribulose-1,5-bisphosphate carboxylase/oxygenase large
subunit (chloroplast) [Panax ginseng] AIX98322.1
ribulose-1,5-bisphosphate carboxylase/oxygenase large
subunit (chloroplast) [Panax ginseng] AIX98407.1
ribulose-1,5-bisphosphate carboxylase/oxygenase large
subunit (chloroplast) [Panax ginseng] AIX98492.1
ribulose-1,5-bisphosphate carboxylase/oxygenase large
subunit (chloroplast) [Panax ginseng] AIX98577.1
ribulose-1,5-bisphosphate carboxylase/oxygenase large
subunit (chloroplast) [Panax ginseng] AJC99496.1
ribulose-1,5-bisphosphate carboxylase/oxygenase large
subunit (chloroplast) [Panax quinquefolius] AJC99581.1
ribulose-1,5-bisphosphate carboxylase/oxygenase large
subunit (chloroplast) [Panax ginseng] AJC99666.1
ribulose-1,5-bisphosphate carboxylase/oxygenase large
subunit (chloroplast) [Panax ginseng]
Length = 485
Score = 91.7 bits (226), Expect = 3e-18
Identities = 44/44 (100%), Positives = 44/44 (100%)
Frame = +2
Query: 2 RDLAREGNEIIREAAKWSPELAAACEVWKEIKFEFEAVDILDVV 133
RDLAREGNEIIREAAKWSPELAAACEVWKEIKFEFEAVDILDVV
Sbjct: 442 RDLAREGNEIIREAAKWSPELAAACEVWKEIKFEFEAVDILDVV 485
>ABV82800.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit,
partial (chloroplast) [Osmunda banksiifolia]
Length = 54
Score = 83.2 bits (204), Expect = 4e-18
Identities = 38/41 (92%), Positives = 40/41 (97%)
Frame = +2
Query: 2 RDLAREGNEIIREAAKWSPELAAACEVWKEIKFEFEAVDIL 124
RDLAREGNEIIREAAKWSPELAAACEVWKEIKFEF+ VD+L
Sbjct: 14 RDLAREGNEIIREAAKWSPELAAACEVWKEIKFEFDTVDVL 54
>ABV82803.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit,
partial (chloroplast) [Osmunda javanica]
Length = 64
Score = 83.2 bits (204), Expect = 5e-18
Identities = 38/41 (92%), Positives = 40/41 (97%)
Frame = +2
Query: 2 RDLAREGNEIIREAAKWSPELAAACEVWKEIKFEFEAVDIL 124
RDLAREGNEIIREAAKWSPELAAACEVWKEIKFEF+ VD+L
Sbjct: 24 RDLAREGNEIIREAAKWSPELAAACEVWKEIKFEFDTVDVL 64
>YP_009191948.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit
(chloroplast) [Panax vietnamensis] AKB99254.1
ribulose-1,5-bisphosphate carboxylase/oxygenase large
subunit (chloroplast) [Panax vietnamensis] AKB99341.1
ribulose-1,5-bisphosphate carboxylase/oxygenase large
subunit (chloroplast) [Panax vietnamensis] AMR97457.1
ribulose-1,5-bisphosphate carboxylase/oxygenase large
subunit (chloroplast) [Panax vietnamensis]
Length = 478
Score = 90.5 bits (223), Expect = 6e-18
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +2
Query: 2 RDLAREGNEIIREAAKWSPELAAACEVWKEIKFEFEAVDILDVV 133
RDLAREGNEIIREAAKWSPELAAACEVWKEIKFEFEAVDILDV+
Sbjct: 435 RDLAREGNEIIREAAKWSPELAAACEVWKEIKFEFEAVDILDVL 478
>YP_009191861.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit
(chloroplast) [Panax japonicus] AKB99167.1
ribulose-1,5-bisphosphate carboxylase/oxygenase large
subunit (chloroplast) [Panax japonicus]
Length = 478
Score = 90.5 bits (223), Expect = 6e-18
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +2
Query: 2 RDLAREGNEIIREAAKWSPELAAACEVWKEIKFEFEAVDILDVV 133
RDLAREGNEIIREAAKWSPELAAACEVWKEIKFEFEAVDILDV+
Sbjct: 435 RDLAREGNEIIREAAKWSPELAAACEVWKEIKFEFEAVDILDVL 478
>AEK70802.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit,
partial (chloroplast) [Astrocaryum scopatum] AEK70804.1
ribulose-1,5-bisphosphate carboxylase/oxygenase large
subunit, partial (chloroplast) [Astrocaryum murumuru]
Length = 81
Score = 82.8 bits (203), Expect = 1e-17
Identities = 39/42 (92%), Positives = 40/42 (95%)
Frame = +2
Query: 2 RDLAREGNEIIREAAKWSPELAAACEVWKEIKFEFEAVDILD 127
RDLAREGNEIIREA+KWSPELAAACEVWKEIKFEFE VD LD
Sbjct: 39 RDLAREGNEIIREASKWSPELAAACEVWKEIKFEFEPVDKLD 80
>AEK70794.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit,
partial (chloroplast) [Ceroxylon echinulatum] AEK70796.1
ribulose-1,5-bisphosphate carboxylase/oxygenase large
subunit, partial (chloroplast) [Ceroxylon echinulatum]
Length = 81
Score = 82.8 bits (203), Expect = 1e-17
Identities = 39/42 (92%), Positives = 40/42 (95%)
Frame = +2
Query: 2 RDLAREGNEIIREAAKWSPELAAACEVWKEIKFEFEAVDILD 127
RDLAREGNEIIREA+KWSPELAAACEVWKEIKFEFE VD LD
Sbjct: 39 RDLAREGNEIIREASKWSPELAAACEVWKEIKFEFEPVDKLD 80
>ABV82801.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit,
partial (chloroplast) [Osmunda claytoniana]
Length = 52
Score = 81.6 bits (200), Expect = 2e-17
Identities = 37/41 (90%), Positives = 39/41 (95%)
Frame = +2
Query: 2 RDLAREGNEIIREAAKWSPELAAACEVWKEIKFEFEAVDIL 124
RDLAREGNEIIREA KWSPELAAACEVWKEIKFEF+ VD+L
Sbjct: 12 RDLAREGNEIIREACKWSPELAAACEVWKEIKFEFDTVDVL 52
>CAG26950.1 ribulose 1,5 biphosphate carboxylase/oxygenase, partial
(chloroplast) [Lachnaea macrantha]
Length = 216
Score = 85.9 bits (211), Expect = 2e-17
Identities = 40/42 (95%), Positives = 41/42 (97%)
Frame = +2
Query: 2 RDLAREGNEIIREAAKWSPELAAACEVWKEIKFEFEAVDILD 127
RDLAREGNEIIREA KWSPELAAACEVWKEIKFEFEA+DILD
Sbjct: 175 RDLAREGNEIIREACKWSPELAAACEVWKEIKFEFEAMDILD 216
>ABV82802.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit,
partial (chloroplast) [Osmunda japonica]
Length = 64
Score = 81.6 bits (200), Expect = 2e-17
Identities = 37/41 (90%), Positives = 39/41 (95%)
Frame = +2
Query: 2 RDLAREGNEIIREAAKWSPELAAACEVWKEIKFEFEAVDIL 124
RDLAREGNEIIREA KWSPELAAACEVWKEIKFEF+ VD+L
Sbjct: 24 RDLAREGNEIIREACKWSPELAAACEVWKEIKFEFDTVDVL 64
>BAE46443.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit,
partial (chloroplast) [Artocarpus altilis] BAE46445.1
ribulose-1,5-bisphosphate carboxylase/oxygenase large
subunit, partial (chloroplast) [Artocarpus
heterophyllus]
Length = 83
Score = 82.0 bits (201), Expect = 2e-17
Identities = 38/41 (92%), Positives = 40/41 (97%)
Frame = +2
Query: 2 RDLAREGNEIIREAAKWSPELAAACEVWKEIKFEFEAVDIL 124
RDLAREGNEIIREA+KWSPELAAACEVWKEIKFEFEA+D L
Sbjct: 43 RDLAREGNEIIREASKWSPELAAACEVWKEIKFEFEAMDTL 83
>CAG26962.1 ribulose 1,5 biphosphate carboxylase/oxygenase, partial
(chloroplast) [Lachnaea pomposa]
Length = 231
Score = 85.9 bits (211), Expect = 3e-17
Identities = 40/42 (95%), Positives = 41/42 (97%)
Frame = +2
Query: 2 RDLAREGNEIIREAAKWSPELAAACEVWKEIKFEFEAVDILD 127
RDLAREGNEIIREA KWSPELAAACEVWKEIKFEFEA+DILD
Sbjct: 190 RDLAREGNEIIREACKWSPELAAACEVWKEIKFEFEAMDILD 231
>AGA12921.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit,
partial (chloroplast) [Meiogyne baillonii]
Length = 169
Score = 84.3 bits (207), Expect = 3e-17
Identities = 39/42 (92%), Positives = 41/42 (97%)
Frame = +2
Query: 2 RDLAREGNEIIREAAKWSPELAAACEVWKEIKFEFEAVDILD 127
RDLAR+GNEIIREA+KWSPELAAACEVWKEIKFEFEAVD LD
Sbjct: 128 RDLARQGNEIIREASKWSPELAAACEVWKEIKFEFEAVDTLD 169
>AAV65402.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit,
partial (chloroplast) [Andrachne telephioides]
Length = 469
Score = 88.6 bits (218), Expect = 3e-17
Identities = 42/44 (95%), Positives = 43/44 (97%)
Frame = +2
Query: 2 RDLAREGNEIIREAAKWSPELAAACEVWKEIKFEFEAVDILDVV 133
RDLAREGNEIIREA+KWSPELAAACEVWKEIKFEFEAVD LDVV
Sbjct: 425 RDLAREGNEIIREASKWSPELAAACEVWKEIKFEFEAVDTLDVV 468
>XP_006386966.1 hypothetical protein POPTR_2555s00200g, partial [Populus
trichocarpa] ERP45880.1 hypothetical protein
POPTR_2555s00200g, partial [Populus trichocarpa]
Length = 83
Score = 81.6 bits (200), Expect = 3e-17
Identities = 37/41 (90%), Positives = 41/41 (100%)
Frame = +2
Query: 2 RDLAREGNEIIREAAKWSPELAAACEVWKEIKFEFEAVDIL 124
RDLAREGNEIIREA+KWSPELAAACEVWKEIKFEF+A+D+L
Sbjct: 43 RDLAREGNEIIREASKWSPELAAACEVWKEIKFEFQAMDML 83
>AAM21497.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit,
partial (chloroplast) [Pinus elliottii]
Length = 155
Score = 83.6 bits (205), Expect = 4e-17
Identities = 36/41 (87%), Positives = 41/41 (100%)
Frame = +2
Query: 2 RDLAREGNEIIREAAKWSPELAAACEVWKEIKFEFEAVDIL 124
RDLAREGNE+IREAAKWSPELAAACE+WKEIKFEF+A+D+L
Sbjct: 115 RDLAREGNEVIREAAKWSPELAAACEIWKEIKFEFDAIDVL 155
>YP_009121181.1 ribulose 1,5-bisphosphate carboxylase/oxygenase large subunit
(chloroplast) [Panax notoginseng] AIA24335.1 ribulose
1,5-bisphosphate carboxylase/oxygenase large subunit
(chloroplast) [Panax notoginseng] AKB99080.1
ribulose-1,5-bisphosphate carboxylase/oxygenase large
subunit (chloroplast) [Panax notoginseng] AKG26608.1
ribulose-1,5-bisphosphate carboxylase/oxygenase large
subunit (chloroplast) [Panax notoginseng] AKU70783.1
ribulose-1,5-bisphosphate carboxylase/oxygenase large
subunit (chloroplast) [Panax notoginseng]
Length = 478
Score = 88.2 bits (217), Expect = 4e-17
Identities = 42/44 (95%), Positives = 43/44 (97%)
Frame = +2
Query: 2 RDLAREGNEIIREAAKWSPELAAACEVWKEIKFEFEAVDILDVV 133
RDLA EGNEIIREAAKWSPELAAACEVWKEIKFEFEAVDILDV+
Sbjct: 435 RDLASEGNEIIREAAKWSPELAAACEVWKEIKFEFEAVDILDVL 478
>BAK82061.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit,
partial (chloroplast) [Pyrus ussuriensis] BAK82063.1
ribulose-1,5-bisphosphate carboxylase/oxygenase large
subunit, partial (chloroplast) [Pyrus ussuriensis]
BAK82065.1 ribulose-1,5-bisphosphate
carboxylase/oxygenase large subunit, partial
(chloroplast) [Pyrus x bretschneideri] BAK82067.1
ribulose-1,5-bisphosphate carboxylase/oxygenase large
subunit, partial (chloroplast) [Pyrus ussuriensis]
BAK82069.1 ribulose-1,5-bisphosphate
carboxylase/oxygenase large subunit, partial
(chloroplast) [Pyrus regelii] BAK82071.1
ribulose-1,5-bisphosphate carboxylase/oxygenase large
subunit, partial (chloroplast) [Pyrus x bretschneideri]
BAK82073.1 ribulose-1,5-bisphosphate
carboxylase/oxygenase large subunit, partial
(chloroplast) [Pyrus cordata] BAK82075.1
ribulose-1,5-bisphosphate carboxylase/oxygenase large
subunit, partial (chloroplast) [Pyrus cordata]
BAK82077.1 ribulose-1,5-bisphosphate
carboxylase/oxygenase large subunit, partial
(chloroplast) [Pyrus communis] BAK82079.1
ribulose-1,5-bisphosphate carboxylase/oxygenase large
subunit, partial (chloroplast) [Pyrus communis]
BAK82081.1 ribulose-1,5-bisphosphate
carboxylase/oxygenase large subunit, partial
(chloroplast) [Pyrus communis] BAK82083.1
ribulose-1,5-bisphosphate carboxylase/oxygenase large
subunit, partial (chloroplast) [Pyrus communis]
BAK82085.1 ribulose-1,5-bisphosphate
carboxylase/oxygenase large subunit, partial
(chloroplast) [Pyrus communis] BAK82087.1
ribulose-1,5-bisphosphate carboxylase/oxygenase large
subunit, partial (chloroplast) [Pyrus communis]
BAK82089.1 ribulose-1,5-bisphosphate
carboxylase/oxygenase large subunit, partial
(chloroplast) [Pyrus hondoensis] BAK82091.1
ribulose-1,5-bisphosphate carboxylase/oxygenase large
subunit, partial (chloroplast) [Pyrus hondoensis]
BAK82093.1 ribulose-1,5-bisphosphate
carboxylase/oxygenase large subunit, partial
(chloroplast) [Pyrus hondoensis] BAK82095.1
ribulose-1,5-bisphosphate carboxylase/oxygenase large
subunit, partial (chloroplast) [Pyrus communis subsp.
caucasica] BAK82097.1 ribulose-1,5-bisphosphate
carboxylase/oxygenase large subunit, partial
(chloroplast) [Pyrus pyrifolia] BAK82099.1
ribulose-1,5-bisphosphate carboxylase/oxygenase large
subunit, partial (chloroplast) [Pyrus pyrifolia]
BAK82101.1 ribulose-1,5-bisphosphate
carboxylase/oxygenase large subunit, partial
(chloroplast) [Pyrus pyrifolia] BAK82103.1
ribulose-1,5-bisphosphate carboxylase/oxygenase large
subunit, partial (chloroplast) [Pyrus pyrifolia]
BAK82105.1 ribulose-1,5-bisphosphate
carboxylase/oxygenase large subunit, partial
(chloroplast) [Pyrus pyrifolia] BAK82107.1
ribulose-1,5-bisphosphate carboxylase/oxygenase large
subunit, partial (chloroplast) [Pyrus fauriei]
BAK82109.1 ribulose-1,5-bisphosphate
carboxylase/oxygenase large subunit, partial
(chloroplast) [Pyrus fauriei] BAK82111.1
ribulose-1,5-bisphosphate carboxylase/oxygenase large
subunit, partial (chloroplast) [Pyrus dimorphophylla]
BAK82113.1 ribulose-1,5-bisphosphate
carboxylase/oxygenase large subunit, partial
(chloroplast) [Pyrus betulifolia] BAK82115.1
ribulose-1,5-bisphosphate carboxylase/oxygenase large
subunit, partial (chloroplast) [Pyrus ussuriensis var.
aromatica] BAK82117.1 ribulose-1,5-bisphosphate
carboxylase/oxygenase large subunit, partial
(chloroplast) [Pyrus ussuriensis var. aromatica]
Length = 40
Score = 80.1 bits (196), Expect = 5e-17
Identities = 37/40 (92%), Positives = 39/40 (97%)
Frame = +2
Query: 5 DLAREGNEIIREAAKWSPELAAACEVWKEIKFEFEAVDIL 124
DLAREGNEIIREA+KWSPELAAACEVWKEIKFEFEA+D L
Sbjct: 1 DLAREGNEIIREASKWSPELAAACEVWKEIKFEFEAMDTL 40