BLASTX nr result

ID: Panax24_contig00035208 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00035208
         (407 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KVH91686.1 Armadillo-like helical [Cynara cardunculus var. scoly...    77   6e-14

>KVH91686.1 Armadillo-like helical [Cynara cardunculus var. scolymus]
          Length = 616

 Score = 77.4 bits (189), Expect = 6e-14
 Identities = 48/107 (44%), Positives = 58/107 (54%), Gaps = 5/107 (4%)
 Frame = +2

Query: 101 MAAKNKQGDNSKKRKQIPGAK--GELGKSITXXXXXXXXXXXXD--LKKPFKSSEHG-SL 265
           MA KN+QGD S KRK+IPG    G+ GK+              +   KKPF SS+H    
Sbjct: 1   MAFKNQQGDQSNKRKRIPGGTKGGDGGKTSQKKKLKTPSNDQSNKGFKKPFSSSKHHHGK 60

Query: 266 ASAKPKFEKSGTVENVPKTKREARLQXXXXXXXXXXXXXXHYSLEQE 406
           A  KP+F+KS T +NVPKTKRE RLQ              HY+LEQE
Sbjct: 61  ADGKPRFDKSDTAQNVPKTKRELRLQAKELAEARKKKRKPHYTLEQE 107


Top