BLASTX nr result

ID: Panax24_contig00035173 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00035173
         (862 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_006340722.1 PREDICTED: zinc finger CCCH domain-containing pro...    58   8e-06

>XP_006340722.1 PREDICTED: zinc finger CCCH domain-containing protein 68 [Solanum
           tuberosum]
          Length = 599

 Score = 57.8 bits (138), Expect = 8e-06
 Identities = 42/127 (33%), Positives = 63/127 (49%), Gaps = 10/127 (7%)
 Frame = -2

Query: 615 KHKDEGSLIDTNLLMLFLNNPEIVPKLISE--LGASANTGSKT-----ASMPNEVKSSFS 457
           K +++ SLIDTNLL+  L NP+ +PKL+++  L  +A TG+ T     A+M   V     
Sbjct: 307 KSQEQDSLIDTNLLVRLLLNPKEIPKLMNDHGLATNAKTGAATIDSLVAAMSRPVDLPVP 366

Query: 456 LPSSKFDQVMKLSTNEHGVRSKIGVHISEPKAM---TPVSFSSSKPELKMKFKNTHEPPP 286
           LP +K D+V+    NE+         I  PK M    P++ +  +  +K    N    PP
Sbjct: 367 LPRTKPDKVIIKPINEYQAPHAGSGPIFGPKPMAKSVPLTMTKPETSVKSNLVNEQRAPP 426

Query: 285 RVATIPI 265
            V T  I
Sbjct: 427 HVGTANI 433


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