BLASTX nr result
ID: Panax24_contig00035070
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax24_contig00035070
(385 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_017254804.1 PREDICTED: putative pentatricopeptide repeat-cont... 131 2e-33
XP_010255177.1 PREDICTED: pentatricopeptide repeat-containing pr... 119 6e-29
XP_019174103.1 PREDICTED: pentatricopeptide repeat-containing pr... 107 1e-24
KNA15281.1 hypothetical protein SOVF_099680 [Spinacia oleracea] 100 6e-22
XP_010671552.1 PREDICTED: pentatricopeptide repeat-containing pr... 99 8e-22
XP_010664915.1 PREDICTED: putative pentatricopeptide repeat-cont... 96 1e-20
XP_006852897.2 PREDICTED: putative pentatricopeptide repeat-cont... 80 6e-15
XP_008777992.1 PREDICTED: putative pentatricopeptide repeat-cont... 79 2e-14
KZM92608.1 hypothetical protein DCAR_020027 [Daucus carota subsp... 78 2e-14
XP_010909359.1 PREDICTED: pentatricopeptide repeat-containing pr... 74 7e-13
XP_018684570.1 PREDICTED: pentatricopeptide repeat-containing pr... 62 1e-08
XP_009409010.1 PREDICTED: pentatricopeptide repeat-containing pr... 62 1e-08
>XP_017254804.1 PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial [Daucus carota subsp. sativus]
Length = 546
Score = 131 bits (329), Expect = 2e-33
Identities = 70/121 (57%), Positives = 86/121 (71%)
Frame = +3
Query: 21 PFHYLRTFIPIVKTLSKNQKNFNALNNLDSLLIQTQFFDSSTSLIVIDYLSLIKNLGRAN 200
P +YL TFIP +K LS+N +N NAL +LDSLL Q F DS+ SLIVI YL IK LGRA
Sbjct: 46 PLNYLLTFIPQIKALSENPRNKNALTSLDSLLGQAHFLDSAASLIVIQYLCEIKKLGRAK 105
Query: 201 DVLLDLKAKGKVSDYFLYSLVADCLVRNGKIDEVEIV*SELCGCQLMSKPKIDISDYVIY 380
DV L LK++GK+ D L+SLV DCLV N I +VE+V +ELCG L KID+ DYV+Y
Sbjct: 106 DVFLKLKSEGKLKDCILFSLVYDCLVANSGIHDVEVVWNELCGNDL----KIDVCDYVVY 161
Query: 381 L 383
+
Sbjct: 162 V 162
>XP_010255177.1 PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Nelumbo nucifera]
Length = 564
Score = 119 bits (298), Expect = 6e-29
Identities = 59/122 (48%), Positives = 86/122 (70%)
Frame = +3
Query: 18 GPFHYLRTFIPIVKTLSKNQKNFNALNNLDSLLIQTQFFDSSTSLIVIDYLSLIKNLGRA 197
G YL+ F +++ LS N +N AL+ LD +L +T +FDS+TS++VID LS ++ LGRA
Sbjct: 55 GRVFYLKEFCALIRNLSNNNRNHEALSALDLMLTKTHYFDSATSVLVIDGLSRLRMLGRA 114
Query: 198 NDVLLDLKAKGKVSDYFLYSLVADCLVRNGKIDEVEIV*SELCGCQLMSKPKIDISDYVI 377
+L +L++ GKVSDYFLYSLV CLV G+I++ + +E+CG L S +ID S++VI
Sbjct: 115 KALLKNLRSNGKVSDYFLYSLVIHCLVNVGRIEDADSFWNEVCGSDLSSDRRIDSSEFVI 174
Query: 378 YL 383
YL
Sbjct: 175 YL 176
>XP_019174103.1 PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Ipomoea nil]
Length = 542
Score = 107 bits (266), Expect = 1e-24
Identities = 57/126 (45%), Positives = 83/126 (65%)
Frame = +3
Query: 6 NNFAGPFHYLRTFIPIVKTLSKNQKNFNALNNLDSLLIQTQFFDSSTSLIVIDYLSLIKN 185
+N YL++F ++++LSKN +N+ AL LD+ L QT F +TS+IVID+LS IK
Sbjct: 39 SNIPNTLQYLQSFRSLIESLSKNPRNYKALTTLDTFLAQTHCFTPATSVIVIDFLSQIKK 98
Query: 186 LGRANDVLLDLKAKGKVSDYFLYSLVADCLVRNGKIDEVEIV*SELCGCQLMSKPKIDIS 365
L RA V+ LK +GKVSD+FLY LV + LV++ + VE V +E+CG S +I S
Sbjct: 99 LQRAKAVVHSLKCQGKVSDHFLYGLVFEFLVKDENFNAVETVWAEICG----SDVRISAS 154
Query: 366 DYVIYL 383
DY+I++
Sbjct: 155 DYIIHV 160
>KNA15281.1 hypothetical protein SOVF_099680 [Spinacia oleracea]
Length = 572
Score = 99.8 bits (247), Expect = 6e-22
Identities = 54/121 (44%), Positives = 79/121 (65%)
Frame = +3
Query: 21 PFHYLRTFIPIVKTLSKNQKNFNALNNLDSLLIQTQFFDSSTSLIVIDYLSLIKNLGRAN 200
P ++ F + KTL +N +NF AL+ LDSLL +Q FDS TS+ +I+ L +K L RA
Sbjct: 55 PNEFIPQFFSLAKTLFQNPRNFKALSQLDSLLSHSQSFDSVTSVAIIEGLCQLKKLNRAK 114
Query: 201 DVLLDLKAKGKVSDYFLYSLVADCLVRNGKIDEVEIV*SELCGCQLMSKPKIDISDYVIY 380
++ L LK KV+ YF +SLV DCLV++GK+D+VE+ E + + I++SDYVIY
Sbjct: 115 NLFLHLKDNLKVNPYFAFSLVFDCLVKDGKLDDVEVQWGE-----ISNGYGINLSDYVIY 169
Query: 381 L 383
+
Sbjct: 170 V 170
>XP_010671552.1 PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial [Beta vulgaris subsp. vulgaris] KMT20573.1
hypothetical protein BVRB_1g005550 [Beta vulgaris subsp.
vulgaris]
Length = 551
Score = 99.4 bits (246), Expect = 8e-22
Identities = 54/126 (42%), Positives = 79/126 (62%)
Frame = +3
Query: 6 NNFAGPFHYLRTFIPIVKTLSKNQKNFNALNNLDSLLIQTQFFDSSTSLIVIDYLSLIKN 185
N P L F + KTL++N +NF L+ LDSLL QT+ FDS TS+ + + L +K
Sbjct: 44 NPIINPDDLLSQFHSLTKTLAQNSRNFRVLSQLDSLLSQTELFDSVTSIAIFEGLCKLKK 103
Query: 186 LGRANDVLLDLKAKGKVSDYFLYSLVADCLVRNGKIDEVEIV*SELCGCQLMSKPKIDIS 365
L RA +V L LK KV YF +SLV DCLV++G +D+VE+ ++ + + +I++S
Sbjct: 104 LNRAKNVFLHLKDNLKVYPYFAFSLVFDCLVKDGNLDDVEVQWND-----ISNGYEINLS 158
Query: 366 DYVIYL 383
DYVIY+
Sbjct: 159 DYVIYV 164
>XP_010664915.1 PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial [Vitis vinifera]
Length = 536
Score = 96.3 bits (238), Expect = 1e-20
Identities = 51/120 (42%), Positives = 76/120 (63%)
Frame = +3
Query: 24 FHYLRTFIPIVKTLSKNQKNFNALNNLDSLLIQTQFFDSSTSLIVIDYLSLIKNLGRAND 203
F YL+ I LS N +N+ AL+ L+SLL Q D++TS++VI LS + L RA
Sbjct: 34 FLYLKDLFSIFTALSNNPRNYKALSTLNSLLSQAHHLDAATSVLVIHALSQLNKLQRAKS 93
Query: 204 VLLDLKAKGKVSDYFLYSLVADCLVRNGKIDEVEIV*SELCGCQLMSKPKIDISDYVIYL 383
++ +LK++ +S YFLYS+V D +V++G IDEVE ++ + P ID+SDYVIY+
Sbjct: 94 LIFNLKSQANLSHYFLYSVVIDSVVKHGTIDEVEAFWAD-----IFRPPTIDVSDYVIYV 148
>XP_006852897.2 PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial [Amborella trichopoda]
Length = 514
Score = 79.7 bits (195), Expect = 6e-15
Identities = 47/117 (40%), Positives = 67/117 (57%)
Frame = +3
Query: 33 LRTFIPIVKTLSKNQKNFNALNNLDSLLIQTQFFDSSTSLIVIDYLSLIKNLGRANDVLL 212
++ F + L K KN AL +LDSLL FDS+TS++VI L I L RA VL
Sbjct: 1 MKLFNSLFTVLKKENKNLQALRSLDSLLKNDLLFDSATSVLVIHRLCEINQLVRAKKVLS 60
Query: 213 DLKAKGKVSDYFLYSLVADCLVRNGKIDEVEIV*SELCGCQLMSKPKIDISDYVIYL 383
L K+S +FLYS+V C+V++G+I +VE E+ G S I++S ++ YL
Sbjct: 61 QLTRNPKISGFFLYSIVIHCIVKDGRIKDVECTFEEIIGNG--SLANINVSTFMNYL 115
>XP_008777992.1 PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial [Phoenix dactylifera]
Length = 541
Score = 78.6 bits (192), Expect = 2e-14
Identities = 52/130 (40%), Positives = 73/130 (56%), Gaps = 3/130 (2%)
Frame = +3
Query: 3 LNNFAGPF---HYLRTFIPIVKTLSKNQKNFNALNNLDSLLIQTQFFDSSTSLIVIDYLS 173
L+ + PF Y + F +V+ LS+N+ N L +DS L +T DS+TS++V+ LS
Sbjct: 17 LHTASQPFSNLRYAQDFSALVRNLSRNRNNPRLLAAVDSTLAKTPLLDSTTSVLVLRGLS 76
Query: 174 LIKNLGRANDVLLDLKAKGKVSDYFLYSLVADCLVRNGKIDEVEIV*SELCGCQLMSKPK 353
K L RA VL LK +G + + FLYSLV CLV I +VE V E+ S
Sbjct: 77 RCKKLTRAKAVLSGLKERGTIPEPFLYSLVLQCLVPESPIRDVESVWREIGSGP--SNRC 134
Query: 354 IDISDYVIYL 383
+D SD+V+YL
Sbjct: 135 MDASDFVLYL 144
>KZM92608.1 hypothetical protein DCAR_020027 [Daucus carota subsp. sativus]
Length = 501
Score = 78.2 bits (191), Expect = 2e-14
Identities = 41/73 (56%), Positives = 51/73 (69%)
Frame = +3
Query: 165 YLSLIKNLGRANDVLLDLKAKGKVSDYFLYSLVADCLVRNGKIDEVEIV*SELCGCQLMS 344
YL IK LGRA DV L LK++GK+ D L+SLV DCLV N I +VE+V +ELCG L
Sbjct: 44 YLCEIKKLGRAKDVFLKLKSEGKLKDCILFSLVYDCLVANSGIHDVEVVWNELCGNDL-- 101
Query: 345 KPKIDISDYVIYL 383
KID+ DYV+Y+
Sbjct: 102 --KIDVCDYVVYV 112
>XP_010909359.1 PREDICTED: pentatricopeptide repeat-containing protein
At1g63400-like [Elaeis guineensis]
Length = 539
Score = 73.9 bits (180), Expect = 7e-13
Identities = 47/118 (39%), Positives = 67/118 (56%)
Frame = +3
Query: 30 YLRTFIPIVKTLSKNQKNFNALNNLDSLLIQTQFFDSSTSLIVIDYLSLIKNLGRANDVL 209
Y + F +V++LS+N N L LD +L +T DS+TS++V+ LS K L RA VL
Sbjct: 29 YAQDFSALVRSLSRNLNNPRLLAALDCVLAKTPLLDSTTSVLVLRGLSHCKKLTRAKTVL 88
Query: 210 LDLKAKGKVSDYFLYSLVADCLVRNGKIDEVEIV*SELCGCQLMSKPKIDISDYVIYL 383
LK +G + + FLYSLV CLV I +VE V ++ S +D D+V+YL
Sbjct: 89 SGLKERGTIPEPFLYSLVLQCLVPESPIRDVESVWRDIGSGP--SDRCMDALDFVVYL 144
>XP_018684570.1 PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like isoform X2 [Musa acuminata subsp.
malaccensis]
Length = 536
Score = 61.6 bits (148), Expect = 1e-08
Identities = 38/89 (42%), Positives = 50/89 (56%)
Frame = +3
Query: 63 LSKNQKNFNALNNLDSLLIQTQFFDSSTSLIVIDYLSLIKNLGRANDVLLDLKAKGKVSD 242
LSK + +L LDS L + DS+ S+++I LS K L RA VL LK +G V D
Sbjct: 74 LSKTPSDPKSLAALDSALAEAHLLDSTASVLLIRALSRRKKLTRAKSVLSGLKQRGIVPD 133
Query: 243 YFLYSLVADCLVRNGKIDEVEIV*SELCG 329
FLYSLV CL+ I +VE V ++ G
Sbjct: 134 LFLYSLVLQCLLPESPIRDVESVWHDIRG 162
>XP_009409010.1 PREDICTED: pentatricopeptide repeat-containing protein
At1g62720-like isoform X1 [Musa acuminata subsp.
malaccensis] XP_018684569.1 PREDICTED: pentatricopeptide
repeat-containing protein At1g62720-like isoform X1
[Musa acuminata subsp. malaccensis]
Length = 580
Score = 61.6 bits (148), Expect = 1e-08
Identities = 38/89 (42%), Positives = 50/89 (56%)
Frame = +3
Query: 63 LSKNQKNFNALNNLDSLLIQTQFFDSSTSLIVIDYLSLIKNLGRANDVLLDLKAKGKVSD 242
LSK + +L LDS L + DS+ S+++I LS K L RA VL LK +G V D
Sbjct: 74 LSKTPSDPKSLAALDSALAEAHLLDSTASVLLIRALSRRKKLTRAKSVLSGLKQRGIVPD 133
Query: 243 YFLYSLVADCLVRNGKIDEVEIV*SELCG 329
FLYSLV CL+ I +VE V ++ G
Sbjct: 134 LFLYSLVLQCLLPESPIRDVESVWHDIRG 162