BLASTX nr result

ID: Panax24_contig00034939 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00034939
         (448 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AEP60133.1 JAZ2 [Vitis rupestris]                                      55   3e-06
XP_002272363.2 PREDICTED: protein TIFY 10A [Vitis vinifera]            55   4e-06

>AEP60133.1 JAZ2 [Vitis rupestris]
          Length = 286

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 50/127 (39%), Positives = 68/127 (53%), Gaps = 17/127 (13%)
 Frame = -2

Query: 336 FNGRKSAP-ENKSNFAQTCNLFTHYLKEKERKTCLEHLNHLGIMNGKQESSERP----AA 172
           F GRKS    ++SNF+QTCNL + +LKEK R   L     LG M GK E+  RP    ++
Sbjct: 10  FAGRKSGKLPDRSNFSQTCNLLSQFLKEKGRFGDLS----LG-MAGKSETKGRPESFKSS 64

Query: 171 TTTMDQLLKG-DTDKSGQISTQSSNL-----FPQHAPNMGAYTSVQDAIN------NITS 28
           T + D L K   ++ SGQ    SSNL     +PQ A   G+  S+ +AIN      + T+
Sbjct: 65  TMSFDLLNKDKSSEASGQNGGGSSNLKSSDFYPQFA-GFGSLASIDEAINMADFRKSATT 123

Query: 27  SSEQAAM 7
            SE + M
Sbjct: 124 ESETSQM 130


>XP_002272363.2 PREDICTED: protein TIFY 10A [Vitis vinifera]
          Length = 286

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 46/127 (36%), Positives = 68/127 (53%), Gaps = 17/127 (13%)
 Frame = -2

Query: 336 FNGRKSAP-ENKSNFAQTCNLFTHYLKEKERKTCLEHLNHLGIMNGKQESSERP----AA 172
           F GRKS    ++SNF+QTCNL + +LKEK R   L     LG M GK E+  RP    ++
Sbjct: 10  FAGRKSGKLPDRSNFSQTCNLLSQFLKEKGRFGDLS----LG-MAGKSETKGRPESFKSS 64

Query: 171 TTTMDQLLKGDTDKS------GQISTQSSNLFPQHAPNMGAYTSVQDAIN------NITS 28
           T + D L K  + ++      G  + +SS+ +PQ A   G+  S+ +AIN      + T+
Sbjct: 65  TMSFDLLNKDKSSEASGQNVGGSSNLKSSDFYPQFA-GFGSLASIDEAINMADFRKSATT 123

Query: 27  SSEQAAM 7
            SE + M
Sbjct: 124 ESETSQM 130


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