BLASTX nr result
ID: Panax24_contig00034794
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax24_contig00034794
(392 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KVI10427.1 Ribonuclease CAF1 [Cynara cardunculus var. scolymus] 137 4e-35
CAN76999.1 hypothetical protein VITISV_007764 [Vitis vinifera] 131 6e-33
CBI39748.3 unnamed protein product, partial [Vitis vinifera] 130 8e-33
XP_010644585.1 PREDICTED: poly(A)-specific ribonuclease PARN [Vi... 130 8e-33
XP_011097756.1 PREDICTED: poly(A)-specific ribonuclease PARN [Se... 128 5e-32
XP_010273436.1 PREDICTED: poly(A)-specific ribonuclease PARN iso... 124 2e-30
XP_010273434.1 PREDICTED: poly(A)-specific ribonuclease PARN iso... 124 2e-30
XP_019194677.1 PREDICTED: poly(A)-specific ribonuclease PARN [Ip... 123 3e-30
OMP04232.1 Ribonuclease CAF1 [Corchorus olitorius] 121 2e-29
OMO83755.1 Ribonuclease CAF1 [Corchorus capsularis] 121 2e-29
EOY12009.1 Poly(A)-specific ribonuclease PARN isoform 1 [Theobro... 121 2e-29
XP_017979507.1 PREDICTED: poly(A)-specific ribonuclease PARN [Th... 120 3e-29
XP_016743698.1 PREDICTED: poly(A)-specific ribonuclease PARN-lik... 120 4e-29
XP_016743697.1 PREDICTED: poly(A)-specific ribonuclease PARN-lik... 120 4e-29
XP_017638862.1 PREDICTED: poly(A)-specific ribonuclease PARN [Go... 120 4e-29
XP_012841818.1 PREDICTED: poly(A)-specific ribonuclease PARN [Er... 119 7e-29
XP_016581439.1 PREDICTED: poly(A)-specific ribonuclease PARN [Ca... 119 7e-29
XP_019249878.1 PREDICTED: poly(A)-specific ribonuclease PARN iso... 119 7e-29
BAE47488.1 polyA specific ribonuclease [Arabidopsis thaliana] 110 8e-29
XP_012461853.1 PREDICTED: poly(A)-specific ribonuclease PARN iso... 119 9e-29
>KVI10427.1 Ribonuclease CAF1 [Cynara cardunculus var. scolymus]
Length = 741
Score = 137 bits (345), Expect = 4e-35
Identities = 70/106 (66%), Positives = 80/106 (75%)
Frame = -2
Query: 319 MKKQWMVRVLSKTLTLTXXXXXXXXXXXXXXXXXXXXXKNVTKSNFESTLAELRRHVRDA 140
MK+ WMVR +SKTLTL NVT+SNFE +LA+LRRHVRD+
Sbjct: 39 MKQHWMVRAISKTLTLIPIPFHSSRASFSSPSSSFALK-NVTRSNFELSLADLRRHVRDS 97
Query: 139 DFVAIDLEMTGVTSAPWRESFEFDRFDIRYLKLKDSAEKFAIVQFG 2
DFV+IDLEMTGVTSAPWRESFEFDRFD+RYLK+KDSAEKFA+VQFG
Sbjct: 98 DFVSIDLEMTGVTSAPWRESFEFDRFDVRYLKVKDSAEKFAVVQFG 143
>CAN76999.1 hypothetical protein VITISV_007764 [Vitis vinifera]
Length = 720
Score = 131 bits (329), Expect = 6e-33
Identities = 71/107 (66%), Positives = 81/107 (75%), Gaps = 3/107 (2%)
Frame = -2
Query: 313 KQW-MVRVLSKTLT--LTXXXXXXXXXXXXXXXXXXXXXKNVTKSNFESTLAELRRHVRD 143
KQW ++R LS++LT L KNVTKSNFES+LA+LRRHVRD
Sbjct: 2 KQWPLLRFLSESLTRTLAAHSAYTLRFLSSATASPTFALKNVTKSNFESSLADLRRHVRD 61
Query: 142 ADFVAIDLEMTGVTSAPWRESFEFDRFDIRYLKLKDSAEKFAIVQFG 2
ADFVAIDLEMTGVTSAPWRESFEFDRFD++YLK+KDSAEKFA+VQFG
Sbjct: 62 ADFVAIDLEMTGVTSAPWRESFEFDRFDVQYLKVKDSAEKFAVVQFG 108
>CBI39748.3 unnamed protein product, partial [Vitis vinifera]
Length = 715
Score = 130 bits (328), Expect = 8e-33
Identities = 71/107 (66%), Positives = 81/107 (75%), Gaps = 3/107 (2%)
Frame = -2
Query: 313 KQW-MVRVLSKTLT--LTXXXXXXXXXXXXXXXXXXXXXKNVTKSNFESTLAELRRHVRD 143
KQW ++R LS++LT L KNVTKSNFES+LA+LRRHVRD
Sbjct: 2 KQWPLLRSLSESLTRTLAAHSAYTLRFLSSATASPTFALKNVTKSNFESSLADLRRHVRD 61
Query: 142 ADFVAIDLEMTGVTSAPWRESFEFDRFDIRYLKLKDSAEKFAIVQFG 2
ADFVAIDLEMTGVTSAPWRESFEFDRFD++YLK+KDSAEKFA+VQFG
Sbjct: 62 ADFVAIDLEMTGVTSAPWRESFEFDRFDVQYLKVKDSAEKFAVVQFG 108
>XP_010644585.1 PREDICTED: poly(A)-specific ribonuclease PARN [Vitis vinifera]
XP_019073011.1 PREDICTED: poly(A)-specific ribonuclease
PARN [Vitis vinifera]
Length = 734
Score = 130 bits (328), Expect = 8e-33
Identities = 71/107 (66%), Positives = 81/107 (75%), Gaps = 3/107 (2%)
Frame = -2
Query: 313 KQW-MVRVLSKTLT--LTXXXXXXXXXXXXXXXXXXXXXKNVTKSNFESTLAELRRHVRD 143
KQW ++R LS++LT L KNVTKSNFES+LA+LRRHVRD
Sbjct: 2 KQWPLLRSLSESLTRTLAAHSAYTLRFLSSATASPTFALKNVTKSNFESSLADLRRHVRD 61
Query: 142 ADFVAIDLEMTGVTSAPWRESFEFDRFDIRYLKLKDSAEKFAIVQFG 2
ADFVAIDLEMTGVTSAPWRESFEFDRFD++YLK+KDSAEKFA+VQFG
Sbjct: 62 ADFVAIDLEMTGVTSAPWRESFEFDRFDVQYLKVKDSAEKFAVVQFG 108
>XP_011097756.1 PREDICTED: poly(A)-specific ribonuclease PARN [Sesamum indicum]
Length = 725
Score = 128 bits (322), Expect = 5e-32
Identities = 66/106 (62%), Positives = 76/106 (71%)
Frame = -2
Query: 319 MKKQWMVRVLSKTLTLTXXXXXXXXXXXXXXXXXXXXXKNVTKSNFESTLAELRRHVRDA 140
MK+ ++VR L++T T KNVTKSNFE LAELR HVR+A
Sbjct: 1 MKRSYLVRALTRTRNRTSLLTRSLCSSASQPSGADVALKNVTKSNFEPALAELRHHVREA 60
Query: 139 DFVAIDLEMTGVTSAPWRESFEFDRFDIRYLKLKDSAEKFAIVQFG 2
DFVA+DLEMTGVTSAPWRESFEFDR DI+YLK+KDSAEKFA+VQFG
Sbjct: 61 DFVAVDLEMTGVTSAPWRESFEFDRSDIQYLKIKDSAEKFAVVQFG 106
>XP_010273436.1 PREDICTED: poly(A)-specific ribonuclease PARN isoform X2 [Nelumbo
nucifera]
Length = 723
Score = 124 bits (311), Expect = 2e-30
Identities = 65/106 (61%), Positives = 74/106 (69%)
Frame = -2
Query: 319 MKKQWMVRVLSKTLTLTXXXXXXXXXXXXXXXXXXXXXKNVTKSNFESTLAELRRHVRDA 140
MKK +VR S+ LTL VTK+NFES L +LRRHVRDA
Sbjct: 1 MKKPALVRAFSEALTLVRSTYLLTRPFSSATPSTFSVK-KVTKTNFESALEDLRRHVRDA 59
Query: 139 DFVAIDLEMTGVTSAPWRESFEFDRFDIRYLKLKDSAEKFAIVQFG 2
DFV+ DLEMTGVTSAPWR+SFEFDRFD+RYLK+KDSAEKFA+VQFG
Sbjct: 60 DFVSFDLEMTGVTSAPWRDSFEFDRFDVRYLKVKDSAEKFAVVQFG 105
>XP_010273434.1 PREDICTED: poly(A)-specific ribonuclease PARN isoform X1 [Nelumbo
nucifera]
Length = 724
Score = 124 bits (311), Expect = 2e-30
Identities = 65/106 (61%), Positives = 74/106 (69%)
Frame = -2
Query: 319 MKKQWMVRVLSKTLTLTXXXXXXXXXXXXXXXXXXXXXKNVTKSNFESTLAELRRHVRDA 140
MKK +VR S+ LTL VTK+NFES L +LRRHVRDA
Sbjct: 1 MKKPALVRAFSEALTLVRSTYLLTRPFSSATPSTFSVK-KVTKTNFESALEDLRRHVRDA 59
Query: 139 DFVAIDLEMTGVTSAPWRESFEFDRFDIRYLKLKDSAEKFAIVQFG 2
DFV+ DLEMTGVTSAPWR+SFEFDRFD+RYLK+KDSAEKFA+VQFG
Sbjct: 60 DFVSFDLEMTGVTSAPWRDSFEFDRFDVRYLKVKDSAEKFAVVQFG 105
>XP_019194677.1 PREDICTED: poly(A)-specific ribonuclease PARN [Ipomoea nil]
Length = 681
Score = 123 bits (309), Expect = 3e-30
Identities = 65/106 (61%), Positives = 74/106 (69%)
Frame = -2
Query: 319 MKKQWMVRVLSKTLTLTXXXXXXXXXXXXXXXXXXXXXKNVTKSNFESTLAELRRHVRDA 140
MKKQWM+R LSKTL NVT+SNFES L +LR ++ A
Sbjct: 1 MKKQWMIRALSKTLISAPHAGLTSFSRALCSSAFALK--NVTRSNFESALEDLRGLIKAA 58
Query: 139 DFVAIDLEMTGVTSAPWRESFEFDRFDIRYLKLKDSAEKFAIVQFG 2
DFVAIDLEMTGVTSAPWR+SFE DR+DIRYLK+KDSAEKFA+VQFG
Sbjct: 59 DFVAIDLEMTGVTSAPWRDSFELDRYDIRYLKVKDSAEKFAVVQFG 104
>OMP04232.1 Ribonuclease CAF1 [Corchorus olitorius]
Length = 716
Score = 121 bits (303), Expect = 2e-29
Identities = 57/67 (85%), Positives = 64/67 (95%)
Frame = -2
Query: 202 NVTKSNFESTLAELRRHVRDADFVAIDLEMTGVTSAPWRESFEFDRFDIRYLKLKDSAEK 23
+VT+SNF+STL ELR HVR ADFVAID+EMTGVTSAPWRESFEFDRFDIRYLK+KDSAEK
Sbjct: 40 HVTRSNFDSTLVELRSHVRAADFVAIDMEMTGVTSAPWRESFEFDRFDIRYLKVKDSAEK 99
Query: 22 FAIVQFG 2
FA++QFG
Sbjct: 100 FAVLQFG 106
>OMO83755.1 Ribonuclease CAF1 [Corchorus capsularis]
Length = 716
Score = 121 bits (303), Expect = 2e-29
Identities = 57/67 (85%), Positives = 64/67 (95%)
Frame = -2
Query: 202 NVTKSNFESTLAELRRHVRDADFVAIDLEMTGVTSAPWRESFEFDRFDIRYLKLKDSAEK 23
+VT+SNF+STL ELR HVR ADFVAID+EMTGVTSAPWRESFEFDRFDIRYLK+KDSAEK
Sbjct: 40 HVTRSNFDSTLVELRSHVRAADFVAIDMEMTGVTSAPWRESFEFDRFDIRYLKVKDSAEK 99
Query: 22 FAIVQFG 2
FA++QFG
Sbjct: 100 FAVLQFG 106
>EOY12009.1 Poly(A)-specific ribonuclease PARN isoform 1 [Theobroma cacao]
EOY12010.1 Poly(A)-specific ribonuclease PARN isoform 1
[Theobroma cacao]
Length = 726
Score = 121 bits (303), Expect = 2e-29
Identities = 58/67 (86%), Positives = 63/67 (94%)
Frame = -2
Query: 202 NVTKSNFESTLAELRRHVRDADFVAIDLEMTGVTSAPWRESFEFDRFDIRYLKLKDSAEK 23
+VT+SNF+S L ELR HVR ADFVAIDLEMTGVTSAPWRESFEFDRFDIRYLK+KDSAEK
Sbjct: 40 HVTRSNFDSALVELRSHVRAADFVAIDLEMTGVTSAPWRESFEFDRFDIRYLKVKDSAEK 99
Query: 22 FAIVQFG 2
FA+VQFG
Sbjct: 100 FAVVQFG 106
>XP_017979507.1 PREDICTED: poly(A)-specific ribonuclease PARN [Theobroma cacao]
Length = 726
Score = 120 bits (302), Expect = 3e-29
Identities = 57/67 (85%), Positives = 63/67 (94%)
Frame = -2
Query: 202 NVTKSNFESTLAELRRHVRDADFVAIDLEMTGVTSAPWRESFEFDRFDIRYLKLKDSAEK 23
+VT+SNF+S L ELR HVR ADFVAIDLEMTGVTSAPWRESFEFDRFDIRYLK+KDSAEK
Sbjct: 40 HVTRSNFDSALVELRSHVRAADFVAIDLEMTGVTSAPWRESFEFDRFDIRYLKVKDSAEK 99
Query: 22 FAIVQFG 2
FA++QFG
Sbjct: 100 FAVIQFG 106
>XP_016743698.1 PREDICTED: poly(A)-specific ribonuclease PARN-like isoform X2
[Gossypium hirsutum]
Length = 681
Score = 120 bits (301), Expect = 4e-29
Identities = 57/67 (85%), Positives = 63/67 (94%)
Frame = -2
Query: 202 NVTKSNFESTLAELRRHVRDADFVAIDLEMTGVTSAPWRESFEFDRFDIRYLKLKDSAEK 23
+VT+SNFES L ELR HVR ADFVAID+EMTGVTSAPWRESFEFDRFDIRYLK+KDSAEK
Sbjct: 34 HVTRSNFESALVELRSHVRAADFVAIDMEMTGVTSAPWRESFEFDRFDIRYLKVKDSAEK 93
Query: 22 FAIVQFG 2
FA++QFG
Sbjct: 94 FAVLQFG 100
>XP_016743697.1 PREDICTED: poly(A)-specific ribonuclease PARN-like isoform X1
[Gossypium hirsutum]
Length = 718
Score = 120 bits (301), Expect = 4e-29
Identities = 57/67 (85%), Positives = 63/67 (94%)
Frame = -2
Query: 202 NVTKSNFESTLAELRRHVRDADFVAIDLEMTGVTSAPWRESFEFDRFDIRYLKLKDSAEK 23
+VT+SNFES L ELR HVR ADFVAID+EMTGVTSAPWRESFEFDRFDIRYLK+KDSAEK
Sbjct: 34 HVTRSNFESALVELRSHVRAADFVAIDMEMTGVTSAPWRESFEFDRFDIRYLKVKDSAEK 93
Query: 22 FAIVQFG 2
FA++QFG
Sbjct: 94 FAVLQFG 100
>XP_017638862.1 PREDICTED: poly(A)-specific ribonuclease PARN [Gossypium arboreum]
KHF97874.1 Poly (A)-specific ribonuclease PARN -like
protein [Gossypium arboreum]
Length = 718
Score = 120 bits (301), Expect = 4e-29
Identities = 57/67 (85%), Positives = 63/67 (94%)
Frame = -2
Query: 202 NVTKSNFESTLAELRRHVRDADFVAIDLEMTGVTSAPWRESFEFDRFDIRYLKLKDSAEK 23
+VT+SNFES L ELR HVR ADFVAID+EMTGVTSAPWRESFEFDRFDIRYLK+KDSAEK
Sbjct: 34 HVTRSNFESALVELRSHVRAADFVAIDMEMTGVTSAPWRESFEFDRFDIRYLKVKDSAEK 93
Query: 22 FAIVQFG 2
FA++QFG
Sbjct: 94 FAVLQFG 100
>XP_012841818.1 PREDICTED: poly(A)-specific ribonuclease PARN [Erythranthe guttata]
Length = 688
Score = 119 bits (299), Expect = 7e-29
Identities = 57/67 (85%), Positives = 63/67 (94%)
Frame = -2
Query: 202 NVTKSNFESTLAELRRHVRDADFVAIDLEMTGVTSAPWRESFEFDRFDIRYLKLKDSAEK 23
NVTK NFE LAELRRHVR+ADFV+IDLEMTGVTSAPWRESF+FDR DI+YLK+KDSAEK
Sbjct: 46 NVTKPNFEPALAELRRHVREADFVSIDLEMTGVTSAPWRESFDFDRPDIQYLKIKDSAEK 105
Query: 22 FAIVQFG 2
FA+VQFG
Sbjct: 106 FAVVQFG 112
>XP_016581439.1 PREDICTED: poly(A)-specific ribonuclease PARN [Capsicum annuum]
Length = 711
Score = 119 bits (299), Expect = 7e-29
Identities = 57/67 (85%), Positives = 63/67 (94%)
Frame = -2
Query: 202 NVTKSNFESTLAELRRHVRDADFVAIDLEMTGVTSAPWRESFEFDRFDIRYLKLKDSAEK 23
NVTKSNFES L +LR +RDADFVA+DLEMTGVTSAPWRESFEFDR+DIRYLK+KDSAEK
Sbjct: 40 NVTKSNFESVLKDLRGLLRDADFVAVDLEMTGVTSAPWRESFEFDRYDIRYLKVKDSAEK 99
Query: 22 FAIVQFG 2
FA+VQFG
Sbjct: 100 FAVVQFG 106
>XP_019249878.1 PREDICTED: poly(A)-specific ribonuclease PARN isoform X1 [Nicotiana
attenuata] OIT00543.1 poly(a)-specific ribonuclease parn
[Nicotiana attenuata]
Length = 718
Score = 119 bits (299), Expect = 7e-29
Identities = 57/67 (85%), Positives = 63/67 (94%)
Frame = -2
Query: 202 NVTKSNFESTLAELRRHVRDADFVAIDLEMTGVTSAPWRESFEFDRFDIRYLKLKDSAEK 23
NVTKSNFES L +LR VRDADFVA+DLEMTGVTSAPWR+SFEFDR+DIRYLK+KDSAEK
Sbjct: 44 NVTKSNFESALKDLRGLVRDADFVAVDLEMTGVTSAPWRDSFEFDRYDIRYLKVKDSAEK 103
Query: 22 FAIVQFG 2
FA+VQFG
Sbjct: 104 FAVVQFG 110
>BAE47488.1 polyA specific ribonuclease [Arabidopsis thaliana]
Length = 131
Score = 110 bits (276), Expect = 8e-29
Identities = 52/67 (77%), Positives = 62/67 (92%)
Frame = -2
Query: 202 NVTKSNFESTLAELRRHVRDADFVAIDLEMTGVTSAPWRESFEFDRFDIRYLKLKDSAEK 23
+VT+SNFE+TL +LR V+ ADFVAIDLEMTGVTSAPWR+S EFDR+D+RYLK+KDSAEK
Sbjct: 40 HVTRSNFETTLNDLRSLVKAADFVAIDLEMTGVTSAPWRDSLEFDRYDVRYLKVKDSAEK 99
Query: 22 FAIVQFG 2
FA+VQFG
Sbjct: 100 FAVVQFG 106
>XP_012461853.1 PREDICTED: poly(A)-specific ribonuclease PARN isoform X2 [Gossypium
raimondii]
Length = 681
Score = 119 bits (298), Expect = 9e-29
Identities = 56/67 (83%), Positives = 63/67 (94%)
Frame = -2
Query: 202 NVTKSNFESTLAELRRHVRDADFVAIDLEMTGVTSAPWRESFEFDRFDIRYLKLKDSAEK 23
+VT+SNF+S L ELR HVR ADFVAID+EMTGVTSAPWRESFEFDRFDIRYLK+KDSAEK
Sbjct: 34 HVTRSNFDSALVELRSHVRAADFVAIDMEMTGVTSAPWRESFEFDRFDIRYLKVKDSAEK 93
Query: 22 FAIVQFG 2
FA++QFG
Sbjct: 94 FAVLQFG 100