BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00034711
         (487 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ADN33807.1 ty1-copia retrotransposon protein [Cucumis melo subsp...    78   8e-14
CAN78262.1 hypothetical protein VITISV_006704 [Vitis vinifera]         68   3e-12
CAN73567.1 hypothetical protein VITISV_003451 [Vitis vinifera]         60   3e-09
KZV19365.1 retrovirus-related Pol polyprotein from transposon TN...    64   4e-09
KZV26201.1 hypothetical protein F511_28547 [Dorcoceras hygrometr...    64   4e-09
KZV31144.1 hypothetical protein F511_24590 [Dorcoceras hygrometr...    64   4e-09
KZV23924.1 hypothetical protein F511_22499 [Dorcoceras hygrometr...    64   4e-09
KYP72325.1 Retrovirus-related Pol polyprotein from transposon TN...    64   6e-09
KYP36589.1 Retrovirus-related Pol polyprotein from transposon TN...    64   6e-09
KYP33726.1 Retrovirus-related Pol polyprotein from transposon TN...    64   7e-09
KYP64289.1 Retrovirus-related Pol polyprotein from transposon TN...    64   7e-09
KYP64290.1 Retrovirus-related Pol polyprotein from transposon TN...    64   7e-09
JAU38512.1 Copia protein, partial [Noccaea caerulescens]               60   9e-09
CAN62130.1 hypothetical protein VITISV_019730 [Vitis vinifera]         61   2e-08
CAN66637.1 hypothetical protein VITISV_011340 [Vitis vinifera]         60   2e-08
OMO89770.1 Integrase, catalytic core [Corchorus capsularis]            60   2e-08
AAT38766.2 Polyprotein, putative [Solanum demissum]                    61   3e-08
OMO54671.1 Integrase, catalytic core [Corchorus capsularis]            59   4e-08
KYP49849.1 Retrovirus-related Pol polyprotein from transposon TN...    60   6e-08
KYP31709.1 Retrovirus-related Pol polyprotein from transposon TN...    61   6e-08

>ADN33807.1 ty1-copia retrotransposon protein [Cucumis melo subsp. melo]
          Length = 1038

 Score = 78.2 bits (191), Expect = 8e-14
 Identities = 34/52 (65%), Positives = 39/52 (75%)
 Frame = +3

Query: 330 GEACLSK*SIFNRVPHKRIDSLPCQLWKEHAPNLGYLKMWGCLAKVAIPEFK 485
           GEA LS   I NR+PHKR+D  P +LWK HAPNL YLK+WGCLAKV +P  K
Sbjct: 654 GEAVLSACFILNRIPHKRLDKTPYELWKGHAPNLSYLKVWGCLAKVPLPALK 705


>CAN78262.1 hypothetical protein VITISV_006704 [Vitis vinifera]
          Length = 565

 Score = 67.8 bits (164), Expect(3) = 3e-12
 Identities = 30/52 (57%), Positives = 38/52 (73%)
 Frame = +3

Query: 330 GEACLSK*SIFNRVPHKRIDSLPCQLWKEHAPNLGYLKMWGCLAKVAIPEFK 485
           GEA LS   I NR+P+K+    P +LWK +APN+ YLK+WGCLAKV +PE K
Sbjct: 513 GEAILSACHIQNRIPYKKTGKTPYELWKGYAPNIAYLKVWGCLAKVLLPEPK 564



 Score = 25.4 bits (54), Expect(3) = 3e-12
 Identities = 10/17 (58%), Positives = 15/17 (88%)
 Frame = +2

Query: 266 EKIDRTLKDIMNVMLIS 316
           E+ +RTLK++MN ML+S
Sbjct: 488 ERKNRTLKEMMNAMLVS 504



 Score = 25.0 bits (53), Expect(3) = 3e-12
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = +2

Query: 164 DDNSRYTQIYLIAFKR*SEKNVY*IKQRLKIS*KEKIDRTLKD 292
           DD SRYT++YL+  K  +       K  ++    +KI+R   D
Sbjct: 410 DDYSRYTRVYLLRNKDEARDAFIKYKNEVENQLNKKIERLRTD 452


>CAN73567.1 hypothetical protein VITISV_003451 [Vitis vinifera]
          Length = 1277

 Score = 59.7 bits (143), Expect(2) = 3e-09
 Identities = 25/49 (51%), Positives = 34/49 (69%)
 Frame = +3

Query: 330 GEACLSK*SIFNRVPHKRIDSLPCQLWKEHAPNLGYLKMWGCLAKVAIP 476
           GEA L+   + N+VP K+ +  P +LWK   P+  YL+MWGCLAKVA+P
Sbjct: 657 GEAILTANYLLNKVPKKKAEKTPYELWKGRKPSYTYLRMWGCLAKVAVP 705



 Score = 28.5 bits (62), Expect(2) = 3e-09
 Identities = 12/20 (60%), Positives = 17/20 (85%)
 Frame = +2

Query: 266 EKIDRTLKDIMNVMLISFPI 325
           E+ +RTLK++MN MLISF +
Sbjct: 632 ERKNRTLKEMMNAMLISFSL 651


>KZV19365.1 retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Dorcoceras hygrometricum]
          Length = 407

 Score = 64.3 bits (155), Expect = 4e-09
 Identities = 28/52 (53%), Positives = 36/52 (69%)
 Frame = +3

Query: 330 GEACLSK*SIFNRVPHKRIDSLPCQLWKEHAPNLGYLKMWGCLAKVAIPEFK 485
           GEA LS   I N++P K+ D  P +LWK H P+  YLK+WGCLAKV +P+ K
Sbjct: 328 GEAILSANHILNKIPQKKKDKTPYELWKGHKPSYKYLKVWGCLAKVEVPKPK 379


>KZV26201.1 hypothetical protein F511_28547 [Dorcoceras hygrometricum]
          Length = 979

 Score = 64.3 bits (155), Expect(2) = 4e-09
 Identities = 28/52 (53%), Positives = 36/52 (69%)
 Frame = +3

Query: 330 GEACLSK*SIFNRVPHKRIDSLPCQLWKEHAPNLGYLKMWGCLAKVAIPEFK 485
           GEA LS   I N++P K+ D  P +LWK H P+  YLK+WGCLAKV +P+ K
Sbjct: 629 GEAILSANHILNKIPQKKKDKTPYELWKGHKPSYKYLKVWGCLAKVEVPKPK 680



 Score = 23.5 bits (49), Expect(2) = 4e-09
 Identities = 9/17 (52%), Positives = 15/17 (88%)
 Frame = +2

Query: 266 EKIDRTLKDIMNVMLIS 316
           E+ +RTLK++MN +LI+
Sbjct: 604 ERKNRTLKEMMNALLIN 620


>KZV31144.1 hypothetical protein F511_24590 [Dorcoceras hygrometricum]
          Length = 946

 Score = 64.3 bits (155), Expect(2) = 4e-09
 Identities = 28/52 (53%), Positives = 36/52 (69%)
 Frame = +3

Query: 330 GEACLSK*SIFNRVPHKRIDSLPCQLWKEHAPNLGYLKMWGCLAKVAIPEFK 485
           GEA LS   I N++P K+ D  P +LWK H P+  YLK+WGCLAKV +P+ K
Sbjct: 596 GEAILSANHILNKIPQKKKDKTPYELWKGHKPSYKYLKVWGCLAKVEVPKPK 647



 Score = 23.5 bits (49), Expect(2) = 4e-09
 Identities = 9/17 (52%), Positives = 15/17 (88%)
 Frame = +2

Query: 266 EKIDRTLKDIMNVMLIS 316
           E+ +RTLK++MN +LI+
Sbjct: 571 ERKNRTLKEMMNALLIN 587


>KZV23924.1 hypothetical protein F511_22499 [Dorcoceras hygrometricum]
          Length = 885

 Score = 64.3 bits (155), Expect(2) = 4e-09
 Identities = 28/52 (53%), Positives = 36/52 (69%)
 Frame = +3

Query: 330 GEACLSK*SIFNRVPHKRIDSLPCQLWKEHAPNLGYLKMWGCLAKVAIPEFK 485
           GEA LS   I N++P K+ D  P +LWK H P+  YLK+WGCLAKV +P+ K
Sbjct: 546 GEAILSANHILNKIPQKKKDKTPYELWKGHKPSYKYLKVWGCLAKVEVPKPK 597



 Score = 23.5 bits (49), Expect(2) = 4e-09
 Identities = 9/17 (52%), Positives = 15/17 (88%)
 Frame = +2

Query: 266 EKIDRTLKDIMNVMLIS 316
           E+ +RTLK++MN +LI+
Sbjct: 521 ERKNRTLKEMMNALLIN 537


>KYP72325.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 565

 Score = 63.9 bits (154), Expect = 6e-09
 Identities = 28/49 (57%), Positives = 33/49 (67%)
 Frame = +3

Query: 330 GEACLSK*SIFNRVPHKRIDSLPCQLWKEHAPNLGYLKMWGCLAKVAIP 476
           GEA  +   I NR+P+K  D  P +LWK   PNL YLK+WGCLAKV IP
Sbjct: 211 GEALFTACHILNRIPYKNSDKTPYELWKNRKPNLKYLKVWGCLAKVNIP 259


>KYP36589.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 655

 Score = 63.9 bits (154), Expect = 6e-09
 Identities = 27/52 (51%), Positives = 37/52 (71%)
 Frame = +3

Query: 330 GEACLSK*SIFNRVPHKRIDSLPCQLWKEHAPNLGYLKMWGCLAKVAIPEFK 485
           GEA L+   + NR+PH+R    P +LWK + PNL YL++WGCLAKV +P+ K
Sbjct: 16  GEALLTACFLQNRIPHRRTGKTPYELWKGYVPNLKYLRVWGCLAKVLLPDPK 67


>KYP33726.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 880

 Score = 63.9 bits (154), Expect = 7e-09
 Identities = 28/49 (57%), Positives = 33/49 (67%)
 Frame = +3

Query: 330 GEACLSK*SIFNRVPHKRIDSLPCQLWKEHAPNLGYLKMWGCLAKVAIP 476
           GEA  +   I NR+P+K  D  P +LWK   PNL YLK+WGCLAKV IP
Sbjct: 541 GEALFTACHILNRIPYKNSDKTPYELWKNRKPNLKYLKVWGCLAKVNIP 589


>KYP64289.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 1012

 Score = 63.9 bits (154), Expect = 7e-09
 Identities = 27/52 (51%), Positives = 37/52 (71%)
 Frame = +3

Query: 330 GEACLSK*SIFNRVPHKRIDSLPCQLWKEHAPNLGYLKMWGCLAKVAIPEFK 485
           GEA L+   + NR+PH+R    P +LWK + PNL YL++WGCLAKV +P+ K
Sbjct: 337 GEALLTACFLQNRIPHRRTGKTPYELWKGYVPNLKYLRVWGCLAKVLLPDPK 388


>KYP64290.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1215

 Score = 63.9 bits (154), Expect = 7e-09
 Identities = 27/52 (51%), Positives = 37/52 (71%)
 Frame = +3

Query: 330 GEACLSK*SIFNRVPHKRIDSLPCQLWKEHAPNLGYLKMWGCLAKVAIPEFK 485
           GEA L+   + NR+PH+R    P +LWK + PNL YL++WGCLAKV +P+ K
Sbjct: 562 GEALLTACFLQNRIPHRRTGKTPYELWKGYVPNLKYLRVWGCLAKVLLPDPK 613


>JAU38512.1 Copia protein, partial [Noccaea caerulescens]
          Length = 103

 Score = 59.7 bits (143), Expect = 9e-09
 Identities = 26/49 (53%), Positives = 33/49 (67%)
 Frame = +3

Query: 330 GEACLSK*SIFNRVPHKRIDSLPCQLWKEHAPNLGYLKMWGCLAKVAIP 476
           GEA L+   I N++PHK     P +LWK  AP+  YLK+WGCLAKV +P
Sbjct: 55  GEALLATNYILNKIPHKVTGKTPYELWKGSAPSYKYLKVWGCLAKVQVP 103


>CAN62130.1 hypothetical protein VITISV_019730 [Vitis vinifera]
          Length = 438

 Score = 61.2 bits (147), Expect(2) = 2e-08
 Identities = 28/52 (53%), Positives = 35/52 (67%)
 Frame = +3

Query: 330 GEACLSK*SIFNRVPHKRIDSLPCQLWKEHAPNLGYLKMWGCLAKVAIPEFK 485
           GE  LS   I N +P+KRI   P +LWK +APN+ YL++WGCLAKV   E K
Sbjct: 117 GETILSARHIQNTIPYKRIGKTPYELWKGYAPNIAYLRVWGCLAKVLFLEPK 168



 Score = 24.6 bits (52), Expect(2) = 2e-08
 Identities = 10/17 (58%), Positives = 15/17 (88%)
 Frame = +2

Query: 266 EKIDRTLKDIMNVMLIS 316
           E+ +RTLK++MN ML+S
Sbjct: 92  ERKNRTLKEMMNEMLVS 108


>CAN66637.1 hypothetical protein VITISV_011340 [Vitis vinifera]
          Length = 1316

 Score = 59.7 bits (143), Expect(2) = 2e-08
 Identities = 25/49 (51%), Positives = 34/49 (69%)
 Frame = +3

Query: 330 GEACLSK*SIFNRVPHKRIDSLPCQLWKEHAPNLGYLKMWGCLAKVAIP 476
           GEA L+   + N+VP K+ +  P +LWK   P+  YL+MWGCLAKVA+P
Sbjct: 657 GEAILTANYLLNKVPKKKAEKTPYELWKGRKPSYTYLRMWGCLAKVAVP 705



 Score = 25.8 bits (55), Expect(2) = 2e-08
 Identities = 11/17 (64%), Positives = 15/17 (88%)
 Frame = +2

Query: 266 EKIDRTLKDIMNVMLIS 316
           E+ +RTLK++MN MLIS
Sbjct: 632 ERKNRTLKEMMNAMLIS 648


>OMO89770.1 Integrase, catalytic core [Corchorus capsularis]
          Length = 1020

 Score = 60.1 bits (144), Expect(2) = 2e-08
 Identities = 25/52 (48%), Positives = 36/52 (69%)
 Frame = +3

Query: 330 GEACLSK*SIFNRVPHKRIDSLPCQLWKEHAPNLGYLKMWGCLAKVAIPEFK 485
           G+A LS   + NR+P+K+    P ++WK +APNL  LK+WGCLAK  +P+ K
Sbjct: 576 GKALLSTCHVQNRIPYKKTSKTPYEIWKGYAPNLKNLKVWGCLAKELLPDIK 627



 Score = 25.4 bits (54), Expect(2) = 2e-08
 Identities = 10/17 (58%), Positives = 15/17 (88%)
 Frame = +2

Query: 266 EKIDRTLKDIMNVMLIS 316
           E+ +RTLK++MN ML+S
Sbjct: 551 ERKNRTLKEMMNAMLVS 567


>AAT38766.2 Polyprotein, putative [Solanum demissum]
          Length = 1355

 Score = 61.2 bits (147), Expect(2) = 3e-08
 Identities = 26/49 (53%), Positives = 32/49 (65%)
 Frame = +3

Query: 330 GEACLSK*SIFNRVPHKRIDSLPCQLWKEHAPNLGYLKMWGCLAKVAIP 476
           GE  L+   I NRVP  +  S+P +LWK   PNL Y K+WGCLAKV +P
Sbjct: 664 GETILTANKILNRVPRSKTQSIPYELWKGRKPNLKYFKVWGCLAKVEVP 712



 Score = 23.9 bits (50), Expect(2) = 3e-08
 Identities = 9/17 (52%), Positives = 15/17 (88%)
 Frame = +2

Query: 266 EKIDRTLKDIMNVMLIS 316
           E+ +RTLK++MN ++IS
Sbjct: 639 ERKNRTLKEMMNALIIS 655


>OMO54671.1 Integrase, catalytic core [Corchorus capsularis]
          Length = 653

 Score = 59.3 bits (142), Expect(2) = 4e-08
 Identities = 27/52 (51%), Positives = 35/52 (67%)
 Frame = +3

Query: 330 GEACLSK*SIFNRVPHKRIDSLPCQLWKEHAPNLGYLKMWGCLAKVAIPEFK 485
           GEA LS   + NR+P+K+    P ++WK  APNL YLK  GCLAKV +P+ K
Sbjct: 323 GEALLSACHVQNRIPYKKTGKTPYEIWKGCAPNLKYLKCGGCLAKVLLPDIK 374



 Score = 25.4 bits (54), Expect(2) = 4e-08
 Identities = 10/17 (58%), Positives = 15/17 (88%)
 Frame = +2

Query: 266 EKIDRTLKDIMNVMLIS 316
           E+ +RTLK++MN ML+S
Sbjct: 298 ERKNRTLKEMMNAMLVS 314


>KYP49849.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 262

 Score = 60.5 bits (145), Expect = 6e-08
 Identities = 27/49 (55%), Positives = 33/49 (67%)
 Frame = +3

Query: 330 GEACLSK*SIFNRVPHKRIDSLPCQLWKEHAPNLGYLKMWGCLAKVAIP 476
           GEA  +   I NR+P+K +D  P +LWK   PNL YLK+W CLAKV IP
Sbjct: 173 GEALFTARHILNRIPYKILDKNPYELWKNRKPNLKYLKVWECLAKVNIP 221


>KYP31709.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 714

 Score = 60.8 bits (146), Expect(2) = 6e-08
 Identities = 27/49 (55%), Positives = 32/49 (65%)
 Frame = +3

Query: 330 GEACLSK*SIFNRVPHKRIDSLPCQLWKEHAPNLGYLKMWGCLAKVAIP 476
           GEA  +   I NR+P+K  D  P +LWK   PNL YLK+W CLAKV IP
Sbjct: 539 GEALFTACHILNRIPYKNSDKTPYELWKNRKPNLKYLKVWWCLAKVNIP 587



 Score = 23.1 bits (48), Expect(2) = 6e-08
 Identities = 10/17 (58%), Positives = 14/17 (82%)
 Frame = +2

Query: 266 EKIDRTLKDIMNVMLIS 316
           E+ +RTL D++N MLIS
Sbjct: 514 ERKNRTLLDMINAMLIS 530