BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00034500
         (391 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EEF44034.1 conserved hypothetical protein [Ricinus communis]          112   1e-26
CAN71465.1 hypothetical protein VITISV_038986 [Vitis vinifera]         90   2e-18
YP_009242020.1 NADH dehydrogenase subunit 4 (mitochondrion) [Ory...    84   3e-16
YP_009242008.1 NADH dehydrogenase subunit 4 (mitochondrion) [Ory...    83   5e-16
XP_013442822.1 NADH-quinone oxidoreductase protein [Medicago tru...    51   5e-07

>EEF44034.1 conserved hypothetical protein [Ricinus communis]
          Length = 431

 Score =  112 bits (279), Expect = 1e-26
 Identities = 52/59 (88%), Positives = 56/59 (94%)
 Frame = +2

Query: 77  SS*YVTSSRPRCIEEYLCTMFQFTDKEDRVGVGVYDVILKYDRGRYLLTMGRKQEPLCK 253
           SS Y+TSSRPRCIEEYLCTMF+FTDKEDRV VGVY+VILKYD GRY+LTMGRKQEPLCK
Sbjct: 373 SSKYITSSRPRCIEEYLCTMFRFTDKEDRVRVGVYNVILKYDPGRYMLTMGRKQEPLCK 431


>CAN71465.1 hypothetical protein VITISV_038986 [Vitis vinifera]
          Length = 564

 Score = 89.7 bits (221), Expect = 2e-18
 Identities = 41/43 (95%), Positives = 41/43 (95%)
 Frame = -2

Query: 147 VNWNIVHRYSSMQRGRDDVTYYDDVQKCCPSARQYGTSQQLPF 19
           VN NIVHRYSSMQRGRDDVTYYD VQKCCPSARQYGTSQQLPF
Sbjct: 342 VNRNIVHRYSSMQRGRDDVTYYDHVQKCCPSARQYGTSQQLPF 384



 Score = 46.6 bits (109), Expect(2) = 7e-07
 Identities = 20/23 (86%), Positives = 23/23 (100%)
 Frame = -1

Query: 391 RSTPITPRTVQDSYHLSYGFLTS 323
           RSTPITPRTVQDSYHLSYG+L++
Sbjct: 306 RSTPITPRTVQDSYHLSYGWLSN 328



 Score = 33.9 bits (76), Expect(2) = 7e-07
 Identities = 16/16 (100%), Positives = 16/16 (100%)
 Frame = -3

Query: 335 LSNFTSFSGRSALSID 288
           LSNFTSFSGRSALSID
Sbjct: 326 LSNFTSFSGRSALSID 341


>YP_009242020.1 NADH dehydrogenase subunit 4 (mitochondrion) [Oryza minuta]
            AMQ23374.1 NADH dehydrogenase subunit 4 (mitochondrion)
            [Oryza minuta]
          Length = 2992

 Score = 84.0 bits (206), Expect = 3e-16
 Identities = 54/107 (50%), Positives = 63/107 (58%), Gaps = 2/107 (1%)
 Frame = +3

Query: 15   IGTGAVERFHIAEPKGSTSVRHRSMSRRLVPAASKSTYALCSSSLIRKIESGWGSTM*Y* 194
            +  G+      AEPKG TSVRHR MS RLV AASKSTYALCS SLIRKIE GW STM Y 
Sbjct: 1758 LSRGSSSEVPYAEPKGRTSVRHRCMSPRLVLAASKSTYALCSGSLIRKIELGWRSTMRYY 1817

Query: 195  SMT--GGDTC*LWVESRNHYVNNFGGLQISYTTIDRQSGTTRKRSEV 329
            ++   GG    L  E+ +  +      +       RQSGTTRK  E+
Sbjct: 1818 TIVCPGGKDAQLKTEAGSVLLKMSEVTRSLRLPSIRQSGTTRKEVEL 1864



 Score = 58.9 bits (141), Expect = 2e-07
 Identities = 36/67 (53%), Positives = 45/67 (67%)
 Frame = +1

Query: 190  TKV*PGEIPANYG*KAGTIM*IISGGYRSLILPSIDRAERPEKEVKLESRMIGGNYLVRF 369
            T V PG   A    +AG+++  +S   RSL LPSI ++    KEV+LESRMIGG YLVRF
Sbjct: 1818 TIVCPGGKDAQLKTEAGSVLLKMSEVTRSLRLPSIRQSGTTRKEVELESRMIGGYYLVRF 1877

Query: 370  GG*SAYS 390
            GG +AYS
Sbjct: 1878 GGLAAYS 1884


>YP_009242008.1 NADH dehydrogenase subunit 4 (mitochondrion) [Oryza minuta]
            AMQ23370.1 NADH dehydrogenase subunit 4 (mitochondrion)
            [Oryza minuta]
          Length = 2992

 Score = 83.2 bits (204), Expect = 5e-16
 Identities = 54/107 (50%), Positives = 62/107 (57%), Gaps = 2/107 (1%)
 Frame = +3

Query: 15   IGTGAVERFHIAEPKGSTSVRHRSMSRRLVPAASKSTYALCSSSLIRKIESGWGSTM*Y* 194
            +  G+      AEPKG TSVRHR MS RLV AASKSTYALCS SLIRKIE GW STM Y 
Sbjct: 1758 LSRGSSSEVPYAEPKGRTSVRHRCMSPRLVLAASKSTYALCSGSLIRKIELGWRSTMSYY 1817

Query: 195  SMT--GGDTC*LWVESRNHYVNNFGGLQISYTTIDRQSGTTRKRSEV 329
             +   GG    L  E+ +  +      +       RQSGTTRK  E+
Sbjct: 1818 CIVCPGGKDAQLKTEAGSVLLKMSEVTRSLRLPSIRQSGTTRKEVEL 1864



 Score = 58.2 bits (139), Expect = 3e-07
 Identities = 34/63 (53%), Positives = 43/63 (68%)
 Frame = +1

Query: 202  PGEIPANYG*KAGTIM*IISGGYRSLILPSIDRAERPEKEVKLESRMIGGNYLVRFGG*S 381
            PG   A    +AG+++  +S   RSL LPSI ++    KEV+LESRMIGG YLVRFGG +
Sbjct: 1822 PGGKDAQLKTEAGSVLLKMSEVTRSLRLPSIRQSGTTRKEVELESRMIGGYYLVRFGGLA 1881

Query: 382  AYS 390
            AYS
Sbjct: 1882 AYS 1884


>XP_013442822.1 NADH-quinone oxidoreductase protein [Medicago truncatula]
           KEH16847.1 NADH-quinone oxidoreductase protein [Medicago
           truncatula]
          Length = 346

 Score = 50.8 bits (120), Expect(2) = 5e-07
 Identities = 24/27 (88%), Positives = 25/27 (92%)
 Frame = +3

Query: 18  GTGAVERFHIAEPKGSTSVRHRSMSRR 98
           GTGAV+RFHIAEPKGSTSVR RSMS R
Sbjct: 20  GTGAVDRFHIAEPKGSTSVRDRSMSSR 46



 Score = 30.0 bits (66), Expect(2) = 5e-07
 Identities = 11/14 (78%), Positives = 14/14 (100%)
 Frame = +2

Query: 95  SSRPRCIEEYLCTM 136
           SSRPRCIE+YLC++
Sbjct: 44  SSRPRCIEKYLCSI 57