BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00034282
         (1028 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YP_004429259.1 putative capsid protein [Fig cryptic virus] CBW77...   204   9e-60
KVI07717.1 Pseudouridine synthase, catalytic domain-containing p...   124   8e-28
ERM99970.1 hypothetical protein AMTR_s00110p00120920, partial [A...    62   6e-08

>YP_004429259.1 putative capsid protein [Fig cryptic virus] CBW77437.1 putative
           capsid protein [Fig cryptic virus]
          Length = 337

 Score =  204 bits (519), Expect = 9e-60
 Identities = 123/331 (37%), Positives = 172/331 (51%), Gaps = 49/331 (14%)
 Frame = +3

Query: 138 DPMEDLIAERKIRQVSRTTGFMIHESEIDFDQLYDNLVRNLQRIYAHWDPLITRYTGTRD 317
           D +EDLIA+ +++     T       ++DFD L++ +   +  IY +WD L   Y GT  
Sbjct: 7   DILEDLIADGRLQITPYVTSTEPKIFDVDFDALWNRINAIIVPIYTNWDQLRFHYPGTTT 66

Query: 318 EVIQEINGDVSSMVTFALWITYNRLRTVAERYSSHSRTQRMNHKAPCSNRMEFPAFLKST 497
            V   I  DV  +VTFALW  YNRLR+VAE +   +RT RMN +AP SNRMEFP+FL S 
Sbjct: 67  TVTNNITLDVGHLVTFALWQLYNRLRSVAECFHHPTRTSRMNTRAPISNRMEFPSFLSSM 126

Query: 498 LQSIGPLRILDSPHEIMLIYVPPANTANHYGRTQANNPIVGMHHRLLTHLHELNVQCSPI 677
           L+SI  LRI D P + + ++  P  T+N+YGR+    P  G + RL   L  L VQ +PI
Sbjct: 127 LESISWLRINDGPVDYLALFTAPTGTSNNYGRSTVQVPDNGCYDRLTGKLRALGVQLTPI 186

Query: 678 DLTPTQGSFATTCQFVLSEDLLSIVGSVHRSHYTNDDVRRFLLIA-------YPNIDDT- 833
           D+TP+ GSF  T Q +  E+L +IVG+ H SHY N+D  R + +A       +P+   T 
Sbjct: 187 DMTPSAGSFWPTTQVITEEELYNIVGTFHSSHYVNEDAIRAIFLAGTAHSQPFPDFGMTV 246

Query: 834 ----------PLPAVAAQGTTP-----------------------------AKPAGCYIL 896
                     PL A+AA   TP                               P+GCYI+
Sbjct: 247 GFVTDRTVMDPLAALAAPTGTPRSEEATSAGRPVHGMYNVNHRGIQPAAGEQNPSGCYII 306

Query: 897 GE--KPIFTVYLAQNLTAYDINSILRYHLTR 983
           G   +  +T YLA+ +  ++ N I+RY   R
Sbjct: 307 GRGYERRYTCYLARRIAVFEANRIIRYRFMR 337


>KVI07717.1 Pseudouridine synthase, catalytic domain-containing protein [Cynara
            cardunculus var. scolymus]
          Length = 882

 Score =  124 bits (312), Expect = 8e-28
 Identities = 102/337 (30%), Positives = 145/337 (43%), Gaps = 58/337 (17%)
 Frame = +3

Query: 132  ETDPMEDLIAERKIRQVSRTTGFMIHESEIDFDQLYDNLVRNLQRIYAHWDPLITRYT-G 308
            + DP  DL+A  +I      +  +    EID + L   +   L  +      L  RY  G
Sbjct: 533  KADPFLDLVASGRISVQPIHSYGLTTVVEIDLEHLATAMKDRLNLVLPFIPELCNRYNCG 592

Query: 309  TRDEVIQEINGDVSSMVTFALWITYNRLRTVAERYSSHSRTQRMNHKAPCSNRMEFPAFL 488
            +   +   I  DV+ MV  A+ +TYNRLR + E Y+      RMN ++P SNR  FPAF+
Sbjct: 593  SETSITDTIMADVNMMVDTAISVTYNRLRHILELYNPTVCNTRMNPRSPGSNRYRFPAFI 652

Query: 489  KSTLQSIGPLRILDSPHEIMLIYVPPANTANHYGRTQANNPIVGMHHRLLTHLHELNVQC 668
             S L SIGPLR++D P  ++++Y   AN +  YGR    N I G   RL+ +L  + V  
Sbjct: 653  ASVLGSIGPLRVMDGPEPMVIVYSTSANRSRTYGRAAPFNFIYGQFERLIDNLEAIGVPL 712

Query: 669  SPIDLTPTQ--GSFATTCQFVLSEDLLSIVGSVHRSHYTNDDVRR--FLLIAYPNI---D 827
            + ID+      GSF +T      + L   +   H SHY + D+    F L   P I   +
Sbjct: 713  ATIDVKAVDRGGSFFSTIVPTHHDGLWGFIAPFHHSHYKHKDIVNAWFTLHDDPTICAFE 772

Query: 828  DTPL-------PAV-----------------------------------------AAQGT 863
            D  L       PAV                                         AA+G 
Sbjct: 773  DCSLRIECCTDPAVVDAVNATGPENAPDDLDGAMARTQPVGGRFPVNVFGIRSAVAAKGA 832

Query: 864  TPAKPAGCYIL--GEKPIFTVYLAQNLTAYDINSILR 968
              A PA  YI+  G K  +   LA+NLT  ++ S+LR
Sbjct: 833  NAAVPAAVYIIGRGNKRYYCTSLARNLTQREMFSLLR 869


>ERM99970.1 hypothetical protein AMTR_s00110p00120920, partial [Amborella
           trichopoda]
          Length = 185

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 1/154 (0%)
 Frame = +3

Query: 141 PMEDLIAER-KIRQVSRTTGFMIHESEIDFDQLYDNLVRNLQRIYAHWDPLITRYTGTRD 317
           PMED++  + ++    R+    ++   IDF  LY  L+  L+      +PL         
Sbjct: 30  PMEDVLVRKGRLIPKPRSIWPKVNVLGIDFVHLYTVLLFWLESFLTSHEPLRKFCDRITY 89

Query: 318 EVIQEINGDVSSMVTFALWITYNRLRTVAERYSSHSRTQRMNHKAPCSNRMEFPAFLKST 497
           E+   I   + S++  +L   +N LR++AE     +R      KAP     E P F  + 
Sbjct: 90  EITTVIIDGIRSLLNQSLLELWNSLRSIAETNDHDTRNNIFARKAPTFKEFEMPRFYANL 149

Query: 498 LQSIGPLRILDSPHEIMLIYVPPANTANHYGRTQ 599
           L  IGPL I DS  + ++IY P     ++Y RT+
Sbjct: 150 LFGIGPLHIEDSLMDTIIIYAPAQERGDNYRRTK 183