BLASTX nr result

ID: Panax24_contig00034264 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00034264
         (506 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017256474.1 PREDICTED: mechanosensitive ion channel protein 1...    59   5e-07
KZM90456.1 hypothetical protein DCAR_022179 [Daucus carota subsp...    56   4e-06

>XP_017256474.1 PREDICTED: mechanosensitive ion channel protein 10-like [Daucus
           carota subsp. sativus]
          Length = 435

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 26/50 (52%), Positives = 37/50 (74%)
 Frame = +3

Query: 327 NEVEMFVDQILKNLKKNELREINEADLVQVMKEEDVADVLKLFEGAVERK 476
           ++VE  ++ + KNL  NELR+I E DL++VMK+ED+AD L+L EG  E K
Sbjct: 140 HQVEKVINMVYKNLTNNELRDIQETDLLRVMKKEDIADFLRLLEGPAETK 189


>KZM90456.1 hypothetical protein DCAR_022179 [Daucus carota subsp. sativus]
          Length = 381

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 30/60 (50%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
 Frame = +3

Query: 327 NEVEMFVDQILKNLKKNELREINEADLVQVMKEEDVADVLKLFEGAVERKFTV---LKNW 497
           ++VE  +  +L+NL  NE R+I EADL+ VMKEE+VA  L+LF GA E K      LK W
Sbjct: 93  HQVEHVISLVLRNLTNNEPRDIQEADLLLVMKEENVAKFLQLFHGATETKSITQESLKTW 152


Top