BLASTX nr result

ID: Panax24_contig00033976 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00033976
         (446 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017245996.1 PREDICTED: chromatin structure-remodeling complex...    57   1e-06
KZM99589.1 hypothetical protein DCAR_013049 [Daucus carota subsp...    57   1e-06
XP_017245995.1 PREDICTED: chromatin structure-remodeling complex...    57   1e-06
XP_017245992.1 PREDICTED: chromatin structure-remodeling complex...    57   1e-06

>XP_017245996.1 PREDICTED: chromatin structure-remodeling complex protein SYD isoform
            X3 [Daucus carota subsp. sativus]
          Length = 3131

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 53/169 (31%), Positives = 75/169 (44%), Gaps = 25/169 (14%)
 Frame = +3

Query: 15   SALSTLETMTLTQSLDNKTNSALSTLETDLDSDFVKVGSPSEKEGGEKVEAAVKLLLDGS 194
            SA+S +ET   T    + +N A STLET+  SD  KVGSP EKE   K+E    +    S
Sbjct: 2377 SAVSNMETCIATLDSGDTSNLASSTLETNQTSDAAKVGSPVEKECCGKLEEVPGVDTSES 2436

Query: 195  ---------VAPTPEV------------HKSESQRNAADCVLNVADPEIFIEERSFDDNG 311
                     +A T +             H SE   +A DC+++     +    RS +DN 
Sbjct: 2437 PKINSYVQDIAETDKFTQESLEGKDAIHHVSEKCGDAEDCMVHSTREAV----RSVEDNV 2492

Query: 312  K----SVEEKNSVMDQVASYAEDKPVAVNDAMVVIKESVNSYEEKVALD 446
            +     VE + S+   + S   D      DAM   KE++NSY+    LD
Sbjct: 2493 RVDDAVVENRESINSYLVSTTTD------DAMAETKETINSYQVSAPLD 2535


>KZM99589.1 hypothetical protein DCAR_013049 [Daucus carota subsp. sativus]
          Length = 3568

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 53/169 (31%), Positives = 75/169 (44%), Gaps = 25/169 (14%)
 Frame = +3

Query: 15   SALSTLETMTLTQSLDNKTNSALSTLETDLDSDFVKVGSPSEKEGGEKVEAAVKLLLDGS 194
            SA+S +ET   T    + +N A STLET+  SD  KVGSP EKE   K+E    +    S
Sbjct: 2307 SAVSNMETCIATLDSGDTSNLASSTLETNQTSDAAKVGSPVEKECCGKLEEVPGVDTSES 2366

Query: 195  ---------VAPTPEV------------HKSESQRNAADCVLNVADPEIFIEERSFDDNG 311
                     +A T +             H SE   +A DC+++     +    RS +DN 
Sbjct: 2367 PKINSYVQDIAETDKFTQESLEGKDAIHHVSEKCGDAEDCMVHSTREAV----RSVEDNV 2422

Query: 312  K----SVEEKNSVMDQVASYAEDKPVAVNDAMVVIKESVNSYEEKVALD 446
            +     VE + S+   + S   D      DAM   KE++NSY+    LD
Sbjct: 2423 RVDDAVVENRESINSYLVSTTTD------DAMAETKETINSYQVSAPLD 2465


>XP_017245995.1 PREDICTED: chromatin structure-remodeling complex protein SYD isoform
            X2 [Daucus carota subsp. sativus]
          Length = 3635

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 53/169 (31%), Positives = 75/169 (44%), Gaps = 25/169 (14%)
 Frame = +3

Query: 15   SALSTLETMTLTQSLDNKTNSALSTLETDLDSDFVKVGSPSEKEGGEKVEAAVKLLLDGS 194
            SA+S +ET   T    + +N A STLET+  SD  KVGSP EKE   K+E    +    S
Sbjct: 2377 SAVSNMETCIATLDSGDTSNLASSTLETNQTSDAAKVGSPVEKECCGKLEEVPGVDTSES 2436

Query: 195  ---------VAPTPEV------------HKSESQRNAADCVLNVADPEIFIEERSFDDNG 311
                     +A T +             H SE   +A DC+++     +    RS +DN 
Sbjct: 2437 PKINSYVQDIAETDKFTQESLEGKDAIHHVSEKCGDAEDCMVHSTREAV----RSVEDNV 2492

Query: 312  K----SVEEKNSVMDQVASYAEDKPVAVNDAMVVIKESVNSYEEKVALD 446
            +     VE + S+   + S   D      DAM   KE++NSY+    LD
Sbjct: 2493 RVDDAVVENRESINSYLVSTTTD------DAMAETKETINSYQVSAPLD 2535


>XP_017245992.1 PREDICTED: chromatin structure-remodeling complex protein SYD isoform
            X1 [Daucus carota subsp. sativus] XP_017245993.1
            PREDICTED: chromatin structure-remodeling complex protein
            SYD isoform X1 [Daucus carota subsp. sativus]
            XP_017245994.1 PREDICTED: chromatin structure-remodeling
            complex protein SYD isoform X1 [Daucus carota subsp.
            sativus]
          Length = 3638

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 53/169 (31%), Positives = 75/169 (44%), Gaps = 25/169 (14%)
 Frame = +3

Query: 15   SALSTLETMTLTQSLDNKTNSALSTLETDLDSDFVKVGSPSEKEGGEKVEAAVKLLLDGS 194
            SA+S +ET   T    + +N A STLET+  SD  KVGSP EKE   K+E    +    S
Sbjct: 2377 SAVSNMETCIATLDSGDTSNLASSTLETNQTSDAAKVGSPVEKECCGKLEEVPGVDTSES 2436

Query: 195  ---------VAPTPEV------------HKSESQRNAADCVLNVADPEIFIEERSFDDNG 311
                     +A T +             H SE   +A DC+++     +    RS +DN 
Sbjct: 2437 PKINSYVQDIAETDKFTQESLEGKDAIHHVSEKCGDAEDCMVHSTREAV----RSVEDNV 2492

Query: 312  K----SVEEKNSVMDQVASYAEDKPVAVNDAMVVIKESVNSYEEKVALD 446
            +     VE + S+   + S   D      DAM   KE++NSY+    LD
Sbjct: 2493 RVDDAVVENRESINSYLVSTTTD------DAMAETKETINSYQVSAPLD 2535


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