BLASTX nr result
ID: Panax24_contig00033250
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax24_contig00033250
(1733 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_017232532.1 PREDICTED: DNA-directed RNA polymerase IV subunit... 754 0.0
XP_017232529.1 PREDICTED: DNA-directed RNA polymerase IV subunit... 751 0.0
XP_017236034.1 PREDICTED: DNA-directed RNA polymerase IV subunit... 737 0.0
XP_017236029.1 PREDICTED: DNA-directed RNA polymerase IV subunit... 733 0.0
KZN07589.1 hypothetical protein DCAR_008426 [Daucus carota subsp... 706 0.0
KZN05928.1 hypothetical protein DCAR_006765 [Daucus carota subsp... 640 0.0
CDP09818.1 unnamed protein product [Coffea canephora] 618 0.0
XP_010661369.1 PREDICTED: DNA-directed RNA polymerase IV subunit... 606 0.0
XP_010661376.1 PREDICTED: DNA-directed RNA polymerase IV subunit... 600 0.0
XP_019156683.1 PREDICTED: DNA-directed RNA polymerase IV subunit... 601 0.0
XP_010661365.1 PREDICTED: DNA-directed RNA polymerase IV subunit... 600 0.0
XP_009797468.1 PREDICTED: DNA-directed RNA polymerase IV subunit... 592 0.0
XP_009593318.1 PREDICTED: DNA-directed RNA polymerase IV subunit... 589 0.0
XP_016440352.1 PREDICTED: DNA-directed RNA polymerase IV subunit... 589 0.0
XP_019231702.1 PREDICTED: DNA-directed RNA polymerase IV subunit... 594 0.0
XP_019156687.1 PREDICTED: DNA-directed RNA polymerase IV subunit... 593 0.0
XP_009797463.1 PREDICTED: DNA-directed RNA polymerase IV subunit... 592 0.0
XP_016472881.1 PREDICTED: DNA-directed RNA polymerase IV subunit... 591 0.0
XP_006358858.1 PREDICTED: DNA-directed RNA polymerase IV subunit... 589 0.0
XP_016440347.1 PREDICTED: DNA-directed RNA polymerase IV subunit... 589 0.0
>XP_017232532.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
[Daucus carota subsp. sativus]
Length = 1440
Score = 754 bits (1948), Expect = 0.0
Identities = 387/575 (67%), Positives = 449/575 (78%)
Frame = -3
Query: 1731 YNSKASSPNNNPDGSLNDSAYACAMGGQPVGXXXXXXXXXXXXXALDQPISALEASPLLN 1552
YN+ SS N+P+ L D A C MGGQPVG ALD PISALEASPLLN
Sbjct: 872 YNNPTSS-KNSPEEKLTDGA--CTMGGQPVGSWAACAISEAAYSALDLPISALEASPLLN 928
Query: 1551 LKEILECGGNKRNNTISLFLSKKLRRWAHGFEYGALEVKSHLERVQLLDIVSTVMIMFSP 1372
LKEILECG NK N T SLF SKKL RW +GFEY ALEVKS LER+Q LDIVSTVMIM+SP
Sbjct: 929 LKEILECGNNKVNKTASLFFSKKLERWTYGFEYAALEVKSRLERLQFLDIVSTVMIMYSP 988
Query: 1371 KTSRHTLPWVCHFHISKDMVKRKQIIVQSIIDALCMKCKSTQLKSKVYFPNLQITSKDCS 1192
+ PWVC FHI+K++ KRKQ+ VQSI+ AL MKC ST +KSKV P+LQIT D S
Sbjct: 989 CREAYVSPWVCQFHINKELAKRKQVKVQSIVKALYMKCNSTLVKSKVDLPDLQITCNDSS 1048
Query: 1191 EGNDATICITVSIVRSSKNSSIQLDTLKETVIPFLLGTVIKGSSNVKKVDILWKDPPNVS 1012
E N ATICI + +V +NSS QL+TL++ V+PFLL TVIKGSSNVKKVDILWKD ++S
Sbjct: 1049 EKNMATICINIRMVGIDENSSTQLETLEDMVLPFLLQTVIKGSSNVKKVDILWKDSSSLS 1108
Query: 1011 TSHKGSSGELYLRVFMSETCDRTRFWGVLMDDCLQLMDMIDWKRSHPEDIHAATLALGID 832
TSHKG+SGELY+RV MS TCDR+RFW VLM+DCLQ+MDMIDWKRS+P+DI AAT ALGID
Sbjct: 1109 TSHKGASGELYIRVHMSATCDRSRFWTVLMNDCLQIMDMIDWKRSYPDDIQAATSALGID 1168
Query: 831 VARKLFLSKLESAISDTGKTILPEHLLLVSDCLSSTGEYVALSANGLARQRKQTSVSSPF 652
A+ F++KL SAISDTGK +LPEHL LV+DCLS TGE+VALSANGLARQRKQTSVSSPF
Sbjct: 1169 FAKSQFINKLASAISDTGKAVLPEHLYLVADCLSCTGEFVALSANGLARQRKQTSVSSPF 1228
Query: 651 TQACFSSPADCFVNAAKMGIVDDLQGSLDALSWGNTPSLGTGGQFDILYSGKGHEPDKPE 472
TQACFSSPADCFVNA KMG++D+LQGSLD+L+WGN PSLGTG QFDILYS K HE KPE
Sbjct: 1229 TQACFSSPADCFVNAGKMGMMDNLQGSLDSLAWGNPPSLGTGAQFDILYSRKDHEVAKPE 1288
Query: 471 NIYNLLGSHINGHEQNVKLPDEGNSMSIKYLAKEGEILRKHFNANHFWWMSKKLKDILRN 292
+IYNLLGS + Q VK+ MSIK LAK ++LRK F A +F MS++L+ IL
Sbjct: 1289 DIYNLLGSQVGARGQRVKVSRTHTDMSIKNLAKRSDLLRKDFKAKYFLSMSEELRLILHK 1348
Query: 291 YDINQQLSDLDEKMVTVALYFHPRSIEKIGSGPQEIKIGLSSKGGNSRCFQLVRTDGSVE 112
Y INQQLS+LDE +V AL+FHPRS EKIGSG +EIKIG SSK SRCF +VRTDG++E
Sbjct: 1349 YKINQQLSELDESIVVAALFFHPRSSEKIGSGLKEIKIGGSSKSSTSRCFHVVRTDGTIE 1408
Query: 111 EFSYHKCIHHALELINPESAAEYQSLRSRWLNRRI 7
+FSYHKCIH+ L+LI P+SA Y RSRWLN R+
Sbjct: 1409 DFSYHKCIHNGLKLIAPKSAETY---RSRWLNGRV 1440
>XP_017232529.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
[Daucus carota subsp. sativus] XP_017232530.1 PREDICTED:
DNA-directed RNA polymerase IV subunit 1-like isoform X1
[Daucus carota subsp. sativus] XP_017232531.1 PREDICTED:
DNA-directed RNA polymerase IV subunit 1-like isoform X1
[Daucus carota subsp. sativus]
Length = 1441
Score = 751 bits (1938), Expect = 0.0
Identities = 387/576 (67%), Positives = 450/576 (78%), Gaps = 1/576 (0%)
Frame = -3
Query: 1731 YNSKASSPNNNPDGSLNDSAYACAMGGQPVGXXXXXXXXXXXXXALDQPISALEASPLLN 1552
YN+ SS N+P+ L D A C MGGQPVG ALD PISALEASPLLN
Sbjct: 872 YNNPTSS-KNSPEEKLTDGA--CTMGGQPVGSWAACAISEAAYSALDLPISALEASPLLN 928
Query: 1551 LKEILECGGNKRNNTISLFLSKKLRRWAHGFEYGALEVKSHLERVQLLDIVSTVMIMFSP 1372
LKEILECG NK N T SLF SKKL RW +GFEY ALEVKS LER+Q LDIVSTVMIM+SP
Sbjct: 929 LKEILECGNNKVNKTASLFFSKKLERWTYGFEYAALEVKSRLERLQFLDIVSTVMIMYSP 988
Query: 1371 KTSRHTLPWVCHFHISKDMVKRKQIIVQSIIDALCMKCKSTQLKSKVYFPNLQIT-SKDC 1195
+ PWVC FHI+K++ KRKQ+ VQSI+ AL MKC ST +KSKV P+LQIT + D
Sbjct: 989 CREAYVSPWVCQFHINKELAKRKQVKVQSIVKALYMKCNSTLVKSKVDLPDLQITCNSDS 1048
Query: 1194 SEGNDATICITVSIVRSSKNSSIQLDTLKETVIPFLLGTVIKGSSNVKKVDILWKDPPNV 1015
SE N ATICI + +V +NSS QL+TL++ V+PFLL TVIKGSSNVKKVDILWKD ++
Sbjct: 1049 SEKNMATICINIRMVGIDENSSTQLETLEDMVLPFLLQTVIKGSSNVKKVDILWKDSSSL 1108
Query: 1014 STSHKGSSGELYLRVFMSETCDRTRFWGVLMDDCLQLMDMIDWKRSHPEDIHAATLALGI 835
STSHKG+SGELY+RV MS TCDR+RFW VLM+DCLQ+MDMIDWKRS+P+DI AAT ALGI
Sbjct: 1109 STSHKGASGELYIRVHMSATCDRSRFWTVLMNDCLQIMDMIDWKRSYPDDIQAATSALGI 1168
Query: 834 DVARKLFLSKLESAISDTGKTILPEHLLLVSDCLSSTGEYVALSANGLARQRKQTSVSSP 655
D A+ F++KL SAISDTGK +LPEHL LV+DCLS TGE+VALSANGLARQRKQTSVSSP
Sbjct: 1169 DFAKSQFINKLASAISDTGKAVLPEHLYLVADCLSCTGEFVALSANGLARQRKQTSVSSP 1228
Query: 654 FTQACFSSPADCFVNAAKMGIVDDLQGSLDALSWGNTPSLGTGGQFDILYSGKGHEPDKP 475
FTQACFSSPADCFVNA KMG++D+LQGSLD+L+WGN PSLGTG QFDILYS K HE KP
Sbjct: 1229 FTQACFSSPADCFVNAGKMGMMDNLQGSLDSLAWGNPPSLGTGAQFDILYSRKDHEVAKP 1288
Query: 474 ENIYNLLGSHINGHEQNVKLPDEGNSMSIKYLAKEGEILRKHFNANHFWWMSKKLKDILR 295
E+IYNLLGS + Q VK+ MSIK LAK ++LRK F A +F MS++L+ IL
Sbjct: 1289 EDIYNLLGSQVGARGQRVKVSRTHTDMSIKNLAKRSDLLRKDFKAKYFLSMSEELRLILH 1348
Query: 294 NYDINQQLSDLDEKMVTVALYFHPRSIEKIGSGPQEIKIGLSSKGGNSRCFQLVRTDGSV 115
Y INQQLS+LDE +V AL+FHPRS EKIGSG +EIKIG SSK SRCF +VRTDG++
Sbjct: 1349 KYKINQQLSELDESIVVAALFFHPRSSEKIGSGLKEIKIGGSSKSSTSRCFHVVRTDGTI 1408
Query: 114 EEFSYHKCIHHALELINPESAAEYQSLRSRWLNRRI 7
E+FSYHKCIH+ L+LI P+SA Y RSRWLN R+
Sbjct: 1409 EDFSYHKCIHNGLKLIAPKSAETY---RSRWLNGRV 1441
>XP_017236034.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
[Daucus carota subsp. sativus]
Length = 1434
Score = 737 bits (1903), Expect = 0.0
Identities = 379/577 (65%), Positives = 445/577 (77%), Gaps = 2/577 (0%)
Frame = -3
Query: 1731 YNSKASSPNNNPDGSLNDSAYACAMGGQPVGXXXXXXXXXXXXXALDQPISALEASPLLN 1552
Y ++P N+ D +L D A C MGGQPVG ALDQPISA E SPLLN
Sbjct: 865 YGISTTAPENS-DETLTDGA--CTMGGQPVGSWAACAISEAAYSALDQPISAFEPSPLLN 921
Query: 1551 LKEILECGGNKRNNTISLFLSKKLRRWAHGFEYGALEVKSHLERVQLLDIVSTVMIMFSP 1372
LKEILECGGNK N T SLF SKKL RW +GFEY ALEVK+ LERVQ DIVSTVMIMFS
Sbjct: 922 LKEILECGGNKVNCTASLFFSKKLARWTYGFEYAALEVKNRLERVQFSDIVSTVMIMFSA 981
Query: 1371 KTSRHTL--PWVCHFHISKDMVKRKQIIVQSIIDALCMKCKSTQLKSKVYFPNLQITSKD 1198
+T + PWVCHFHI+K M RKQI VQS+IDAL MK ST++KS + P+L+ TS +
Sbjct: 982 ETCGQSRDSPWVCHFHINKVMATRKQIKVQSVIDALKMKWNSTRVKSNAHLPDLKFTSNE 1041
Query: 1197 CSEGNDATICITVSIVRSSKNSSIQLDTLKETVIPFLLGTVIKGSSNVKKVDILWKDPPN 1018
CSE N ++CI V IV S++NS QL+TL+ETVIP LL +VIKGSSNV KVDILWKD N
Sbjct: 1042 CSE-NITSVCINVRIVGSNRNSGPQLETLEETVIPLLLKSVIKGSSNVHKVDILWKDISN 1100
Query: 1017 VSTSHKGSSGELYLRVFMSETCDRTRFWGVLMDDCLQLMDMIDWKRSHPEDIHAATLALG 838
STS G SGELY+RVFMSETCDR+RFW VLM DCLQLMD+IDWKRS+PEDIHAA A G
Sbjct: 1101 KSTSQMGVSGELYVRVFMSETCDRSRFWAVLMGDCLQLMDLIDWKRSYPEDIHAAASAFG 1160
Query: 837 IDVARKLFLSKLESAISDTGKTILPEHLLLVSDCLSSTGEYVALSANGLARQRKQTSVSS 658
ID A+ FLSKL SA+SDTGK +LPEH +L++DCLS TGE+VALSA+GLARQRKQT+VSS
Sbjct: 1161 IDFAKTQFLSKLASALSDTGKAVLPEHSILIADCLSLTGEFVALSASGLARQRKQTAVSS 1220
Query: 657 PFTQACFSSPADCFVNAAKMGIVDDLQGSLDALSWGNTPSLGTGGQFDILYSGKGHEPDK 478
PFTQACFSSP+DCF+NA KMG +D LQGS+DAL+WGN+PSLGTG QFDILYSGKGHE DK
Sbjct: 1221 PFTQACFSSPSDCFINAGKMGSMDKLQGSIDALAWGNSPSLGTGAQFDILYSGKGHEVDK 1280
Query: 477 PENIYNLLGSHINGHEQNVKLPDEGNSMSIKYLAKEGEILRKHFNANHFWWMSKKLKDIL 298
P +IYNLLGS + EQ VK+P E +++SIK LAK+ + LRK+F A HF WMSK+L+ IL
Sbjct: 1281 PSDIYNLLGSGVGTQEQKVKVPREFSNISIKSLAKKSDFLRKNFKATHFLWMSKELRHIL 1340
Query: 297 RNYDINQQLSDLDEKMVTVALYFHPRSIEKIGSGPQEIKIGLSSKGGNSRCFQLVRTDGS 118
Y +NQQL +LDE + AL+FHPRS EKIG G Q IKIGLS KG S+CFQL+RTDG+
Sbjct: 1341 HKYKVNQQLIELDEAIAAAALFFHPRSSEKIGCGLQGIKIGLSLKGETSQCFQLIRTDGT 1400
Query: 117 VEEFSYHKCIHHALELINPESAAEYQSLRSRWLNRRI 7
+EEFSYHKCI +AL+ P SA Y+ S+WL R+
Sbjct: 1401 IEEFSYHKCILNALKQTAPRSAETYE---SKWLGERL 1434
>XP_017236029.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
[Daucus carota subsp. sativus] XP_017236030.1 PREDICTED:
DNA-directed RNA polymerase IV subunit 1-like isoform X1
[Daucus carota subsp. sativus] XP_017236031.1 PREDICTED:
DNA-directed RNA polymerase IV subunit 1-like isoform X1
[Daucus carota subsp. sativus] XP_017236032.1 PREDICTED:
DNA-directed RNA polymerase IV subunit 1-like isoform X1
[Daucus carota subsp. sativus] XP_017236033.1 PREDICTED:
DNA-directed RNA polymerase IV subunit 1-like isoform X1
[Daucus carota subsp. sativus]
Length = 1435
Score = 733 bits (1891), Expect = 0.0
Identities = 379/578 (65%), Positives = 445/578 (76%), Gaps = 3/578 (0%)
Frame = -3
Query: 1731 YNSKASSPNNNPDGSLNDSAYACAMGGQPVGXXXXXXXXXXXXXALDQPISALEASPLLN 1552
Y ++P N+ D +L D A C MGGQPVG ALDQPISA E SPLLN
Sbjct: 865 YGISTTAPENS-DETLTDGA--CTMGGQPVGSWAACAISEAAYSALDQPISAFEPSPLLN 921
Query: 1551 LKEILECGGNKRNNTISLFLSKKLRRWAHGFEYGALEVKSHLERVQLLDIVSTVMIMFSP 1372
LKEILECGGNK N T SLF SKKL RW +GFEY ALEVK+ LERVQ DIVSTVMIMFS
Sbjct: 922 LKEILECGGNKVNCTASLFFSKKLARWTYGFEYAALEVKNRLERVQFSDIVSTVMIMFSA 981
Query: 1371 KTSRHTL--PWVCHFHISKDMVKRKQIIVQSIIDALCMKCKSTQLKSKVYFPNLQITSK- 1201
+T + PWVCHFHI+K M RKQI VQS+IDAL MK ST++KS + P+L+ TS
Sbjct: 982 ETCGQSRDSPWVCHFHINKVMATRKQIKVQSVIDALKMKWNSTRVKSNAHLPDLKFTSNS 1041
Query: 1200 DCSEGNDATICITVSIVRSSKNSSIQLDTLKETVIPFLLGTVIKGSSNVKKVDILWKDPP 1021
+CSE N ++CI V IV S++NS QL+TL+ETVIP LL +VIKGSSNV KVDILWKD
Sbjct: 1042 ECSE-NITSVCINVRIVGSNRNSGPQLETLEETVIPLLLKSVIKGSSNVHKVDILWKDIS 1100
Query: 1020 NVSTSHKGSSGELYLRVFMSETCDRTRFWGVLMDDCLQLMDMIDWKRSHPEDIHAATLAL 841
N STS G SGELY+RVFMSETCDR+RFW VLM DCLQLMD+IDWKRS+PEDIHAA A
Sbjct: 1101 NKSTSQMGVSGELYVRVFMSETCDRSRFWAVLMGDCLQLMDLIDWKRSYPEDIHAAASAF 1160
Query: 840 GIDVARKLFLSKLESAISDTGKTILPEHLLLVSDCLSSTGEYVALSANGLARQRKQTSVS 661
GID A+ FLSKL SA+SDTGK +LPEH +L++DCLS TGE+VALSA+GLARQRKQT+VS
Sbjct: 1161 GIDFAKTQFLSKLASALSDTGKAVLPEHSILIADCLSLTGEFVALSASGLARQRKQTAVS 1220
Query: 660 SPFTQACFSSPADCFVNAAKMGIVDDLQGSLDALSWGNTPSLGTGGQFDILYSGKGHEPD 481
SPFTQACFSSP+DCF+NA KMG +D LQGS+DAL+WGN+PSLGTG QFDILYSGKGHE D
Sbjct: 1221 SPFTQACFSSPSDCFINAGKMGSMDKLQGSIDALAWGNSPSLGTGAQFDILYSGKGHEVD 1280
Query: 480 KPENIYNLLGSHINGHEQNVKLPDEGNSMSIKYLAKEGEILRKHFNANHFWWMSKKLKDI 301
KP +IYNLLGS + EQ VK+P E +++SIK LAK+ + LRK+F A HF WMSK+L+ I
Sbjct: 1281 KPSDIYNLLGSGVGTQEQKVKVPREFSNISIKSLAKKSDFLRKNFKATHFLWMSKELRHI 1340
Query: 300 LRNYDINQQLSDLDEKMVTVALYFHPRSIEKIGSGPQEIKIGLSSKGGNSRCFQLVRTDG 121
L Y +NQQL +LDE + AL+FHPRS EKIG G Q IKIGLS KG S+CFQL+RTDG
Sbjct: 1341 LHKYKVNQQLIELDEAIAAAALFFHPRSSEKIGCGLQGIKIGLSLKGETSQCFQLIRTDG 1400
Query: 120 SVEEFSYHKCIHHALELINPESAAEYQSLRSRWLNRRI 7
++EEFSYHKCI +AL+ P SA Y+ S+WL R+
Sbjct: 1401 TIEEFSYHKCILNALKQTAPRSAETYE---SKWLGERL 1435
>KZN07589.1 hypothetical protein DCAR_008426 [Daucus carota subsp. sativus]
Length = 1213
Score = 706 bits (1822), Expect = 0.0
Identities = 356/522 (68%), Positives = 418/522 (80%)
Frame = -3
Query: 1572 EASPLLNLKEILECGGNKRNNTISLFLSKKLRRWAHGFEYGALEVKSHLERVQLLDIVST 1393
+ SP L ++EILECG NK N T SLF SKKL RW +GFEY ALEVKS LER+Q LDIVST
Sbjct: 696 QKSPAL-IQEILECGNNKVNKTASLFFSKKLERWTYGFEYAALEVKSRLERLQFLDIVST 754
Query: 1392 VMIMFSPKTSRHTLPWVCHFHISKDMVKRKQIIVQSIIDALCMKCKSTQLKSKVYFPNLQ 1213
VMIM+SP + PWVC FHI+K++ KRKQ+ VQSI+ AL MKC ST +KSKV P+LQ
Sbjct: 755 VMIMYSPCREAYVSPWVCQFHINKELAKRKQVKVQSIVKALYMKCNSTLVKSKVDLPDLQ 814
Query: 1212 ITSKDCSEGNDATICITVSIVRSSKNSSIQLDTLKETVIPFLLGTVIKGSSNVKKVDILW 1033
IT D SE N ATICI + +V +NSS QL+TL++ V+PFLL TVIKGSSNVKKVDILW
Sbjct: 815 ITCNDSSEKNMATICINIRMVGIDENSSTQLETLEDMVLPFLLQTVIKGSSNVKKVDILW 874
Query: 1032 KDPPNVSTSHKGSSGELYLRVFMSETCDRTRFWGVLMDDCLQLMDMIDWKRSHPEDIHAA 853
KD ++STSHKG+SGELY+RV MS TCDR+RFW VLM+DCLQ+MDMIDWKRS+P+DI AA
Sbjct: 875 KDSSSLSTSHKGASGELYIRVHMSATCDRSRFWTVLMNDCLQIMDMIDWKRSYPDDIQAA 934
Query: 852 TLALGIDVARKLFLSKLESAISDTGKTILPEHLLLVSDCLSSTGEYVALSANGLARQRKQ 673
T ALGID A+ F++KL SAISDTGK +LPEHL LV+DCLS TGE+VALSANGLARQRKQ
Sbjct: 935 TSALGIDFAKSQFINKLASAISDTGKAVLPEHLYLVADCLSCTGEFVALSANGLARQRKQ 994
Query: 672 TSVSSPFTQACFSSPADCFVNAAKMGIVDDLQGSLDALSWGNTPSLGTGGQFDILYSGKG 493
TSVSSPFTQACFSSPADCFVNA KMG++D+LQGSLD+L+WGN PSLGTG QFDILYS K
Sbjct: 995 TSVSSPFTQACFSSPADCFVNAGKMGMMDNLQGSLDSLAWGNPPSLGTGAQFDILYSRKD 1054
Query: 492 HEPDKPENIYNLLGSHINGHEQNVKLPDEGNSMSIKYLAKEGEILRKHFNANHFWWMSKK 313
HE KPE+IYNLLGS + Q VK+ MSIK LAK ++LRK F A +F MS++
Sbjct: 1055 HEVAKPEDIYNLLGSQVGARGQRVKVSRTHTDMSIKNLAKRSDLLRKDFKAKYFLSMSEE 1114
Query: 312 LKDILRNYDINQQLSDLDEKMVTVALYFHPRSIEKIGSGPQEIKIGLSSKGGNSRCFQLV 133
L+ IL Y INQQLS+LDE +V AL+FHPRS EKIGSG +EIKIG SSK SRCF +V
Sbjct: 1115 LRLILHKYKINQQLSELDESIVVAALFFHPRSSEKIGSGLKEIKIGGSSKSSTSRCFHVV 1174
Query: 132 RTDGSVEEFSYHKCIHHALELINPESAAEYQSLRSRWLNRRI 7
RTDG++E+FSYHKCIH+ L+LI P+SA Y RSRWLN R+
Sbjct: 1175 RTDGTIEDFSYHKCIHNGLKLIAPKSAETY---RSRWLNGRV 1213
>KZN05928.1 hypothetical protein DCAR_006765 [Daucus carota subsp. sativus]
Length = 1396
Score = 640 bits (1652), Expect = 0.0
Identities = 341/577 (59%), Positives = 408/577 (70%), Gaps = 2/577 (0%)
Frame = -3
Query: 1731 YNSKASSPNNNPDGSLNDSAYACAMGGQPVGXXXXXXXXXXXXXALDQPISALEASPLLN 1552
Y ++P N+ D +L D A C MGGQPVG ALDQPISA E SPLLN
Sbjct: 865 YGISTTAPENS-DETLTDGA--CTMGGQPVGSWAACAISEAAYSALDQPISAFEPSPLLN 921
Query: 1551 LKEILECGGNKRNNTISLFLSKKLRRWAHGFEYGALEVKSHLERVQLLDIVSTVMIMFSP 1372
LK + + S L K L+ W FS
Sbjct: 922 LKAAM--------SQFSEQLKKVLKMW------------------------------FSA 943
Query: 1371 KTSRHTL--PWVCHFHISKDMVKRKQIIVQSIIDALCMKCKSTQLKSKVYFPNLQITSKD 1198
+T + PWVCHFHI+K M RKQI VQS+IDAL MK ST++KS + P+L+ TS +
Sbjct: 944 ETCGQSRDSPWVCHFHINKVMATRKQIKVQSVIDALKMKWNSTRVKSNAHLPDLKFTSNE 1003
Query: 1197 CSEGNDATICITVSIVRSSKNSSIQLDTLKETVIPFLLGTVIKGSSNVKKVDILWKDPPN 1018
CSE N ++CI V IV S++NS QL+TL+ETVIP LL +VIKGSSNV KVDILWKD N
Sbjct: 1004 CSE-NITSVCINVRIVGSNRNSGPQLETLEETVIPLLLKSVIKGSSNVHKVDILWKDISN 1062
Query: 1017 VSTSHKGSSGELYLRVFMSETCDRTRFWGVLMDDCLQLMDMIDWKRSHPEDIHAATLALG 838
STS G SGELY+RVFMSETCDR+RFW VLM DCLQLMD+IDWKRS+PEDIHAA A G
Sbjct: 1063 KSTSQMGVSGELYVRVFMSETCDRSRFWAVLMGDCLQLMDLIDWKRSYPEDIHAAASAFG 1122
Query: 837 IDVARKLFLSKLESAISDTGKTILPEHLLLVSDCLSSTGEYVALSANGLARQRKQTSVSS 658
ID A+ FLSKL SA+SDTGK +LPEH +L++DCLS TGE+VALSA+GLARQRKQT+VSS
Sbjct: 1123 IDFAKTQFLSKLASALSDTGKAVLPEHSILIADCLSLTGEFVALSASGLARQRKQTAVSS 1182
Query: 657 PFTQACFSSPADCFVNAAKMGIVDDLQGSLDALSWGNTPSLGTGGQFDILYSGKGHEPDK 478
PFTQACFSSP+DCF+NA KMG +D LQGS+DAL+WGN+PSLGTG QFDILYSGKGHE DK
Sbjct: 1183 PFTQACFSSPSDCFINAGKMGSMDKLQGSIDALAWGNSPSLGTGAQFDILYSGKGHEVDK 1242
Query: 477 PENIYNLLGSHINGHEQNVKLPDEGNSMSIKYLAKEGEILRKHFNANHFWWMSKKLKDIL 298
P +IYNLLGS + EQ VK+P E +++SIK LAK+ + LRK+F A HF WMSK+L+ IL
Sbjct: 1243 PSDIYNLLGSGVGTQEQKVKVPREFSNISIKSLAKKSDFLRKNFKATHFLWMSKELRHIL 1302
Query: 297 RNYDINQQLSDLDEKMVTVALYFHPRSIEKIGSGPQEIKIGLSSKGGNSRCFQLVRTDGS 118
Y +NQQL +LDE + AL+FHPRS EKIG G Q IKIGLS KG S+CFQL+RTDG+
Sbjct: 1303 HKYKVNQQLIELDEAIAAAALFFHPRSSEKIGCGLQGIKIGLSLKGETSQCFQLIRTDGT 1362
Query: 117 VEEFSYHKCIHHALELINPESAAEYQSLRSRWLNRRI 7
+EEFSYHKCI +AL+ P SA Y+ S+WL R+
Sbjct: 1363 IEEFSYHKCILNALKQTAPRSAETYE---SKWLGERL 1396
>CDP09818.1 unnamed protein product [Coffea canephora]
Length = 1511
Score = 618 bits (1593), Expect = 0.0
Identities = 334/597 (55%), Positives = 424/597 (71%), Gaps = 25/597 (4%)
Frame = -3
Query: 1731 YNSKAS-SPNNNPDGSLNDSAYACAMGGQPVGXXXXXXXXXXXXXALDQPISALEASPLL 1555
YNS+ + +P N D S +++ A +GG PVG ALD PISALE+SPLL
Sbjct: 902 YNSRDTLTPCNCNDESPSETISAYDVGGHPVGALAACAISEAAYSALDLPISALESSPLL 961
Query: 1554 NLKEILECGGNKRNN--TISLFLSKKLRRWAHGFEYGALEVKSHLERVQLLDIVSTVMIM 1381
NLK+IL+CG K + T S+FL KKL R +G EYGALEVK HLER+ L D+VS+ MI
Sbjct: 962 NLKKILDCGVKKSSGDKTASIFLCKKLGRQTYGLEYGALEVKDHLERLMLEDVVSSSMIS 1021
Query: 1380 FSP-KTSRHTL-PWVCHFHISKDMVKRKQIIVQSIIDALCMKCKSTQLKSKVYFPNLQIT 1207
+S K SR + PW+CHFHISK+++KRK++ VQSIIDAL M +S ++K K+ P+LQIT
Sbjct: 1022 YSKEKCSRSQISPWICHFHISKEIIKRKRLRVQSIIDALNMAWRSAKVKLKINLPDLQIT 1081
Query: 1206 SKDCS-----EGNDATICITVSIVRSSKNSSIQLDTLKETVIPFLLGTVIKGSSNVKKVD 1042
K CS D IC+TVSI+ SK SS++LD L+ V+PFLLGTVIKG KKVD
Sbjct: 1082 GKACSLALKQNEKDTKICLTVSILEKSKKSSLRLDILRNMVMPFLLGTVIKGFPEFKKVD 1141
Query: 1041 ILWKDPPNVSTSHKGSSGELYLRVFMSETCDRTRFWGVLMDDCLQLMDMIDWKRSHPEDI 862
I+WKD N S S KGS G +YLRVFMSE CDRT+FW VL+D+CL++ D+IDW+RSHP+DI
Sbjct: 1142 IMWKDCRNSSKSSKGSLGGVYLRVFMSEKCDRTKFWSVLVDNCLRIRDLIDWERSHPDDI 1201
Query: 861 HAATLALGIDVARKLFLSKLESAISDTGKTILPEHLLLVSDCLSSTGEYVALSANGLARQ 682
H A GID A FLS L SAISDTGKTILPEHL+L +DCLS+TGE+VAL+A GLA+Q
Sbjct: 1202 HDMAPAYGIDAAVNHFLSSLNSAISDTGKTILPEHLVLTADCLSATGEFVALNAKGLAQQ 1261
Query: 681 RKQTSVSSPFTQACFSSPADCFVNAAKMGIVDDLQGSLDALSWGNTPSLGTGGQFDILYS 502
RK+T+VSSPF QACFSSP DCFV AAK GIVD+LQG++DAL+WG PS+GTG +FDI+YS
Sbjct: 1262 RKETAVSSPFLQACFSSPGDCFVRAAKTGIVDNLQGTVDALAWGMVPSIGTGARFDIIYS 1321
Query: 501 GKGHEPDKPENIYNLLGSHINGHEQNVKLPDEGNSMSIKY----------LAKEG----- 367
GKGHEP K ++Y+LLGS +N ++Q VK P++ MS K LA +G
Sbjct: 1322 GKGHEPAKSIDVYDLLGSIVNLNQQ-VKFPNKDYEMSGKSIVQHLFAYDDLATKGCILPR 1380
Query: 366 EILRKHFNANHFWWMSKKLKDILRNYDINQQLSDLDEKMVTVALYFHPRSIEKIGSGPQE 187
+LR F+ +S LK +L YD++ QLS++D+ +V AL FHPRS EKIG G E
Sbjct: 1381 TLLRNFFSLKDIQKLSHSLKHMLNKYDVDCQLSEIDKTIVMAALSFHPRSSEKIGIGAHE 1440
Query: 186 IKIGLSSKGGNSRCFQLVRTDGSVEEFSYHKCIHHALELINPESAAEYQSLRSRWLN 16
IK+G S+ NSRCF LVR DG+V +FSYHKC+H+AL+LI P+ A +Y+ S+WLN
Sbjct: 1441 IKVGYHSEYDNSRCFVLVRKDGTVADFSYHKCVHNALQLIAPDWAKKYE---SKWLN 1494
>XP_010661369.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2 [Vitis
vinifera]
Length = 1458
Score = 606 bits (1563), Expect = 0.0
Identities = 322/592 (54%), Positives = 403/592 (68%), Gaps = 30/592 (5%)
Frame = -3
Query: 1704 NNPDGSLNDSAYACAMGGQPVGXXXXXXXXXXXXXALDQPISALEASPLLNLKEILECGG 1525
+ P +N+ A MGGQPVG ALDQPIS LE SPLLNLK +LECG
Sbjct: 868 STPSDGINEDTCAYDMGGQPVGSISACAISEAAYSALDQPISLLEPSPLLNLKRVLECGL 927
Query: 1524 NKR--NNTISLFLSKKLRRWAHGFEYGALEVKSHLERVQLLDIVSTVMIMFSPK--TSRH 1357
K + T+SLFLSKKL + HGFEYGALEVK+HLE++ DIVSTVMI+FSP+ + H
Sbjct: 928 RKSTADRTVSLFLSKKLEKRKHGFEYGALEVKNHLEKLLFSDIVSTVMIVFSPQNGSKTH 987
Query: 1356 TLPWVCHFHISKDMVKRKQIIVQSIIDALCMKCKSTQLKSKVYFPNLQITSKDC-----S 1192
PWVCHFH+ +++ K++ + SIIDAL MKC S + +SK+ P+LQITSKDC
Sbjct: 988 FSPWVCHFHVCEEIAKKRSLKPHSIIDALYMKCNSARAESKINLPDLQITSKDCFVDMEK 1047
Query: 1191 EGNDATICITVSIVRSSKNSSIQLDTLKETVIPFLLGTVIKGSSNVKKVDILWKDPPNVS 1012
E +D CITVSIV +SK S IQLDT+++ VIPFLLG V+KG +VKKVDILW D P+ S
Sbjct: 1048 EDSDC-FCITVSIV-NSKKSCIQLDTVRDLVIPFLLGAVVKGLLDVKKVDILWNDNPD-S 1104
Query: 1011 TSHKGSSGELYLRVFMSETCDRTRFWGVLMDDCLQLMDMIDWKRSHPEDIHAATLALGID 832
K SSG LYLRV++S C + FWGVLMD CLQ+MDMIDW+RSHP++IH + GID
Sbjct: 1105 DVLKSSSGRLYLRVYVSGDCGKKNFWGVLMDACLQIMDMIDWERSHPDNIHDIFVVYGID 1164
Query: 831 VARKLFLSKLESAISDTGKTILPEHLLLVSDCLSSTGEYVALSANGLARQRKQTSVSSPF 652
K FL+ L+SAISD GKT+LPEHLLLV+ CLS+TGE+V L+A G+ARQ++ TS+SSPF
Sbjct: 1165 AGWKYFLNSLKSAISDIGKTVLPEHLLLVASCLSATGEFVGLNAKGMARQKELTSISSPF 1224
Query: 651 TQACFSSPADCFVNAAKMGIVDDLQGSLDALSWGNTPSLGTGGQFDILYSGKGHEPDKPE 472
Q CFSSP CF+ A K + D+L GSLDAL+WG PS+G+GG FDILYS KGHE +PE
Sbjct: 1225 MQGCFSSPGSCFIKAGKRAVADNLHGSLDALAWGKIPSVGSGGHFDILYSAKGHELARPE 1284
Query: 471 NIYNLLGSHINGHEQNVKLP--------------------DEGNSMSIKYLAK-EGEILR 355
+IY LLGS + HEQN+K+ + S K L K +LR
Sbjct: 1285 DIYKLLGSQTSCHEQNLKVKVPITCYQTTTKCGAQLVYANGDSASKGCKSLEKISKSVLR 1344
Query: 354 KHFNANHFWWMSKKLKDILRNYDINQQLSDLDEKMVTVALYFHPRSIEKIGSGPQEIKIG 175
+ N +S++LK IL+ Y IN QLS++D+ + +ALYFHPR EKIG G Q IK+
Sbjct: 1345 SFLSLNDIQKLSRRLKFILQKYPINHQLSEIDKTTLMMALYFHPRRDEKIGPGAQNIKVR 1404
Query: 174 LSSKGGNSRCFQLVRTDGSVEEFSYHKCIHHALELINPESAAEYQSLRSRWL 19
SK N+RCF LVRTDG+ E+FSYHKC+H ALE+I+P A YQ SRWL
Sbjct: 1405 YHSKYHNTRCFSLVRTDGTEEDFSYHKCVHGALEIIDPRRARSYQ---SRWL 1453
>XP_010661376.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X3 [Vitis
vinifera]
Length = 1354
Score = 600 bits (1547), Expect = 0.0
Identities = 321/594 (54%), Positives = 403/594 (67%), Gaps = 32/594 (5%)
Frame = -3
Query: 1704 NNPDGSLNDSAYACAMGGQPVGXXXXXXXXXXXXXALDQPISALEASPLLNLKEILECGG 1525
+ P +N+ A MGGQPVG ALDQPIS LE SPLLNLK +LECG
Sbjct: 762 STPSDGINEDTCAYDMGGQPVGSISACAISEAAYSALDQPISLLEPSPLLNLKRVLECGL 821
Query: 1524 NKR--NNTISLFLSKKLRRWAHGFEYGALEVKSHLERVQLLDIVSTVMIMFSPK--TSRH 1357
K + T+SLFLSKKL + HGFEYGALEVK+HLE++ DIVSTVMI+FSP+ + H
Sbjct: 822 RKSTADRTVSLFLSKKLEKRKHGFEYGALEVKNHLEKLLFSDIVSTVMIVFSPQNGSKTH 881
Query: 1356 TLPWVCHFHISKDMVKRKQIIVQSIIDALCMKCKSTQLKSKVYFPNLQITS--KDC---- 1195
PWVCHFH+ +++ K++ + SIIDAL MKC S + +SK+ P+LQITS +DC
Sbjct: 882 FSPWVCHFHVCEEIAKKRSLKPHSIIDALYMKCNSARAESKINLPDLQITSNGRDCFVDM 941
Query: 1194 -SEGNDATICITVSIVRSSKNSSIQLDTLKETVIPFLLGTVIKGSSNVKKVDILWKDPPN 1018
E +D CITVSIV +SK S IQLDT+++ VIPFLLG V+KG +VKKVDILW D P+
Sbjct: 942 EKEDSDC-FCITVSIV-NSKKSCIQLDTVRDLVIPFLLGAVVKGLLDVKKVDILWNDNPD 999
Query: 1017 VSTSHKGSSGELYLRVFMSETCDRTRFWGVLMDDCLQLMDMIDWKRSHPEDIHAATLALG 838
S K SSG LYLRV++S C + FWGVLMD CLQ+MDMIDW+RSHP++IH + G
Sbjct: 1000 -SDVLKSSSGRLYLRVYVSGDCGKKNFWGVLMDACLQIMDMIDWERSHPDNIHDIFVVYG 1058
Query: 837 IDVARKLFLSKLESAISDTGKTILPEHLLLVSDCLSSTGEYVALSANGLARQRKQTSVSS 658
ID K FL+ L+SAISD GKT+LPEHLLLV+ CLS+TGE+V L+A G+ARQ++ TS+SS
Sbjct: 1059 IDAGWKYFLNSLKSAISDIGKTVLPEHLLLVASCLSATGEFVGLNAKGMARQKELTSISS 1118
Query: 657 PFTQACFSSPADCFVNAAKMGIVDDLQGSLDALSWGNTPSLGTGGQFDILYSGKGHEPDK 478
PF Q CFSSP CF+ A K + D+L GSLDAL+WG PS+G+GG FDILYS KGHE +
Sbjct: 1119 PFMQGCFSSPGSCFIKAGKRAVADNLHGSLDALAWGKIPSVGSGGHFDILYSAKGHELAR 1178
Query: 477 PENIYNLLGSHINGHEQNVKLP--------------------DEGNSMSIKYLAK-EGEI 361
PE+IY LLGS + HEQN+K+ + S K L K +
Sbjct: 1179 PEDIYKLLGSQTSCHEQNLKVKVPITCYQTTTKCGAQLVYANGDSASKGCKSLEKISKSV 1238
Query: 360 LRKHFNANHFWWMSKKLKDILRNYDINQQLSDLDEKMVTVALYFHPRSIEKIGSGPQEIK 181
LR + N +S++LK IL+ Y IN QLS++D+ + +ALYFHPR EKIG G Q IK
Sbjct: 1239 LRSFLSLNDIQKLSRRLKFILQKYPINHQLSEIDKTTLMMALYFHPRRDEKIGPGAQNIK 1298
Query: 180 IGLSSKGGNSRCFQLVRTDGSVEEFSYHKCIHHALELINPESAAEYQSLRSRWL 19
+ SK N+RCF LVRTDG+ E+FSYHKC+H ALE+I+P A YQ SRWL
Sbjct: 1299 VRYHSKYHNTRCFSLVRTDGTEEDFSYHKCVHGALEIIDPRRARSYQ---SRWL 1349
>XP_019156683.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
[Ipomoea nil] XP_019156684.1 PREDICTED: DNA-directed RNA
polymerase IV subunit 1 isoform X1 [Ipomoea nil]
XP_019156685.1 PREDICTED: DNA-directed RNA polymerase IV
subunit 1 isoform X1 [Ipomoea nil] XP_019156686.1
PREDICTED: DNA-directed RNA polymerase IV subunit 1
isoform X1 [Ipomoea nil]
Length = 1448
Score = 601 bits (1549), Expect = 0.0
Identities = 323/599 (53%), Positives = 414/599 (69%), Gaps = 27/599 (4%)
Frame = -3
Query: 1731 YNSKASSPNNNPDGSLNDSAYAC-AMGGQPVGXXXXXXXXXXXXXALDQPISALEASPLL 1555
Y+ + S P P+ ++ ++A A+GG PVG ALDQPISALE+SPLL
Sbjct: 851 YSREKSDPTIAPEDAVKSHSHASNAVGGHPVGSLAASAISEAAYSALDQPISALESSPLL 910
Query: 1554 NLKEILECGGNKRNN--TISLFLSKKLRRWAHGFEYGALEVKSHLERVQLLDIVSTVMIM 1381
NLK++LE G K + + S+FLSK L RWA+GFEYGALEVK+HLER+ D+VS VMI
Sbjct: 911 NLKKVLESGVRKSSGEKSASMFLSKMLGRWAYGFEYGALEVKNHLERLLFSDLVSEVMIC 970
Query: 1380 FSPKTSR--HTLPWVCHFHISKDMVKRKQIIVQSIIDALCMKCKSTQLKSKVYFPNLQIT 1207
FS +TSR T PWVCHFHI+K++ KR+++ ++SI DAL M +T++K+KV PNLQIT
Sbjct: 971 FSRETSRSSRTSPWVCHFHINKEIAKRRRLKLESITDALNMSYTATKVKAKVELPNLQIT 1030
Query: 1206 SKDC----SEGNDATICITVSIVRSSKNSSIQLDTLKETVIPFLLGTVIKGSSNVKKVDI 1039
DC + D CITV+IV +K+S +LD L++ VIPFLL TV+KG S KKVDI
Sbjct: 1031 CTDCCVADTSKQDPKSCITVAIVGITKDSYPELDILRDFVIPFLLRTVVKGFSAFKKVDI 1090
Query: 1038 LWKDP-PNVSTSHKGSSGELYLRVFMSETCDRTRFWGVLMDDCLQLMDMIDWKRSHPEDI 862
LW++ P +S S SSGELYLRV MSE CDRT+FW VL+D CLQ+M MIDW+RSHP+DI
Sbjct: 1091 LWREEAPILSKSSIRSSGELYLRVLMSENCDRTKFWSVLVDSCLQIMTMIDWERSHPDDI 1150
Query: 861 HAATLALGIDVARKLFLSKLESAISDTGKTILPEHLLLVSDCLSSTGEYVALSANGLARQ 682
H ++A GIDVA K FL L SA+SDTGK ILPEHL+L +DCLSS+G+++ALSA GL+ Q
Sbjct: 1151 HDISVAYGIDVAWKCFLRDLSSAVSDTGKIILPEHLVLATDCLSSSGQFLALSAKGLSFQ 1210
Query: 681 RKQTSVSSPFTQACFSSPADCFVNAAKMGIVDDLQGSLDALSWGNTPSLGTGGQFDILYS 502
RK+ VS+PFTQACFSSP + F+ AAKMG+ DDL+G+ +ALSWG P +GTG QFD+LYS
Sbjct: 1211 RKENGVSTPFTQACFSSPGESFLKAAKMGLSDDLRGTAEALSWGKIPPVGTGFQFDVLYS 1270
Query: 501 GKGHEPDKPENIYNLLGSHINGHEQNVKL-PDEGNSMSIKYLAK----------EGE--- 364
GKG EP + ++YNLLG H ++ + L P+E + K LA+ EGE
Sbjct: 1271 GKGFEPSETTDVYNLLGKHAALQKEKMMLYPEESKEIVSKPLAQRLCKYGDFYSEGENSL 1330
Query: 363 ---ILRKHFNANHFWWMSKKLKDILRNYDINQQLSDLDEKMVTVALYFHPRSIEKIGSGP 193
+ F N +SK L++IL YDIN L + D+ +V ALYFHPR EKIG+G
Sbjct: 1331 LPKAISSSFTLNDIQRLSKALRNILYTYDINDHLKEADKSVVMRALYFHPRRSEKIGTGA 1390
Query: 192 QEIKIGLSSKGGNSRCFQLVRTDGSVEEFSYHKCIHHALELINPESAAEYQSLRSRWLN 16
EIK+G NSRCF LVR+DG+VE+FSYHKC+HHAL+LI P+ A Y SRWLN
Sbjct: 1391 HEIKVGQHKGHANSRCFLLVRSDGTVEDFSYHKCVHHALKLIAPKKAKTY---HSRWLN 1446
>XP_010661365.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1 [Vitis
vinifera]
Length = 1460
Score = 600 bits (1547), Expect = 0.0
Identities = 321/594 (54%), Positives = 403/594 (67%), Gaps = 32/594 (5%)
Frame = -3
Query: 1704 NNPDGSLNDSAYACAMGGQPVGXXXXXXXXXXXXXALDQPISALEASPLLNLKEILECGG 1525
+ P +N+ A MGGQPVG ALDQPIS LE SPLLNLK +LECG
Sbjct: 868 STPSDGINEDTCAYDMGGQPVGSISACAISEAAYSALDQPISLLEPSPLLNLKRVLECGL 927
Query: 1524 NKR--NNTISLFLSKKLRRWAHGFEYGALEVKSHLERVQLLDIVSTVMIMFSPK--TSRH 1357
K + T+SLFLSKKL + HGFEYGALEVK+HLE++ DIVSTVMI+FSP+ + H
Sbjct: 928 RKSTADRTVSLFLSKKLEKRKHGFEYGALEVKNHLEKLLFSDIVSTVMIVFSPQNGSKTH 987
Query: 1356 TLPWVCHFHISKDMVKRKQIIVQSIIDALCMKCKSTQLKSKVYFPNLQITS--KDC---- 1195
PWVCHFH+ +++ K++ + SIIDAL MKC S + +SK+ P+LQITS +DC
Sbjct: 988 FSPWVCHFHVCEEIAKKRSLKPHSIIDALYMKCNSARAESKINLPDLQITSNGRDCFVDM 1047
Query: 1194 -SEGNDATICITVSIVRSSKNSSIQLDTLKETVIPFLLGTVIKGSSNVKKVDILWKDPPN 1018
E +D CITVSIV +SK S IQLDT+++ VIPFLLG V+KG +VKKVDILW D P+
Sbjct: 1048 EKEDSDC-FCITVSIV-NSKKSCIQLDTVRDLVIPFLLGAVVKGLLDVKKVDILWNDNPD 1105
Query: 1017 VSTSHKGSSGELYLRVFMSETCDRTRFWGVLMDDCLQLMDMIDWKRSHPEDIHAATLALG 838
S K SSG LYLRV++S C + FWGVLMD CLQ+MDMIDW+RSHP++IH + G
Sbjct: 1106 -SDVLKSSSGRLYLRVYVSGDCGKKNFWGVLMDACLQIMDMIDWERSHPDNIHDIFVVYG 1164
Query: 837 IDVARKLFLSKLESAISDTGKTILPEHLLLVSDCLSSTGEYVALSANGLARQRKQTSVSS 658
ID K FL+ L+SAISD GKT+LPEHLLLV+ CLS+TGE+V L+A G+ARQ++ TS+SS
Sbjct: 1165 IDAGWKYFLNSLKSAISDIGKTVLPEHLLLVASCLSATGEFVGLNAKGMARQKELTSISS 1224
Query: 657 PFTQACFSSPADCFVNAAKMGIVDDLQGSLDALSWGNTPSLGTGGQFDILYSGKGHEPDK 478
PF Q CFSSP CF+ A K + D+L GSLDAL+WG PS+G+GG FDILYS KGHE +
Sbjct: 1225 PFMQGCFSSPGSCFIKAGKRAVADNLHGSLDALAWGKIPSVGSGGHFDILYSAKGHELAR 1284
Query: 477 PENIYNLLGSHINGHEQNVKLP--------------------DEGNSMSIKYLAK-EGEI 361
PE+IY LLGS + HEQN+K+ + S K L K +
Sbjct: 1285 PEDIYKLLGSQTSCHEQNLKVKVPITCYQTTTKCGAQLVYANGDSASKGCKSLEKISKSV 1344
Query: 360 LRKHFNANHFWWMSKKLKDILRNYDINQQLSDLDEKMVTVALYFHPRSIEKIGSGPQEIK 181
LR + N +S++LK IL+ Y IN QLS++D+ + +ALYFHPR EKIG G Q IK
Sbjct: 1345 LRSFLSLNDIQKLSRRLKFILQKYPINHQLSEIDKTTLMMALYFHPRRDEKIGPGAQNIK 1404
Query: 180 IGLSSKGGNSRCFQLVRTDGSVEEFSYHKCIHHALELINPESAAEYQSLRSRWL 19
+ SK N+RCF LVRTDG+ E+FSYHKC+H ALE+I+P A YQ SRWL
Sbjct: 1405 VRYHSKYHNTRCFSLVRTDGTEEDFSYHKCVHGALEIIDPRRARSYQ---SRWL 1455
>XP_009797468.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2
[Nicotiana sylvestris]
Length = 1254
Score = 592 bits (1525), Expect = 0.0
Identities = 312/575 (54%), Positives = 399/575 (69%), Gaps = 26/575 (4%)
Frame = -3
Query: 1662 AMGGQPVGXXXXXXXXXXXXXALDQPISALEASPLLNLKEILECG--GNKRNNTISLFLS 1489
A+GG PVG ALD PI ALE SPLLNLK+ILE G N T SLFLS
Sbjct: 669 AIGGHPVGSLAACAISEAAYSALDLPIGALEPSPLLNLKKILEAGVKSNSSEKTASLFLS 728
Query: 1488 KKLRRWAHGFEYGALEVKSHLERVQLLDIVSTVMIMFSPKT--SRHTLPWVCHFHISKDM 1315
K+L RWAHGFEYGALEVK HLER+ L DIVSTVMI FSP T S H+ PWVCHFHI K+
Sbjct: 729 KRLGRWAHGFEYGALEVKGHLERLLLSDIVSTVMICFSPGTYKSTHSSPWVCHFHIDKEY 788
Query: 1314 VKRKQIIVQSIIDALCMKCKSTQLKSKVYFPNLQITSKDCSEGN----DATICITVSIVR 1147
VK +++ ++S+IDAL M+ +ST++++ + P+L IT KDCS ++ ICI V++V
Sbjct: 789 VKTRRLKLKSVIDALNMRYRSTRMEAGIDLPSLHITCKDCSVAEMQKANSKICIAVAVVE 848
Query: 1146 SSKNSSIQLDTLKETVIPFLLGTVIKGSSNVKKVDILWKDPPNVSTSHKGSSGELYLRVF 967
+SK+S LDTL++ VIPFLL TVIKG S KKVDILW++ P+ S S +GS+GELYL+VF
Sbjct: 849 TSKDSFSLLDTLRDLVIPFLLETVIKGFSAFKKVDILWRELPSTSKSSRGSTGELYLQVF 908
Query: 966 MSETCDRTRFWGVLMDDCLQLMDMIDWKRSHPEDIHAATLALGIDVARKLFLSKLESAIS 787
MSE+CDR FW L+D CL +MD+IDW+ SHP+++H T+A G+DVA K FL L SA+S
Sbjct: 909 MSESCDRNNFWNALVDSCLHIMDLIDWEWSHPDNVHDLTVAYGVDVAWKYFLRNLNSAVS 968
Query: 786 DTGKTILPEHLLLVSDCLSSTGEYVALSANGLARQRKQTSVSSPFTQACFSSPADCFVNA 607
+TGK ILPEHL+L +DCL++TGE+V L+ GLA+QRK V SPF QACFS P D FV A
Sbjct: 969 ETGKKILPEHLVLAADCLTATGEFVPLNTKGLAQQRKCAGVISPFMQACFSHPGDSFVRA 1028
Query: 606 AKMGIVDDLQGSLDALSWGNTPSLGTGGQFDILYSGKGHEPDKPENIYNLLGSHINGHEQ 427
AK + DDLQGSL+AL+WG TPS GTG FDI+YSGKG+EP P ++Y LLG+H+ ++Q
Sbjct: 1029 AKTELSDDLQGSLEALAWGKTPSTGTGFSFDIIYSGKGYEPAAPTDVYALLGNHVTSNKQ 1088
Query: 426 NVKLP-DEGNSMSIKYLAK---------------EGEI--LRKHFNANHFWWMSKKLKDI 301
VK+ DE N + K LA+ + I LR + N +S+ LK +
Sbjct: 1089 QVKVTLDEDNETADKALARRLCKLDDLNTKRCKSQWSIANLRSFLSFNDIKKLSQALKQM 1148
Query: 300 LRNYDINQQLSDLDEKMVTVALYFHPRSIEKIGSGPQEIKIGLSSKGGNSRCFQLVRTDG 121
L Y I+++LS+ D+ +V +AL+FHPR EKIG G EIKIG + +SRCF LVRTDG
Sbjct: 1149 LSKYAIDRELSEADKSIVMMALHFHPRRSEKIGKGAMEIKIGYHKEYEDSRCFMLVRTDG 1208
Query: 120 SVEEFSYHKCIHHALELINPESAAEYQSLRSRWLN 16
+VE+FSY KC+ HALELI P+ A Y +WLN
Sbjct: 1209 TVEDFSYRKCLQHALELIAPQKAKTY-----KWLN 1238
>XP_009593318.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2
[Nicotiana tomentosiformis]
Length = 1211
Score = 589 bits (1518), Expect = 0.0
Identities = 308/575 (53%), Positives = 400/575 (69%), Gaps = 26/575 (4%)
Frame = -3
Query: 1662 AMGGQPVGXXXXXXXXXXXXXALDQPISALEASPLLNLKEILECG--GNKRNNTISLFLS 1489
A+GG PVG ALD P+ ALE SPLLNLK+ILE G N T +LFLS
Sbjct: 626 AIGGHPVGSLAACAISEAAYSALDLPVGALEPSPLLNLKKILEAGVKSNSSEKTATLFLS 685
Query: 1488 KKLRRWAHGFEYGALEVKSHLERVQLLDIVSTVMIMFSPKT--SRHTLPWVCHFHISKDM 1315
++L RWAHGFEYGA+EVK HLER+ L DIVSTVMI FSP+T S H+ PWVCHFHI K+
Sbjct: 686 RRLGRWAHGFEYGAIEVKGHLERLLLSDIVSTVMICFSPETCKSTHSSPWVCHFHIDKEY 745
Query: 1314 VKRKQIIVQSIIDALCMKCKSTQLKSKVYFPNLQITSKDCSEGN----DATICITVSIVR 1147
VK +++ ++S+IDAL M+ +ST++++ + P+L IT KDCS ++ ICITV++V
Sbjct: 746 VKTRRLKLKSVIDALNMRYRSTRMEAGIDLPSLHITCKDCSAAEMQKANSKICITVAVVE 805
Query: 1146 SSKNSSIQLDTLKETVIPFLLGTVIKGSSNVKKVDILWKDPPNVSTSHKGSSGELYLRVF 967
+SK+S LDTL++ VIPFLL TVIKG S KKVDILW++ P+ S S +GS+GELYL+VF
Sbjct: 806 TSKDSFSLLDTLRDLVIPFLLETVIKGFSAFKKVDILWRELPSTSKSSRGSTGELYLQVF 865
Query: 966 MSETCDRTRFWGVLMDDCLQLMDMIDWKRSHPEDIHAATLALGIDVARKLFLSKLESAIS 787
MSE+CDR FW L+D CL +MD+IDW++SHP+++H T+A G+DVA K FL L SA+S
Sbjct: 866 MSESCDRNNFWNALVDSCLHIMDLIDWEQSHPDNVHDLTVAYGVDVAWKYFLRNLNSAVS 925
Query: 786 DTGKTILPEHLLLVSDCLSSTGEYVALSANGLARQRKQTSVSSPFTQACFSSPADCFVNA 607
+TGK IL EHL+L +DCL++TGE+V L+ GLA+QRK V SPF QACFS P D FV A
Sbjct: 926 ETGKKILLEHLVLAADCLTATGEFVPLNTKGLAQQRKCAGVISPFMQACFSHPGDSFVRA 985
Query: 606 AKMGIVDDLQGSLDALSWGNTPSLGTGGQFDILYSGKGHEPDKPENIYNLLGSHINGHEQ 427
AK + DDLQGSL+AL+WG TPS GTG FDI+YSGKG+EP P ++Y LLG+H+ + Q
Sbjct: 986 AKTELSDDLQGSLEALAWGKTPSTGTGFSFDIIYSGKGYEPAAPTDVYALLGNHVTSNRQ 1045
Query: 426 NVKLP-DEGNSMSIKYLAK---------------EGEI--LRKHFNANHFWWMSKKLKDI 301
VK+ DE N + K LA+ + I LR + N +S+ LK +
Sbjct: 1046 QVKVTLDEDNETADKALARRLCKLDDLNTKRCKSQWSIANLRSFLSFNDIKKLSQALKQM 1105
Query: 300 LRNYDINQQLSDLDEKMVTVALYFHPRSIEKIGSGPQEIKIGLSSKGGNSRCFQLVRTDG 121
L Y I+++LS+ D+ +V +AL+FHPR EKIG G EIKIG + +SRCF LVRTDG
Sbjct: 1106 LSKYAIDRELSEADKSIVMMALHFHPRRSEKIGKGAMEIKIGYHKEYEDSRCFMLVRTDG 1165
Query: 120 SVEEFSYHKCIHHALELINPESAAEYQSLRSRWLN 16
+VE+FSY KC+ HALELI P+ A Y +WLN
Sbjct: 1166 TVEDFSYRKCLQHALELIAPQKAKTY-----KWLN 1195
>XP_016440352.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
[Nicotiana tabacum]
Length = 1254
Score = 589 bits (1519), Expect = 0.0
Identities = 308/575 (53%), Positives = 399/575 (69%), Gaps = 26/575 (4%)
Frame = -3
Query: 1662 AMGGQPVGXXXXXXXXXXXXXALDQPISALEASPLLNLKEILECG--GNKRNNTISLFLS 1489
A+GG PVG ALD P+ ALE SPLLNLK+ILE G N T +LFLS
Sbjct: 669 AIGGHPVGSLAACAISEAAYSALDLPVGALEPSPLLNLKKILEAGVKSNSSEKTATLFLS 728
Query: 1488 KKLRRWAHGFEYGALEVKSHLERVQLLDIVSTVMIMFSPKT--SRHTLPWVCHFHISKDM 1315
++L RWAHGFEYGA+EVK HLER+ L DIVSTVMI FSP+T S H+ PWVCHFHI K+
Sbjct: 729 RRLGRWAHGFEYGAIEVKGHLERLLLSDIVSTVMICFSPETCKSTHSSPWVCHFHIDKEY 788
Query: 1314 VKRKQIIVQSIIDALCMKCKSTQLKSKVYFPNLQITSKDCSEGN----DATICITVSIVR 1147
VK +++ ++S+IDAL M+ +ST++++ + P+L IT KDCS ++ ICI V++V
Sbjct: 789 VKTRRLKLKSVIDALNMRYRSTRMEAGIDLPSLHITCKDCSAAEMQKANSKICIAVAVVE 848
Query: 1146 SSKNSSIQLDTLKETVIPFLLGTVIKGSSNVKKVDILWKDPPNVSTSHKGSSGELYLRVF 967
+SK+S LDTL++ VIPFLL TVIKG S KKVDILW++ P+ S S +GS+GELYL+VF
Sbjct: 849 TSKDSFSLLDTLRDLVIPFLLETVIKGFSAFKKVDILWRELPSTSKSSRGSTGELYLQVF 908
Query: 966 MSETCDRTRFWGVLMDDCLQLMDMIDWKRSHPEDIHAATLALGIDVARKLFLSKLESAIS 787
MSE+CDR FW L+D CL +MD+IDW+RSHP+++H T+A G+DVA K FL L SA+S
Sbjct: 909 MSESCDRNNFWNALVDSCLHIMDLIDWERSHPDNVHDLTVAYGVDVAWKYFLRNLNSAVS 968
Query: 786 DTGKTILPEHLLLVSDCLSSTGEYVALSANGLARQRKQTSVSSPFTQACFSSPADCFVNA 607
+TGK ILPEHL+L +DCL++TGE+V L+ GLA+QRK V SPF QACFS P D FV A
Sbjct: 969 ETGKKILPEHLVLAADCLTATGEFVPLNTKGLAQQRKCAGVISPFMQACFSHPGDSFVRA 1028
Query: 606 AKMGIVDDLQGSLDALSWGNTPSLGTGGQFDILYSGKGHEPDKPENIYNLLGSHINGHEQ 427
AK + DDLQGSL+AL+WG TPS GTG FDI+YS KG+EP P ++Y LLG+H+ + Q
Sbjct: 1029 AKTELSDDLQGSLEALAWGKTPSTGTGFSFDIIYSEKGYEPAAPTDVYALLGNHVTSNRQ 1088
Query: 426 NVKLP-DEGNSMSIKYLAK---------------EGEI--LRKHFNANHFWWMSKKLKDI 301
VK+ DE N + K LA+ + I LR + N +S+ LK +
Sbjct: 1089 KVKVTLDEDNETADKALARRLCKLDDLNTKRCKSQWSIANLRSFLSFNDIKKLSQALKQM 1148
Query: 300 LRNYDINQQLSDLDEKMVTVALYFHPRSIEKIGSGPQEIKIGLSSKGGNSRCFQLVRTDG 121
L Y I+++LS+ D+ +V +AL+FHPR EKIG G EIKIG + +SRCF LVRTDG
Sbjct: 1149 LSKYAIDRELSEADKSIVMMALHFHPRRSEKIGKGAMEIKIGYHKEYEDSRCFMLVRTDG 1208
Query: 120 SVEEFSYHKCIHHALELINPESAAEYQSLRSRWLN 16
+VE+FSY KC+ HALELI P+ A Y +WLN
Sbjct: 1209 TVEDFSYRKCLQHALELIAPQKAKTY-----KWLN 1238
>XP_019231702.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1 [Nicotiana
attenuata] XP_019231703.1 PREDICTED: DNA-directed RNA
polymerase IV subunit 1 [Nicotiana attenuata] OIT28545.1
dna-directed rna polymerase iv subunit 1 [Nicotiana
attenuata]
Length = 1447
Score = 594 bits (1532), Expect = 0.0
Identities = 311/575 (54%), Positives = 401/575 (69%), Gaps = 26/575 (4%)
Frame = -3
Query: 1662 AMGGQPVGXXXXXXXXXXXXXALDQPISALEASPLLNLKEILECG--GNKRNNTISLFLS 1489
A+GG PVG ALD PI ALE SPLLNLK+ILE G N T SLFLS
Sbjct: 862 AIGGHPVGSLAACAISEAAYSALDLPIGALEPSPLLNLKKILEAGVKSNSSEKTASLFLS 921
Query: 1488 KKLRRWAHGFEYGALEVKSHLERVQLLDIVSTVMIMFSPKT--SRHTLPWVCHFHISKDM 1315
++L RWAHGFEYGALEVK HLER+ L DIVSTVMI FSP+T S H+ PWVCHFHI K+
Sbjct: 922 RRLGRWAHGFEYGALEVKGHLERLLLSDIVSTVMICFSPETCKSTHSSPWVCHFHIDKEY 981
Query: 1314 VKRKQIIVQSIIDALCMKCKSTQLKSKVYFPNLQITSKDCSEGN----DATICITVSIVR 1147
VK +++ ++S+IDAL M+ +ST++++ + P+L IT KDCS ++ ICI V++V
Sbjct: 982 VKTRRLKLKSVIDALNMRYRSTRMEAGIDLPSLHITCKDCSVAGMQKANSKICIAVAVVE 1041
Query: 1146 SSKNSSIQLDTLKETVIPFLLGTVIKGSSNVKKVDILWKDPPNVSTSHKGSSGELYLRVF 967
+SK+S LDTL++ VIPFLL TVIKG S KKVDILW++ P+ S S +GS+GELYL+VF
Sbjct: 1042 TSKDSFSLLDTLRDLVIPFLLETVIKGFSAFKKVDILWRESPSTSKSSRGSTGELYLQVF 1101
Query: 966 MSETCDRTRFWGVLMDDCLQLMDMIDWKRSHPEDIHAATLALGIDVARKLFLSKLESAIS 787
MS++CDR FW L+D CL +MD+IDW+RSHP+++H T+A G+DVA K FL L SA+S
Sbjct: 1102 MSQSCDRNNFWNALVDSCLHIMDLIDWERSHPDNVHDLTVAYGVDVAWKYFLRNLNSAVS 1161
Query: 786 DTGKTILPEHLLLVSDCLSSTGEYVALSANGLARQRKQTSVSSPFTQACFSSPADCFVNA 607
+TGK ILPEHL+L +DCL++TGE+V L+ GLA+QRK V SPF QACFS P D FV A
Sbjct: 1162 ETGKKILPEHLVLAADCLTATGEFVPLNTKGLAQQRKCAGVISPFMQACFSHPGDSFVRA 1221
Query: 606 AKMGIVDDLQGSLDALSWGNTPSLGTGGQFDILYSGKGHEPDKPENIYNLLGSHINGHEQ 427
AK + DDLQGSL+AL+WG TPS GTG FDI+YSGKG+EP P ++Y LLG+H+ ++Q
Sbjct: 1222 AKTELSDDLQGSLEALAWGKTPSTGTGFSFDIIYSGKGYEPAAPTDVYALLGNHVTSNKQ 1281
Query: 426 NVKLP-DEGNSMSIKYLAK---------------EGEI--LRKHFNANHFWWMSKKLKDI 301
VK+ DE N + K LA+ + I LR + N +S+ LK +
Sbjct: 1282 KVKVTLDEDNETADKALARRLCKLDDLNTKRCKSQWSIANLRSFLSFNDIKKLSQALKQM 1341
Query: 300 LRNYDINQQLSDLDEKMVTVALYFHPRSIEKIGSGPQEIKIGLSSKGGNSRCFQLVRTDG 121
L Y I+++LS+ D+ +V +AL+FHPR EKIG G EIKIG + +SRCF LVRTDG
Sbjct: 1342 LSKYAIDRELSEADKSIVMMALHFHPRRSEKIGKGAMEIKIGYHKEYEDSRCFMLVRTDG 1401
Query: 120 SVEEFSYHKCIHHALELINPESAAEYQSLRSRWLN 16
+VE+FSY KC+ HALELI P+ A Y +WLN
Sbjct: 1402 TVEDFSYRKCLQHALELIAPQKAKTY-----KWLN 1431
>XP_019156687.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2
[Ipomoea nil]
Length = 1437
Score = 593 bits (1529), Expect = 0.0
Identities = 317/574 (55%), Positives = 401/574 (69%), Gaps = 26/574 (4%)
Frame = -3
Query: 1659 MGGQPVGXXXXXXXXXXXXXALDQPISALEASPLLNLKEILECGGNKRNN--TISLFLSK 1486
+GG PVG ALDQPISALE+SPLLNLK++LE G K + + S+FLSK
Sbjct: 865 VGGHPVGSLAASAISEAAYSALDQPISALESSPLLNLKKVLESGVRKSSGEKSASMFLSK 924
Query: 1485 KLRRWAHGFEYGALEVKSHLERVQLLDIVSTVMIMFSPKTSR--HTLPWVCHFHISKDMV 1312
L RWA+GFEYGALEVK+HLER+ D+VS VMI FS +TSR T PWVCHFHI+K++
Sbjct: 925 MLGRWAYGFEYGALEVKNHLERLLFSDLVSEVMICFSRETSRSSRTSPWVCHFHINKEIA 984
Query: 1311 KRKQIIVQSIIDALCMKCKSTQLKSKVYFPNLQITSKDC----SEGNDATICITVSIVRS 1144
KR+++ ++SI DAL M +T++K+KV PNLQIT DC + D CITV+IV
Sbjct: 985 KRRRLKLESITDALNMSYTATKVKAKVELPNLQITCTDCCVADTSKQDPKSCITVAIVGI 1044
Query: 1143 SKNSSIQLDTLKETVIPFLLGTVIKGSSNVKKVDILWKDP-PNVSTSHKGSSGELYLRVF 967
+K+S +LD L++ VIPFLL TV+KG S KKVDILW++ P +S S SSGELYLRV
Sbjct: 1045 TKDSYPELDILRDFVIPFLLRTVVKGFSAFKKVDILWREEAPILSKSSIRSSGELYLRVL 1104
Query: 966 MSETCDRTRFWGVLMDDCLQLMDMIDWKRSHPEDIHAATLALGIDVARKLFLSKLESAIS 787
MSE CDRT+FW VL+D CLQ+M MIDW+RSHP+DIH ++A GIDVA K FL L SA+S
Sbjct: 1105 MSENCDRTKFWSVLVDSCLQIMTMIDWERSHPDDIHDISVAYGIDVAWKCFLRDLSSAVS 1164
Query: 786 DTGKTILPEHLLLVSDCLSSTGEYVALSANGLARQRKQTSVSSPFTQACFSSPADCFVNA 607
DTGK ILPEHL+L +DCLSS+G+++ALSA GL+ QRK+ VS+PFTQACFSSP + F+ A
Sbjct: 1165 DTGKIILPEHLVLATDCLSSSGQFLALSAKGLSFQRKENGVSTPFTQACFSSPGESFLKA 1224
Query: 606 AKMGIVDDLQGSLDALSWGNTPSLGTGGQFDILYSGKGHEPDKPENIYNLLGSHINGHEQ 427
AKMG+ DDL+G+ +ALSWG P +GTG QFD+LYSGKG EP + ++YNLLG H ++
Sbjct: 1225 AKMGLSDDLRGTAEALSWGKIPPVGTGFQFDVLYSGKGFEPSETTDVYNLLGKHAALQKE 1284
Query: 426 NVKL-PDEGNSMSIKYLAK----------EGE------ILRKHFNANHFWWMSKKLKDIL 298
+ L P+E + K LA+ EGE + F N +SK L++IL
Sbjct: 1285 KMMLYPEESKEIVSKPLAQRLCKYGDFYSEGENSLLPKAISSSFTLNDIQRLSKALRNIL 1344
Query: 297 RNYDINQQLSDLDEKMVTVALYFHPRSIEKIGSGPQEIKIGLSSKGGNSRCFQLVRTDGS 118
YDIN L + D+ +V ALYFHPR EKIG+G EIK+G NSRCF LVR+DG+
Sbjct: 1345 YTYDINDHLKEADKSVVMRALYFHPRRSEKIGTGAHEIKVGQHKGHANSRCFLLVRSDGT 1404
Query: 117 VEEFSYHKCIHHALELINPESAAEYQSLRSRWLN 16
VE+FSYHKC+HHAL+LI P+ A Y SRWLN
Sbjct: 1405 VEDFSYHKCVHHALKLIAPKKAKTY---HSRWLN 1435
>XP_009797463.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
[Nicotiana sylvestris] XP_009797464.1 PREDICTED:
DNA-directed RNA polymerase IV subunit 1 isoform X1
[Nicotiana sylvestris] XP_009797465.1 PREDICTED:
DNA-directed RNA polymerase IV subunit 1 isoform X1
[Nicotiana sylvestris] XP_009797466.1 PREDICTED:
DNA-directed RNA polymerase IV subunit 1 isoform X1
[Nicotiana sylvestris] XP_009797467.1 PREDICTED:
DNA-directed RNA polymerase IV subunit 1 isoform X1
[Nicotiana sylvestris]
Length = 1447
Score = 592 bits (1525), Expect = 0.0
Identities = 312/575 (54%), Positives = 399/575 (69%), Gaps = 26/575 (4%)
Frame = -3
Query: 1662 AMGGQPVGXXXXXXXXXXXXXALDQPISALEASPLLNLKEILECG--GNKRNNTISLFLS 1489
A+GG PVG ALD PI ALE SPLLNLK+ILE G N T SLFLS
Sbjct: 862 AIGGHPVGSLAACAISEAAYSALDLPIGALEPSPLLNLKKILEAGVKSNSSEKTASLFLS 921
Query: 1488 KKLRRWAHGFEYGALEVKSHLERVQLLDIVSTVMIMFSPKT--SRHTLPWVCHFHISKDM 1315
K+L RWAHGFEYGALEVK HLER+ L DIVSTVMI FSP T S H+ PWVCHFHI K+
Sbjct: 922 KRLGRWAHGFEYGALEVKGHLERLLLSDIVSTVMICFSPGTYKSTHSSPWVCHFHIDKEY 981
Query: 1314 VKRKQIIVQSIIDALCMKCKSTQLKSKVYFPNLQITSKDCSEGN----DATICITVSIVR 1147
VK +++ ++S+IDAL M+ +ST++++ + P+L IT KDCS ++ ICI V++V
Sbjct: 982 VKTRRLKLKSVIDALNMRYRSTRMEAGIDLPSLHITCKDCSVAEMQKANSKICIAVAVVE 1041
Query: 1146 SSKNSSIQLDTLKETVIPFLLGTVIKGSSNVKKVDILWKDPPNVSTSHKGSSGELYLRVF 967
+SK+S LDTL++ VIPFLL TVIKG S KKVDILW++ P+ S S +GS+GELYL+VF
Sbjct: 1042 TSKDSFSLLDTLRDLVIPFLLETVIKGFSAFKKVDILWRELPSTSKSSRGSTGELYLQVF 1101
Query: 966 MSETCDRTRFWGVLMDDCLQLMDMIDWKRSHPEDIHAATLALGIDVARKLFLSKLESAIS 787
MSE+CDR FW L+D CL +MD+IDW+ SHP+++H T+A G+DVA K FL L SA+S
Sbjct: 1102 MSESCDRNNFWNALVDSCLHIMDLIDWEWSHPDNVHDLTVAYGVDVAWKYFLRNLNSAVS 1161
Query: 786 DTGKTILPEHLLLVSDCLSSTGEYVALSANGLARQRKQTSVSSPFTQACFSSPADCFVNA 607
+TGK ILPEHL+L +DCL++TGE+V L+ GLA+QRK V SPF QACFS P D FV A
Sbjct: 1162 ETGKKILPEHLVLAADCLTATGEFVPLNTKGLAQQRKCAGVISPFMQACFSHPGDSFVRA 1221
Query: 606 AKMGIVDDLQGSLDALSWGNTPSLGTGGQFDILYSGKGHEPDKPENIYNLLGSHINGHEQ 427
AK + DDLQGSL+AL+WG TPS GTG FDI+YSGKG+EP P ++Y LLG+H+ ++Q
Sbjct: 1222 AKTELSDDLQGSLEALAWGKTPSTGTGFSFDIIYSGKGYEPAAPTDVYALLGNHVTSNKQ 1281
Query: 426 NVKLP-DEGNSMSIKYLAK---------------EGEI--LRKHFNANHFWWMSKKLKDI 301
VK+ DE N + K LA+ + I LR + N +S+ LK +
Sbjct: 1282 QVKVTLDEDNETADKALARRLCKLDDLNTKRCKSQWSIANLRSFLSFNDIKKLSQALKQM 1341
Query: 300 LRNYDINQQLSDLDEKMVTVALYFHPRSIEKIGSGPQEIKIGLSSKGGNSRCFQLVRTDG 121
L Y I+++LS+ D+ +V +AL+FHPR EKIG G EIKIG + +SRCF LVRTDG
Sbjct: 1342 LSKYAIDRELSEADKSIVMMALHFHPRRSEKIGKGAMEIKIGYHKEYEDSRCFMLVRTDG 1401
Query: 120 SVEEFSYHKCIHHALELINPESAAEYQSLRSRWLN 16
+VE+FSY KC+ HALELI P+ A Y +WLN
Sbjct: 1402 TVEDFSYRKCLQHALELIAPQKAKTY-----KWLN 1431
>XP_016472881.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1-like [Nicotiana
tabacum]
Length = 1495
Score = 591 bits (1524), Expect = 0.0
Identities = 312/575 (54%), Positives = 399/575 (69%), Gaps = 26/575 (4%)
Frame = -3
Query: 1662 AMGGQPVGXXXXXXXXXXXXXALDQPISALEASPLLNLKEILECG--GNKRNNTISLFLS 1489
A+GG PVG ALD PI ALE SPLLNLK+ILE G N T SLFLS
Sbjct: 910 AIGGHPVGSLAACAISEAAYSALDLPIGALEPSPLLNLKKILEAGVKSNSSEKTASLFLS 969
Query: 1488 KKLRRWAHGFEYGALEVKSHLERVQLLDIVSTVMIMFSPKT--SRHTLPWVCHFHISKDM 1315
K+L RWAHGFEYGALEVK HLER+ L DIVSTVMI FSP T S H+ PWVCHFHI K+
Sbjct: 970 KRLGRWAHGFEYGALEVKGHLERLLLSDIVSTVMICFSPGTYKSTHSSPWVCHFHIDKEY 1029
Query: 1314 VKRKQIIVQSIIDALCMKCKSTQLKSKVYFPNLQITSKDCSEGN----DATICITVSIVR 1147
VK +++ ++S+IDAL M+ +ST++++ + P+L IT KDCS ++ ICI V++V
Sbjct: 1030 VKTRRLKLKSVIDALNMRYRSTRMEAGIDLPSLHITCKDCSVAEMQKANSKICIAVAVVE 1089
Query: 1146 SSKNSSIQLDTLKETVIPFLLGTVIKGSSNVKKVDILWKDPPNVSTSHKGSSGELYLRVF 967
+SK+S LDTL++ VIPFLL TVIKG S KKVDILW++ P+ S S +GS+GELYL+VF
Sbjct: 1090 TSKDSFSLLDTLRDLVIPFLLETVIKGFSAFKKVDILWRELPSTSKSSRGSTGELYLQVF 1149
Query: 966 MSETCDRTRFWGVLMDDCLQLMDMIDWKRSHPEDIHAATLALGIDVARKLFLSKLESAIS 787
MSE+CDR FW L+D CL +MD+IDW+ SHP+++H T+A G+DVA K FL L SA+S
Sbjct: 1150 MSESCDRNNFWNALVDSCLHIMDLIDWEWSHPDNVHDLTVAYGVDVAWKYFLRNLNSAVS 1209
Query: 786 DTGKTILPEHLLLVSDCLSSTGEYVALSANGLARQRKQTSVSSPFTQACFSSPADCFVNA 607
+TGK ILPEHL+L +DCL++TGE+V L+ GLA+QRK V SPF QACFS P D FV A
Sbjct: 1210 ETGKKILPEHLVLAADCLTATGEFVPLNTKGLAQQRKCAGVISPFMQACFSHPGDSFVRA 1269
Query: 606 AKMGIVDDLQGSLDALSWGNTPSLGTGGQFDILYSGKGHEPDKPENIYNLLGSHINGHEQ 427
AK + DDLQGSL+AL+WG TPS GTG FDI+YSGKG+EP P ++Y LLG+H+ ++Q
Sbjct: 1270 AKTELSDDLQGSLEALAWGKTPSTGTGFSFDIIYSGKGYEPAAPTDVYALLGNHVTSNKQ 1329
Query: 426 NVKLP-DEGNSMSIKYLAK---------------EGEI--LRKHFNANHFWWMSKKLKDI 301
VK+ DE N + K LA+ + I LR + N +S+ LK +
Sbjct: 1330 QVKVTLDEDNETADKALARRLCKLDDLNTKRCKSQWSIANLRSFLSFNGIKKLSQALKQM 1389
Query: 300 LRNYDINQQLSDLDEKMVTVALYFHPRSIEKIGSGPQEIKIGLSSKGGNSRCFQLVRTDG 121
L Y I+++LS+ D+ +V +AL+FHPR EKIG G EIKIG + +SRCF LVRTDG
Sbjct: 1390 LSKYAIDRELSEADKSIVMMALHFHPRRSEKIGKGAMEIKIGYHKEYEDSRCFMLVRTDG 1449
Query: 120 SVEEFSYHKCIHHALELINPESAAEYQSLRSRWLN 16
+VE+FSY KC+ HALELI P+ A Y +WLN
Sbjct: 1450 TVEDFSYRKCLQHALELIAPQKAKTY-----KWLN 1479
>XP_006358858.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
[Solanum tuberosum] XP_015169636.1 PREDICTED:
DNA-directed RNA polymerase IV subunit 1 isoform X1
[Solanum tuberosum] XP_015169637.1 PREDICTED:
DNA-directed RNA polymerase IV subunit 1 isoform X2
[Solanum tuberosum]
Length = 1446
Score = 589 bits (1519), Expect = 0.0
Identities = 316/577 (54%), Positives = 400/577 (69%), Gaps = 27/577 (4%)
Frame = -3
Query: 1662 AMGGQPVGXXXXXXXXXXXXXALDQPISALEASPLLNLKEILECGGNKRNN--TISLFLS 1489
A+GG PVG ALDQP+SALE+SPLLNLK+ILE G R+ T S+FLS
Sbjct: 872 AIGGHPVGSLAACAISEAAYSALDQPVSALESSPLLNLKKILESGAGSRSGEKTASMFLS 931
Query: 1488 KKLRRWAHGFEYGALEVKSHLERVQLLDIVSTVMIMFSPKT--SRHTLPWVCHFHISKDM 1315
K+L RWAHGFEYGALEVK HLER+ L ++VSTVMI FSP+T S H PWVCHFHI K+
Sbjct: 932 KRLGRWAHGFEYGALEVKGHLERLLLSEVVSTVMICFSPETRKSTHNCPWVCHFHIDKEN 991
Query: 1314 VKRKQIIVQSIIDALCMKCKSTQLKSKVYFPNLQITSKDCSEGN----DATICITVSIVR 1147
VK +++ ++SI+DAL M+ ++ K PNL IT KDCS + ICITVS+V
Sbjct: 992 VKTRRLKLRSILDALNMRYRAATTKGGNDLPNLHITCKDCSVAEARKEKSEICITVSVVE 1051
Query: 1146 SSKNSSIQLDTLKETVIPFLLGTVIKGSSNVKKVDILWKDPPNVSTSHKGSSGELYLRVF 967
+SK+ S LDTL++ VIPFLL TVIKG S KKVDILWK+ P+ S S +GS+GELYL+VF
Sbjct: 1052 TSKDPSSLLDTLRDVVIPFLLETVIKGFSAFKKVDILWKELPSPSKSSRGSTGELYLQVF 1111
Query: 966 MSETCDRTRFWGVLMDDCLQLMDMIDWKRSHPEDIHAATLALGIDVARKLFLSKLESAIS 787
MSE+CDR +FW L+D CLQ+ D+IDW+RS+P+D+H T+A GIDVA + FL KL SA+S
Sbjct: 1112 MSESCDRIKFWNALVDSCLQIRDLIDWERSYPDDVHDLTVAYGIDVAWEYFLCKLHSAVS 1171
Query: 786 DTGKTILPEHLLLVSDCLSSTGEYVALSANGLARQRKQTSVSSPFTQACFSSPADCFVNA 607
+TGK ILPEHL+L +D L++TGE+V LSA GL QRK V SPF QACFS+P D FV A
Sbjct: 1172 ETGKKILPEHLVLAADSLTATGEFVPLSAKGLTLQRKAAGVISPFMQACFSNPGDSFVRA 1231
Query: 606 AKMGIVDDLQGSLDALSWGNTPSLGTGGQFDILYSGKGHEPDKPENIYNLLGSHINGHEQ 427
AKMG+ D+LQGSL++L+WG TPS+GTG FDI+YSGKG+EP +P ++Y LL +H+
Sbjct: 1232 AKMGLSDNLQGSLESLAWGKTPSIGTGSSFDIIYSGKGYEPAEPIDVYTLLQNHVTSGTP 1291
Query: 426 NVKLP-DEGNSMSIKYLAK---------------EGEI--LRKHFNANHFWWMSKKLKDI 301
VK+ DE M K LA+ E I LR + N +S+ LK +
Sbjct: 1292 KVKVTLDEDGGMDGKSLARRLDRLDDLNKKSCKSEWSITKLRSFISFNDIKKLSQSLKQM 1351
Query: 300 LRNYDINQQLSDLDEKMVTVALYFHPRSIEKIGSG-PQEIKIGLSSKGGNSRCFQLVRTD 124
L Y I+++L++ D+ + +AL FHPR EKIG G PQEIKIG + +SRCF LVR+D
Sbjct: 1352 LSKYAIDRELNEADKCIAMMALQFHPRRNEKIGKGAPQEIKIGYHKEYEDSRCFMLVRSD 1411
Query: 123 GSVEEFSYHKCIHHALELINPESAAEYQSLRSRWLNR 13
GSVE+FSY KC+ HALELI P+ A SRWLNR
Sbjct: 1412 GSVEDFSYRKCMQHALELIAPQKAK-----TSRWLNR 1443
>XP_016440347.1 PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
[Nicotiana tabacum] XP_016440348.1 PREDICTED:
DNA-directed RNA polymerase IV subunit 1-like isoform X1
[Nicotiana tabacum] XP_016440349.1 PREDICTED:
DNA-directed RNA polymerase IV subunit 1-like isoform X1
[Nicotiana tabacum] XP_016440350.1 PREDICTED:
DNA-directed RNA polymerase IV subunit 1-like isoform X1
[Nicotiana tabacum] XP_016440351.1 PREDICTED:
DNA-directed RNA polymerase IV subunit 1-like isoform X1
[Nicotiana tabacum]
Length = 1447
Score = 589 bits (1519), Expect = 0.0
Identities = 308/575 (53%), Positives = 399/575 (69%), Gaps = 26/575 (4%)
Frame = -3
Query: 1662 AMGGQPVGXXXXXXXXXXXXXALDQPISALEASPLLNLKEILECG--GNKRNNTISLFLS 1489
A+GG PVG ALD P+ ALE SPLLNLK+ILE G N T +LFLS
Sbjct: 862 AIGGHPVGSLAACAISEAAYSALDLPVGALEPSPLLNLKKILEAGVKSNSSEKTATLFLS 921
Query: 1488 KKLRRWAHGFEYGALEVKSHLERVQLLDIVSTVMIMFSPKT--SRHTLPWVCHFHISKDM 1315
++L RWAHGFEYGA+EVK HLER+ L DIVSTVMI FSP+T S H+ PWVCHFHI K+
Sbjct: 922 RRLGRWAHGFEYGAIEVKGHLERLLLSDIVSTVMICFSPETCKSTHSSPWVCHFHIDKEY 981
Query: 1314 VKRKQIIVQSIIDALCMKCKSTQLKSKVYFPNLQITSKDCSEGN----DATICITVSIVR 1147
VK +++ ++S+IDAL M+ +ST++++ + P+L IT KDCS ++ ICI V++V
Sbjct: 982 VKTRRLKLKSVIDALNMRYRSTRMEAGIDLPSLHITCKDCSAAEMQKANSKICIAVAVVE 1041
Query: 1146 SSKNSSIQLDTLKETVIPFLLGTVIKGSSNVKKVDILWKDPPNVSTSHKGSSGELYLRVF 967
+SK+S LDTL++ VIPFLL TVIKG S KKVDILW++ P+ S S +GS+GELYL+VF
Sbjct: 1042 TSKDSFSLLDTLRDLVIPFLLETVIKGFSAFKKVDILWRELPSTSKSSRGSTGELYLQVF 1101
Query: 966 MSETCDRTRFWGVLMDDCLQLMDMIDWKRSHPEDIHAATLALGIDVARKLFLSKLESAIS 787
MSE+CDR FW L+D CL +MD+IDW+RSHP+++H T+A G+DVA K FL L SA+S
Sbjct: 1102 MSESCDRNNFWNALVDSCLHIMDLIDWERSHPDNVHDLTVAYGVDVAWKYFLRNLNSAVS 1161
Query: 786 DTGKTILPEHLLLVSDCLSSTGEYVALSANGLARQRKQTSVSSPFTQACFSSPADCFVNA 607
+TGK ILPEHL+L +DCL++TGE+V L+ GLA+QRK V SPF QACFS P D FV A
Sbjct: 1162 ETGKKILPEHLVLAADCLTATGEFVPLNTKGLAQQRKCAGVISPFMQACFSHPGDSFVRA 1221
Query: 606 AKMGIVDDLQGSLDALSWGNTPSLGTGGQFDILYSGKGHEPDKPENIYNLLGSHINGHEQ 427
AK + DDLQGSL+AL+WG TPS GTG FDI+YS KG+EP P ++Y LLG+H+ + Q
Sbjct: 1222 AKTELSDDLQGSLEALAWGKTPSTGTGFSFDIIYSEKGYEPAAPTDVYALLGNHVTSNRQ 1281
Query: 426 NVKLP-DEGNSMSIKYLAK---------------EGEI--LRKHFNANHFWWMSKKLKDI 301
VK+ DE N + K LA+ + I LR + N +S+ LK +
Sbjct: 1282 KVKVTLDEDNETADKALARRLCKLDDLNTKRCKSQWSIANLRSFLSFNDIKKLSQALKQM 1341
Query: 300 LRNYDINQQLSDLDEKMVTVALYFHPRSIEKIGSGPQEIKIGLSSKGGNSRCFQLVRTDG 121
L Y I+++LS+ D+ +V +AL+FHPR EKIG G EIKIG + +SRCF LVRTDG
Sbjct: 1342 LSKYAIDRELSEADKSIVMMALHFHPRRSEKIGKGAMEIKIGYHKEYEDSRCFMLVRTDG 1401
Query: 120 SVEEFSYHKCIHHALELINPESAAEYQSLRSRWLN 16
+VE+FSY KC+ HALELI P+ A Y +WLN
Sbjct: 1402 TVEDFSYRKCLQHALELIAPQKAKTY-----KWLN 1431