BLASTX nr result

ID: Panax24_contig00033070 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00033070
         (594 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_011627321.1 PREDICTED: protein TOPLESS isoform X3 [Amborella ...    58   2e-06
XP_011627320.1 PREDICTED: protein TOPLESS isoform X2 [Amborella ...    58   2e-06
XP_006855163.1 PREDICTED: topless-related protein 1 isoform X1 [...    58   2e-06
KVI11648.1 hypothetical protein Ccrd_009937 [Cynara cardunculus ...    57   5e-06
XP_018814289.1 PREDICTED: topless-related protein 4-like [Juglan...    56   7e-06
KZN00565.1 hypothetical protein DCAR_009319 [Daucus carota subsp...    56   1e-05

>XP_011627321.1 PREDICTED: protein TOPLESS isoform X3 [Amborella trichopoda]
          Length = 1106

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 32/48 (66%), Positives = 36/48 (75%)
 Frame = -2

Query: 149 LFTFPVSGLLYSNSGFSIWALAANAMHKLWL*QRNDECTTSGKATASV 6
           L    VS L+Y+NSG +I ALAANA+HKLW  QRND  TT GKATASV
Sbjct: 742 LLQIKVSRLIYTNSGVAILALAANAVHKLWKWQRNDRNTT-GKATASV 788


>XP_011627320.1 PREDICTED: protein TOPLESS isoform X2 [Amborella trichopoda]
          Length = 1116

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 32/48 (66%), Positives = 36/48 (75%)
 Frame = -2

Query: 149 LFTFPVSGLLYSNSGFSIWALAANAMHKLWL*QRNDECTTSGKATASV 6
           L    VS L+Y+NSG +I ALAANA+HKLW  QRND  TT GKATASV
Sbjct: 752 LLQIKVSRLIYTNSGVAILALAANAVHKLWKWQRNDRNTT-GKATASV 798


>XP_006855163.1 PREDICTED: topless-related protein 1 isoform X1 [Amborella
           trichopoda] ERN16630.1 hypothetical protein
           AMTR_s00051p00079490 [Amborella trichopoda]
          Length = 1138

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 32/48 (66%), Positives = 36/48 (75%)
 Frame = -2

Query: 149 LFTFPVSGLLYSNSGFSIWALAANAMHKLWL*QRNDECTTSGKATASV 6
           L    VS L+Y+NSG +I ALAANA+HKLW  QRND  TT GKATASV
Sbjct: 774 LLQIKVSRLIYTNSGVAILALAANAVHKLWKWQRNDRNTT-GKATASV 820


>KVI11648.1 hypothetical protein Ccrd_009937 [Cynara cardunculus var. scolymus]
          Length = 1164

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 30/44 (68%), Positives = 36/44 (81%)
 Frame = -2

Query: 134 VSGLLYSNSGFSIWALAANAMHKLWL*QRNDECTTSGKATASVV 3
           VS L+Y+NSG +I ALA+NA+HKLW  QRND  TT GKATASV+
Sbjct: 843 VSRLIYTNSGLAILALASNAVHKLWKWQRNDRNTT-GKATASVL 885


>XP_018814289.1 PREDICTED: topless-related protein 4-like [Juglans regia]
           XP_018814290.1 PREDICTED: topless-related protein 4-like
           [Juglans regia]
          Length = 1132

 Score = 56.2 bits (134), Expect = 7e-06
 Identities = 30/47 (63%), Positives = 36/47 (76%)
 Frame = -2

Query: 143 TFPVSGLLYSNSGFSIWALAANAMHKLWL*QRNDECTTSGKATASVV 3
           T  VS L+Y+NSG +I ALA+NA+HKLW  QRND    +GKATASVV
Sbjct: 774 TMRVSRLIYTNSGLAILALASNAVHKLWKWQRNDR-NLAGKATASVV 819


>KZN00565.1 hypothetical protein DCAR_009319 [Daucus carota subsp. sativus]
          Length = 907

 Score = 55.8 bits (133), Expect = 1e-05
 Identities = 30/43 (69%), Positives = 35/43 (81%)
 Frame = -2

Query: 134 VSGLLYSNSGFSIWALAANAMHKLWL*QRNDECTTSGKATASV 6
           VS L+Y+NSG +I ALAANA+HKLW  QRN E  TSGKATAS+
Sbjct: 655 VSRLIYTNSGVAILALAANAVHKLWKWQRN-ERNTSGKATASI 696


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