BLASTX nr result
ID: Panax24_contig00032211
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax24_contig00032211
(473 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KDO87272.1 hypothetical protein CISIN_1g0414662mg, partial [Citr... 108 2e-26
XP_017637956.1 PREDICTED: DNA mismatch repair protein PMS1 isofo... 112 5e-26
XP_016735764.1 PREDICTED: DNA mismatch repair protein PMS1 [Goss... 112 5e-26
XP_017637955.1 PREDICTED: DNA mismatch repair protein PMS1 isofo... 112 5e-26
XP_017637954.1 PREDICTED: DNA mismatch repair protein PMS1 isofo... 112 5e-26
ABK92950.1 unknown [Populus trichocarpa] 102 7e-26
XP_012438053.1 PREDICTED: DNA mismatch repair protein PMS1 [Goss... 112 7e-26
XP_019164071.1 PREDICTED: DNA mismatch repair protein PMS1 [Ipom... 112 1e-25
CDP03504.1 unnamed protein product [Coffea canephora] 110 3e-25
XP_016494999.1 PREDICTED: DNA mismatch repair protein PMS1-like ... 101 3e-25
XP_012082736.1 PREDICTED: DNA mismatch repair protein PMS1 [Jatr... 110 5e-25
XP_006444299.1 hypothetical protein CICLE_v100188991mg, partial ... 108 6e-25
XP_015577235.1 PREDICTED: DNA mismatch repair protein PMS1 [Rici... 109 6e-25
EEF39241.1 DNA mismatch repair protein pms2, putative [Ricinus c... 109 6e-25
XP_010269535.1 PREDICTED: DNA mismatch repair protein PMS1 isofo... 109 9e-25
XP_010269534.1 PREDICTED: DNA mismatch repair protein PMS1 isofo... 109 9e-25
KCW50018.1 hypothetical protein EUGRSUZ_K03466 [Eucalyptus grandis] 108 1e-24
GAV87176.1 LOW QUALITY PROTEIN: DNA_mis_repair domain-containing... 108 1e-24
XP_010038198.1 PREDICTED: DNA mismatch repair protein PMS1 isofo... 108 1e-24
GAU39560.1 hypothetical protein TSUD_38130 [Trifolium subterraneum] 101 1e-24
>KDO87272.1 hypothetical protein CISIN_1g0414662mg, partial [Citrus sinensis]
Length = 206
Score = 108 bits (269), Expect = 2e-26
Identities = 48/56 (85%), Positives = 51/56 (91%)
Frame = +3
Query: 3 SRACRSSVMVGDPLARNEMQKIIEHLADLKSPWNCPHGRPTMRHLVDLTTIRKRYD 170
SRACRSS+M+GD L RNEMQKI+EHLADL SPWNCPHGRPTMRHLVDLTTIRK D
Sbjct: 145 SRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKNID 200
>XP_017637956.1 PREDICTED: DNA mismatch repair protein PMS1 isoform X3 [Gossypium
arboreum]
Length = 890
Score = 112 bits (281), Expect = 5e-26
Identities = 51/59 (86%), Positives = 54/59 (91%)
Frame = +3
Query: 3 SRACRSSVMVGDPLARNEMQKIIEHLADLKSPWNCPHGRPTMRHLVDLTTIRKRYDADD 179
SRACRSSVMVGDPL RNEMQKI+EHLADLKSPWNCPHGRPTMRHLVDLTT+ K D +D
Sbjct: 829 SRACRSSVMVGDPLGRNEMQKIVEHLADLKSPWNCPHGRPTMRHLVDLTTLSKEPDEND 887
>XP_016735764.1 PREDICTED: DNA mismatch repair protein PMS1 [Gossypium hirsutum]
Length = 968
Score = 112 bits (281), Expect = 5e-26
Identities = 51/59 (86%), Positives = 54/59 (91%)
Frame = +3
Query: 3 SRACRSSVMVGDPLARNEMQKIIEHLADLKSPWNCPHGRPTMRHLVDLTTIRKRYDADD 179
SRACRSSVMVGDPL RNEMQKI+EHLADLKSPWNCPHGRPTMRHLVDLTT+ K D +D
Sbjct: 907 SRACRSSVMVGDPLGRNEMQKIVEHLADLKSPWNCPHGRPTMRHLVDLTTLSKEPDEND 965
>XP_017637955.1 PREDICTED: DNA mismatch repair protein PMS1 isoform X2 [Gossypium
arboreum] KHG16579.1 Mismatch repair endonuclease PMS2
[Gossypium arboreum]
Length = 969
Score = 112 bits (281), Expect = 5e-26
Identities = 51/59 (86%), Positives = 54/59 (91%)
Frame = +3
Query: 3 SRACRSSVMVGDPLARNEMQKIIEHLADLKSPWNCPHGRPTMRHLVDLTTIRKRYDADD 179
SRACRSSVMVGDPL RNEMQKI+EHLADLKSPWNCPHGRPTMRHLVDLTT+ K D +D
Sbjct: 908 SRACRSSVMVGDPLGRNEMQKIVEHLADLKSPWNCPHGRPTMRHLVDLTTLSKEPDEND 966
>XP_017637954.1 PREDICTED: DNA mismatch repair protein PMS1 isoform X1 [Gossypium
arboreum]
Length = 996
Score = 112 bits (281), Expect = 5e-26
Identities = 51/59 (86%), Positives = 54/59 (91%)
Frame = +3
Query: 3 SRACRSSVMVGDPLARNEMQKIIEHLADLKSPWNCPHGRPTMRHLVDLTTIRKRYDADD 179
SRACRSSVMVGDPL RNEMQKI+EHLADLKSPWNCPHGRPTMRHLVDLTT+ K D +D
Sbjct: 935 SRACRSSVMVGDPLGRNEMQKIVEHLADLKSPWNCPHGRPTMRHLVDLTTLSKEPDEND 993
>ABK92950.1 unknown [Populus trichocarpa]
Length = 79
Score = 102 bits (255), Expect = 7e-26
Identities = 45/62 (72%), Positives = 53/62 (85%)
Frame = +3
Query: 3 SRACRSSVMVGDPLARNEMQKIIEHLADLKSPWNCPHGRPTMRHLVDLTTIRKRYDADDI 182
SRACRSSVM+GD L RNEMQKI+EHL DLKSPWNCPHGRPTMRHL+D+++I +R D +
Sbjct: 18 SRACRSSVMIGDALGRNEMQKILEHLVDLKSPWNCPHGRPTMRHLIDMSSIYERPDETEA 77
Query: 183 AL 188
L
Sbjct: 78 GL 79
>XP_012438053.1 PREDICTED: DNA mismatch repair protein PMS1 [Gossypium raimondii]
KJB49940.1 hypothetical protein B456_008G146300
[Gossypium raimondii]
Length = 967
Score = 112 bits (280), Expect = 7e-26
Identities = 51/58 (87%), Positives = 53/58 (91%)
Frame = +3
Query: 3 SRACRSSVMVGDPLARNEMQKIIEHLADLKSPWNCPHGRPTMRHLVDLTTIRKRYDAD 176
SRACRSSVMVGDPL RNEMQKI+EHLADLKSPWNCPHGRPTMRHLVDLTT+ K D D
Sbjct: 907 SRACRSSVMVGDPLGRNEMQKIVEHLADLKSPWNCPHGRPTMRHLVDLTTLSKEPDED 964
>XP_019164071.1 PREDICTED: DNA mismatch repair protein PMS1 [Ipomoea nil]
Length = 929
Score = 112 bits (279), Expect = 1e-25
Identities = 49/58 (84%), Positives = 53/58 (91%)
Frame = +3
Query: 3 SRACRSSVMVGDPLARNEMQKIIEHLADLKSPWNCPHGRPTMRHLVDLTTIRKRYDAD 176
SRACRSSVM+GDPL RNEMQKI+EHLA LKSPWNCPHGRPTMRHL+DLTT+ KR D D
Sbjct: 869 SRACRSSVMIGDPLGRNEMQKILEHLAHLKSPWNCPHGRPTMRHLIDLTTVHKRLDPD 926
>CDP03504.1 unnamed protein product [Coffea canephora]
Length = 927
Score = 110 bits (276), Expect = 3e-25
Identities = 50/62 (80%), Positives = 56/62 (90%)
Frame = +3
Query: 3 SRACRSSVMVGDPLARNEMQKIIEHLADLKSPWNCPHGRPTMRHLVDLTTIRKRYDADDI 182
SRACRSSVMVGDPL RNEMQKI+EHLA LKSPWNCPHGRPTMRHLVDLTT+R R + ++
Sbjct: 866 SRACRSSVMVGDPLGRNEMQKILEHLAGLKSPWNCPHGRPTMRHLVDLTTVRGRINVEEE 925
Query: 183 AL 188
A+
Sbjct: 926 AM 927
>XP_016494999.1 PREDICTED: DNA mismatch repair protein PMS1-like [Nicotiana
tabacum]
Length = 87
Score = 101 bits (251), Expect = 3e-25
Identities = 42/58 (72%), Positives = 53/58 (91%)
Frame = +3
Query: 6 RACRSSVMVGDPLARNEMQKIIEHLADLKSPWNCPHGRPTMRHLVDLTTIRKRYDADD 179
RAC+SS+++GDPL RNEMQKI+E+L+ LKSPWNCPHGRPTMRHLVDL T+ +R +AD+
Sbjct: 25 RACKSSIVIGDPLGRNEMQKILENLSRLKSPWNCPHGRPTMRHLVDLRTVHRRIEADE 82
>XP_012082736.1 PREDICTED: DNA mismatch repair protein PMS1 [Jatropha curcas]
KDP28142.1 hypothetical protein JCGZ_13913 [Jatropha
curcas]
Length = 954
Score = 110 bits (274), Expect = 5e-25
Identities = 48/59 (81%), Positives = 55/59 (93%)
Frame = +3
Query: 3 SRACRSSVMVGDPLARNEMQKIIEHLADLKSPWNCPHGRPTMRHLVDLTTIRKRYDADD 179
SRACRSS+M+GDPL RNEMQKI+EHLADLKSPWNCPHGRPTMRHL+DLT+I KR + +D
Sbjct: 893 SRACRSSIMIGDPLGRNEMQKILEHLADLKSPWNCPHGRPTMRHLLDLTSIYKRSEEND 951
>XP_006444299.1 hypothetical protein CICLE_v100188991mg, partial [Citrus
clementina] ESR57539.1 hypothetical protein
CICLE_v100188991mg, partial [Citrus clementina]
Length = 400
Score = 108 bits (269), Expect = 6e-25
Identities = 48/56 (85%), Positives = 51/56 (91%)
Frame = +3
Query: 3 SRACRSSVMVGDPLARNEMQKIIEHLADLKSPWNCPHGRPTMRHLVDLTTIRKRYD 170
SRACRSS+M+GD L RNEMQKI+EHLADL SPWNCPHGRPTMRHLVDLTTIRK D
Sbjct: 339 SRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKNID 394
>XP_015577235.1 PREDICTED: DNA mismatch repair protein PMS1 [Ricinus communis]
Length = 922
Score = 109 bits (273), Expect = 6e-25
Identities = 49/62 (79%), Positives = 56/62 (90%)
Frame = +3
Query: 3 SRACRSSVMVGDPLARNEMQKIIEHLADLKSPWNCPHGRPTMRHLVDLTTIRKRYDADDI 182
SRACRSSVM+GDPL RNEMQKI+EHLADL SPWNCPHGRPTMRHLVD+T+I KR +D+
Sbjct: 861 SRACRSSVMIGDPLGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDMTSIYKRSYENDL 920
Query: 183 AL 188
+L
Sbjct: 921 SL 922
>EEF39241.1 DNA mismatch repair protein pms2, putative [Ricinus communis]
Length = 924
Score = 109 bits (273), Expect = 6e-25
Identities = 49/62 (79%), Positives = 56/62 (90%)
Frame = +3
Query: 3 SRACRSSVMVGDPLARNEMQKIIEHLADLKSPWNCPHGRPTMRHLVDLTTIRKRYDADDI 182
SRACRSSVM+GDPL RNEMQKI+EHLADL SPWNCPHGRPTMRHLVD+T+I KR +D+
Sbjct: 863 SRACRSSVMIGDPLGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDMTSIYKRSYENDL 922
Query: 183 AL 188
+L
Sbjct: 923 SL 924
>XP_010269535.1 PREDICTED: DNA mismatch repair protein PMS1 isoform X2 [Nelumbo
nucifera]
Length = 913
Score = 109 bits (272), Expect = 9e-25
Identities = 48/56 (85%), Positives = 52/56 (92%)
Frame = +3
Query: 3 SRACRSSVMVGDPLARNEMQKIIEHLADLKSPWNCPHGRPTMRHLVDLTTIRKRYD 170
SRACRSSVM+GDPL +NEMQKI+EHLADLKSPWNCPHGRPTMRHL+DL TI KR D
Sbjct: 847 SRACRSSVMIGDPLGKNEMQKILEHLADLKSPWNCPHGRPTMRHLIDLATIYKRLD 902
>XP_010269534.1 PREDICTED: DNA mismatch repair protein PMS1 isoform X1 [Nelumbo
nucifera]
Length = 944
Score = 109 bits (272), Expect = 9e-25
Identities = 48/56 (85%), Positives = 52/56 (92%)
Frame = +3
Query: 3 SRACRSSVMVGDPLARNEMQKIIEHLADLKSPWNCPHGRPTMRHLVDLTTIRKRYD 170
SRACRSSVM+GDPL +NEMQKI+EHLADLKSPWNCPHGRPTMRHL+DL TI KR D
Sbjct: 878 SRACRSSVMIGDPLGKNEMQKILEHLADLKSPWNCPHGRPTMRHLIDLATIYKRLD 933
>KCW50018.1 hypothetical protein EUGRSUZ_K03466 [Eucalyptus grandis]
Length = 899
Score = 108 bits (271), Expect = 1e-24
Identities = 48/58 (82%), Positives = 53/58 (91%)
Frame = +3
Query: 3 SRACRSSVMVGDPLARNEMQKIIEHLADLKSPWNCPHGRPTMRHLVDLTTIRKRYDAD 176
SRACRSSVM+GDPL ++EMQKI+EHLADLKSPWNCPHGRPTMRHLVDL T+ KR D D
Sbjct: 840 SRACRSSVMIGDPLGKSEMQKILEHLADLKSPWNCPHGRPTMRHLVDLATVGKRSDED 897
>GAV87176.1 LOW QUALITY PROTEIN: DNA_mis_repair domain-containing protein/MutL_C
domain-containing protein/HATPase_c_3 domain-containing
protein, partial [Cephalotus follicularis]
Length = 917
Score = 108 bits (271), Expect = 1e-24
Identities = 50/59 (84%), Positives = 53/59 (89%)
Frame = +3
Query: 3 SRACRSSVMVGDPLARNEMQKIIEHLADLKSPWNCPHGRPTMRHLVDLTTIRKRYDADD 179
SRACRSSV +GD LARNEMQKIIEHLADLKSPWNCPHGRPTMRHLVDLT + KR D +D
Sbjct: 858 SRACRSSVRIGDALARNEMQKIIEHLADLKSPWNCPHGRPTMRHLVDLTIMHKRSDEND 916
>XP_010038198.1 PREDICTED: DNA mismatch repair protein PMS1 isoform X1 [Eucalyptus
grandis] KCW50017.1 hypothetical protein EUGRSUZ_K03466
[Eucalyptus grandis]
Length = 922
Score = 108 bits (271), Expect = 1e-24
Identities = 48/58 (82%), Positives = 53/58 (91%)
Frame = +3
Query: 3 SRACRSSVMVGDPLARNEMQKIIEHLADLKSPWNCPHGRPTMRHLVDLTTIRKRYDAD 176
SRACRSSVM+GDPL ++EMQKI+EHLADLKSPWNCPHGRPTMRHLVDL T+ KR D D
Sbjct: 863 SRACRSSVMIGDPLGKSEMQKILEHLADLKSPWNCPHGRPTMRHLVDLATVGKRSDED 920
>GAU39560.1 hypothetical protein TSUD_38130 [Trifolium subterraneum]
Length = 146
Score = 101 bits (252), Expect = 1e-24
Identities = 44/54 (81%), Positives = 50/54 (92%)
Frame = +3
Query: 3 SRACRSSVMVGDPLARNEMQKIIEHLADLKSPWNCPHGRPTMRHLVDLTTIRKR 164
SRACRSS+M+GD L RNEMQKI++HLA+LKSPWNCPHGRPTMRHLVDL+ I KR
Sbjct: 86 SRACRSSIMIGDALGRNEMQKILDHLAELKSPWNCPHGRPTMRHLVDLSKIHKR 139