BLASTX nr result
ID: Panax24_contig00032165
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax24_contig00032165
(359 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_012090313.1 PREDICTED: uncharacterized protein LOC105648509 i... 82 2e-16
XP_012090311.1 PREDICTED: uncharacterized protein LOC105648509 i... 82 2e-16
XP_008223895.1 PREDICTED: protein COFACTOR ASSEMBLY OF COMPLEX C... 82 2e-16
KVI10118.1 Protein of unknown function DUF2930 [Cynara carduncul... 81 5e-16
ONI27267.1 hypothetical protein PRUPE_1G077000 [Prunus persica] 80 7e-16
XP_007211756.1 hypothetical protein PRUPE_ppa009484mg [Prunus pe... 80 9e-16
XP_017238377.1 PREDICTED: protein COFACTOR ASSEMBLY OF COMPLEX C... 79 3e-15
KZN00597.1 hypothetical protein DCAR_009351 [Daucus carota subsp... 79 7e-15
XP_017611755.1 PREDICTED: protein COFACTOR ASSEMBLY OF COMPLEX C... 74 3e-13
CDP10647.1 unnamed protein product [Coffea canephora] 74 3e-13
XP_017611754.1 PREDICTED: protein COFACTOR ASSEMBLY OF COMPLEX C... 74 3e-13
XP_016672512.1 PREDICTED: protein COFACTOR ASSEMBLY OF COMPLEX C... 72 4e-13
XP_016668550.1 PREDICTED: protein COFACTOR ASSEMBLY OF COMPLEX C... 72 4e-13
XP_012484059.1 PREDICTED: uncharacterized protein LOC105798505 i... 72 4e-13
XP_002322447.2 hypothetical protein POPTR_0015s13640g [Populus t... 73 5e-13
XP_011041615.1 PREDICTED: uncharacterized protein LOC105137534 [... 73 6e-13
XP_016672511.1 PREDICTED: protein COFACTOR ASSEMBLY OF COMPLEX C... 72 8e-13
XP_016668549.1 PREDICTED: protein COFACTOR ASSEMBLY OF COMPLEX C... 72 8e-13
XP_012484058.1 PREDICTED: uncharacterized protein LOC105798505 i... 72 8e-13
XP_016672509.1 PREDICTED: protein COFACTOR ASSEMBLY OF COMPLEX C... 72 8e-13
>XP_012090313.1 PREDICTED: uncharacterized protein LOC105648509 isoform X2
[Jatropha curcas]
Length = 257
Score = 82.0 bits (201), Expect = 2e-16
Identities = 48/89 (53%), Positives = 55/89 (61%)
Frame = +3
Query: 93 INPLIQLNLPMKFRANTCLPHISNTHTRARNRKSRISCTGSDNSQNKEXXXXXXXLNLSV 272
I+PLIQLN+ KFRA RKS + + DNSQ +E LNLS+
Sbjct: 6 IHPLIQLNIRPKFRAKV-------------TRKSLVIASRIDNSQTRENQQQE--LNLSI 50
Query: 273 LRFTLGIPGLDESNLPKWIGYTFGSLLLL 359
LRFT GIPGLDES LP+WIGY FGSLLLL
Sbjct: 51 LRFTFGIPGLDESYLPRWIGYGFGSLLLL 79
>XP_012090311.1 PREDICTED: uncharacterized protein LOC105648509 isoform X1
[Jatropha curcas] XP_012090312.1 PREDICTED:
uncharacterized protein LOC105648509 isoform X1
[Jatropha curcas] KDP22322.1 hypothetical protein
JCGZ_26153 [Jatropha curcas]
Length = 289
Score = 82.0 bits (201), Expect = 2e-16
Identities = 48/89 (53%), Positives = 55/89 (61%)
Frame = +3
Query: 93 INPLIQLNLPMKFRANTCLPHISNTHTRARNRKSRISCTGSDNSQNKEXXXXXXXLNLSV 272
I+PLIQLN+ KFRA RKS + + DNSQ +E LNLS+
Sbjct: 6 IHPLIQLNIRPKFRAKV-------------TRKSLVIASRIDNSQTRENQQQE--LNLSI 50
Query: 273 LRFTLGIPGLDESNLPKWIGYTFGSLLLL 359
LRFT GIPGLDES LP+WIGY FGSLLLL
Sbjct: 51 LRFTFGIPGLDESYLPRWIGYGFGSLLLL 79
>XP_008223895.1 PREDICTED: protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2,
chloroplastic [Prunus mume]
Length = 290
Score = 82.0 bits (201), Expect = 2e-16
Identities = 48/88 (54%), Positives = 53/88 (60%)
Frame = +3
Query: 96 NPLIQLNLPMKFRANTCLPHISNTHTRARNRKSRISCTGSDNSQNKEXXXXXXXLNLSVL 275
N LIQL +P KFRA C + S R N KS NS + LNLSVL
Sbjct: 11 NSLIQLKIPPKFRARNCRTNFSAVSARLDNSKS--------NSAEPQ-------LNLSVL 55
Query: 276 RFTLGIPGLDESNLPKWIGYTFGSLLLL 359
RFTLGIPGLDES LP+WIGY FGSLL+L
Sbjct: 56 RFTLGIPGLDESYLPRWIGYGFGSLLIL 83
>KVI10118.1 Protein of unknown function DUF2930 [Cynara cardunculus var.
scolymus]
Length = 301
Score = 81.3 bits (199), Expect = 5e-16
Identities = 40/58 (68%), Positives = 47/58 (81%)
Frame = +3
Query: 186 RKSRISCTGSDNSQNKEXXXXXXXLNLSVLRFTLGIPGLDESNLPKWIGYTFGSLLLL 359
+ S+ISC+G DNSQN++ LNLSVLRFTLGIPGLDES LP+WIGY FGSLL+L
Sbjct: 36 KSSKISCSGHDNSQNQQQQ-----LNLSVLRFTLGIPGLDESYLPRWIGYAFGSLLVL 88
>ONI27267.1 hypothetical protein PRUPE_1G077000 [Prunus persica]
Length = 266
Score = 80.5 bits (197), Expect = 7e-16
Identities = 46/88 (52%), Positives = 51/88 (57%)
Frame = +3
Query: 96 NPLIQLNLPMKFRANTCLPHISNTHTRARNRKSRISCTGSDNSQNKEXXXXXXXLNLSVL 275
N LIQL +P KFRA C + S R N KS + LNLSVL
Sbjct: 11 NSLIQLKIPPKFRARNCRTNFSAVSARLDNSKSSSA---------------EPQLNLSVL 55
Query: 276 RFTLGIPGLDESNLPKWIGYTFGSLLLL 359
RFTLGIPGLDES LP+WIGY FGSLL+L
Sbjct: 56 RFTLGIPGLDESYLPRWIGYGFGSLLIL 83
>XP_007211756.1 hypothetical protein PRUPE_ppa009484mg [Prunus persica] ONI27268.1
hypothetical protein PRUPE_1G077000 [Prunus persica]
Length = 290
Score = 80.5 bits (197), Expect = 9e-16
Identities = 46/88 (52%), Positives = 51/88 (57%)
Frame = +3
Query: 96 NPLIQLNLPMKFRANTCLPHISNTHTRARNRKSRISCTGSDNSQNKEXXXXXXXLNLSVL 275
N LIQL +P KFRA C + S R N KS + LNLSVL
Sbjct: 11 NSLIQLKIPPKFRARNCRTNFSAVSARLDNSKSSSA---------------EPQLNLSVL 55
Query: 276 RFTLGIPGLDESNLPKWIGYTFGSLLLL 359
RFTLGIPGLDES LP+WIGY FGSLL+L
Sbjct: 56 RFTLGIPGLDESYLPRWIGYGFGSLLIL 83
>XP_017238377.1 PREDICTED: protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2,
chloroplastic [Daucus carota subsp. sativus]
XP_017238378.1 PREDICTED: protein COFACTOR ASSEMBLY OF
COMPLEX C SUBUNIT B CCB2, chloroplastic [Daucus carota
subsp. sativus]
Length = 287
Score = 79.0 bits (193), Expect = 3e-15
Identities = 47/87 (54%), Positives = 55/87 (63%), Gaps = 5/87 (5%)
Frame = +3
Query: 114 NLPMKFRA--NTCLPHISNTHTRARN---RKSRISCTGSDNSQNKEXXXXXXXLNLSVLR 278
NLP+ + NT + S+TH + R SRI CT Q ++ LNLSVLR
Sbjct: 14 NLPLHISSSHNT---YTSSTHKYTHSSKLRNSRIYCTNDSQDQQQQ-------LNLSVLR 63
Query: 279 FTLGIPGLDESNLPKWIGYTFGSLLLL 359
FTLGIPGLDESNLPKWIGY FGSLL+L
Sbjct: 64 FTLGIPGLDESNLPKWIGYAFGSLLML 90
>KZN00597.1 hypothetical protein DCAR_009351 [Daucus carota subsp. sativus]
Length = 383
Score = 79.0 bits (193), Expect = 7e-15
Identities = 47/87 (54%), Positives = 55/87 (63%), Gaps = 5/87 (5%)
Frame = +3
Query: 114 NLPMKFRA--NTCLPHISNTHTRARN---RKSRISCTGSDNSQNKEXXXXXXXLNLSVLR 278
NLP+ + NT + S+TH + R SRI CT Q ++ LNLSVLR
Sbjct: 14 NLPLHISSSHNT---YTSSTHKYTHSSKLRNSRIYCTNDSQDQQQQ-------LNLSVLR 63
Query: 279 FTLGIPGLDESNLPKWIGYTFGSLLLL 359
FTLGIPGLDESNLPKWIGY FGSLL+L
Sbjct: 64 FTLGIPGLDESNLPKWIGYAFGSLLML 90
>XP_017611755.1 PREDICTED: protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2,
chloroplastic isoform X2 [Gossypium arboreum] KHG04050.1
Chaperone htpG [Gossypium arboreum]
Length = 278
Score = 73.6 bits (179), Expect = 3e-13
Identities = 47/91 (51%), Positives = 55/91 (60%), Gaps = 2/91 (2%)
Frame = +3
Query: 93 INPLIQLN--LPMKFRANTCLPHISNTHTRARNRKSRISCTGSDNSQNKEXXXXXXXLNL 266
+NPLIQL LP+KFR P I++ R DNSQ + +NL
Sbjct: 11 LNPLIQLKTPLPLKFR-----PKIASISARL------------DNSQQQ--------MNL 45
Query: 267 SVLRFTLGIPGLDESNLPKWIGYTFGSLLLL 359
SVLRFTLGIPGLDES LP+WIGY FGSLL+L
Sbjct: 46 SVLRFTLGIPGLDESYLPRWIGYGFGSLLIL 76
>CDP10647.1 unnamed protein product [Coffea canephora]
Length = 314
Score = 73.9 bits (180), Expect = 3e-13
Identities = 39/63 (61%), Positives = 44/63 (69%)
Frame = +3
Query: 171 TRARNRKSRISCTGSDNSQNKEXXXXXXXLNLSVLRFTLGIPGLDESNLPKWIGYTFGSL 350
TR ++ISC+ SDNS + LNLSVLRFT GIPGLDES LP+WIGY FGSL
Sbjct: 48 TRKLKSLAKISCSRSDNSSHSTSQQQQ--LNLSVLRFTFGIPGLDESYLPRWIGYAFGSL 105
Query: 351 LLL 359
LLL
Sbjct: 106 LLL 108
>XP_017611754.1 PREDICTED: protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2,
chloroplastic isoform X1 [Gossypium arboreum]
Length = 280
Score = 73.6 bits (179), Expect = 3e-13
Identities = 47/91 (51%), Positives = 55/91 (60%), Gaps = 2/91 (2%)
Frame = +3
Query: 93 INPLIQLN--LPMKFRANTCLPHISNTHTRARNRKSRISCTGSDNSQNKEXXXXXXXLNL 266
+NPLIQL LP+KFR P I++ R DNSQ + +NL
Sbjct: 11 LNPLIQLKTPLPLKFR-----PKIASISARL------------DNSQQQ--------MNL 45
Query: 267 SVLRFTLGIPGLDESNLPKWIGYTFGSLLLL 359
SVLRFTLGIPGLDES LP+WIGY FGSLL+L
Sbjct: 46 SVLRFTLGIPGLDESYLPRWIGYGFGSLLIL 76
>XP_016672512.1 PREDICTED: protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2,
chloroplastic-like isoform X4 [Gossypium hirsutum]
Length = 227
Score = 72.4 bits (176), Expect = 4e-13
Identities = 46/91 (50%), Positives = 55/91 (60%), Gaps = 2/91 (2%)
Frame = +3
Query: 93 INPLIQLN--LPMKFRANTCLPHISNTHTRARNRKSRISCTGSDNSQNKEXXXXXXXLNL 266
+NPLIQL LP+KFR P +++ R DNSQ + +NL
Sbjct: 11 LNPLIQLKTPLPLKFR-----PKMASISARL------------DNSQQQ--------MNL 45
Query: 267 SVLRFTLGIPGLDESNLPKWIGYTFGSLLLL 359
SVLRFTLGIPGLDES LP+WIGY FGSLL+L
Sbjct: 46 SVLRFTLGIPGLDESYLPRWIGYGFGSLLIL 76
>XP_016668550.1 PREDICTED: protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2,
chloroplastic-like isoform X3 [Gossypium hirsutum]
XP_016668551.1 PREDICTED: protein COFACTOR ASSEMBLY OF
COMPLEX C SUBUNIT B CCB2, chloroplastic-like isoform X3
[Gossypium hirsutum]
Length = 227
Score = 72.4 bits (176), Expect = 4e-13
Identities = 46/91 (50%), Positives = 55/91 (60%), Gaps = 2/91 (2%)
Frame = +3
Query: 93 INPLIQLN--LPMKFRANTCLPHISNTHTRARNRKSRISCTGSDNSQNKEXXXXXXXLNL 266
+NPLIQL LP+KFR P +++ R DNSQ + +NL
Sbjct: 11 LNPLIQLKTPLPLKFR-----PKMASISARL------------DNSQQQ--------MNL 45
Query: 267 SVLRFTLGIPGLDESNLPKWIGYTFGSLLLL 359
SVLRFTLGIPGLDES LP+WIGY FGSLL+L
Sbjct: 46 SVLRFTLGIPGLDESYLPRWIGYGFGSLLIL 76
>XP_012484059.1 PREDICTED: uncharacterized protein LOC105798505 isoform X4
[Gossypium raimondii] XP_012484060.1 PREDICTED:
uncharacterized protein LOC105798505 isoform X4
[Gossypium raimondii] KJB34075.1 hypothetical protein
B456_006G046700 [Gossypium raimondii]
Length = 227
Score = 72.4 bits (176), Expect = 4e-13
Identities = 46/91 (50%), Positives = 55/91 (60%), Gaps = 2/91 (2%)
Frame = +3
Query: 93 INPLIQLN--LPMKFRANTCLPHISNTHTRARNRKSRISCTGSDNSQNKEXXXXXXXLNL 266
+NPLIQL LP+KFR P +++ R DNSQ + +NL
Sbjct: 11 LNPLIQLKTPLPLKFR-----PKMASISARL------------DNSQQQ--------MNL 45
Query: 267 SVLRFTLGIPGLDESNLPKWIGYTFGSLLLL 359
SVLRFTLGIPGLDES LP+WIGY FGSLL+L
Sbjct: 46 SVLRFTLGIPGLDESYLPRWIGYGFGSLLIL 76
>XP_002322447.2 hypothetical protein POPTR_0015s13640g [Populus trichocarpa]
EEF06574.2 hypothetical protein POPTR_0015s13640g
[Populus trichocarpa]
Length = 288
Score = 73.2 bits (178), Expect = 5e-13
Identities = 45/89 (50%), Positives = 52/89 (58%)
Frame = +3
Query: 93 INPLIQLNLPMKFRANTCLPHISNTHTRARNRKSRISCTGSDNSQNKEXXXXXXXLNLSV 272
I+PLIQL +FRA + RKS SDN Q++ LNLSV
Sbjct: 6 IHPLIQLKTHHQFRAK-------------KTRKSIAIHASSDNPQSQRQQQQ---LNLSV 49
Query: 273 LRFTLGIPGLDESNLPKWIGYTFGSLLLL 359
LRFT GIPGLDES LP+WIGY FGSLL+L
Sbjct: 50 LRFTFGIPGLDESYLPRWIGYGFGSLLIL 78
>XP_011041615.1 PREDICTED: uncharacterized protein LOC105137534 [Populus
euphratica]
Length = 287
Score = 72.8 bits (177), Expect = 6e-13
Identities = 45/89 (50%), Positives = 52/89 (58%)
Frame = +3
Query: 93 INPLIQLNLPMKFRANTCLPHISNTHTRARNRKSRISCTGSDNSQNKEXXXXXXXLNLSV 272
I+PLIQL +FRA + RKS SDN Q++ LNLSV
Sbjct: 6 IHPLIQLKTRHQFRAK-------------KPRKSIAIYASSDNPQSQRQQQ----LNLSV 48
Query: 273 LRFTLGIPGLDESNLPKWIGYTFGSLLLL 359
LRFT GIPGLDES LP+WIGY FGSLL+L
Sbjct: 49 LRFTFGIPGLDESYLPRWIGYGFGSLLIL 77
>XP_016672511.1 PREDICTED: protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2,
chloroplastic-like isoform X3 [Gossypium hirsutum]
Length = 278
Score = 72.4 bits (176), Expect = 8e-13
Identities = 46/91 (50%), Positives = 55/91 (60%), Gaps = 2/91 (2%)
Frame = +3
Query: 93 INPLIQLN--LPMKFRANTCLPHISNTHTRARNRKSRISCTGSDNSQNKEXXXXXXXLNL 266
+NPLIQL LP+KFR P +++ R DNSQ + +NL
Sbjct: 11 LNPLIQLKTPLPLKFR-----PKMASISARL------------DNSQQQ--------MNL 45
Query: 267 SVLRFTLGIPGLDESNLPKWIGYTFGSLLLL 359
SVLRFTLGIPGLDES LP+WIGY FGSLL+L
Sbjct: 46 SVLRFTLGIPGLDESYLPRWIGYGFGSLLIL 76
>XP_016668549.1 PREDICTED: protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2,
chloroplastic-like isoform X2 [Gossypium hirsutum]
Length = 278
Score = 72.4 bits (176), Expect = 8e-13
Identities = 46/91 (50%), Positives = 55/91 (60%), Gaps = 2/91 (2%)
Frame = +3
Query: 93 INPLIQLN--LPMKFRANTCLPHISNTHTRARNRKSRISCTGSDNSQNKEXXXXXXXLNL 266
+NPLIQL LP+KFR P +++ R DNSQ + +NL
Sbjct: 11 LNPLIQLKTPLPLKFR-----PKMASISARL------------DNSQQQ--------MNL 45
Query: 267 SVLRFTLGIPGLDESNLPKWIGYTFGSLLLL 359
SVLRFTLGIPGLDES LP+WIGY FGSLL+L
Sbjct: 46 SVLRFTLGIPGLDESYLPRWIGYGFGSLLIL 76
>XP_012484058.1 PREDICTED: uncharacterized protein LOC105798505 isoform X3
[Gossypium raimondii]
Length = 278
Score = 72.4 bits (176), Expect = 8e-13
Identities = 46/91 (50%), Positives = 55/91 (60%), Gaps = 2/91 (2%)
Frame = +3
Query: 93 INPLIQLN--LPMKFRANTCLPHISNTHTRARNRKSRISCTGSDNSQNKEXXXXXXXLNL 266
+NPLIQL LP+KFR P +++ R DNSQ + +NL
Sbjct: 11 LNPLIQLKTPLPLKFR-----PKMASISARL------------DNSQQQ--------MNL 45
Query: 267 SVLRFTLGIPGLDESNLPKWIGYTFGSLLLL 359
SVLRFTLGIPGLDES LP+WIGY FGSLL+L
Sbjct: 46 SVLRFTLGIPGLDESYLPRWIGYGFGSLLIL 76
>XP_016672509.1 PREDICTED: protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2,
chloroplastic-like isoform X2 [Gossypium hirsutum]
XP_016672510.1 PREDICTED: protein COFACTOR ASSEMBLY OF
COMPLEX C SUBUNIT B CCB2, chloroplastic-like isoform X2
[Gossypium hirsutum]
Length = 280
Score = 72.4 bits (176), Expect = 8e-13
Identities = 46/91 (50%), Positives = 55/91 (60%), Gaps = 2/91 (2%)
Frame = +3
Query: 93 INPLIQLN--LPMKFRANTCLPHISNTHTRARNRKSRISCTGSDNSQNKEXXXXXXXLNL 266
+NPLIQL LP+KFR P +++ R DNSQ + +NL
Sbjct: 11 LNPLIQLKTPLPLKFR-----PKMASISARL------------DNSQQQ--------MNL 45
Query: 267 SVLRFTLGIPGLDESNLPKWIGYTFGSLLLL 359
SVLRFTLGIPGLDES LP+WIGY FGSLL+L
Sbjct: 46 SVLRFTLGIPGLDESYLPRWIGYGFGSLLIL 76