BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00031878
         (458 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017257918.1 PREDICTED: DNA-directed RNA polymerase I subunit ...    71   2e-11
KZM92164.1 hypothetical protein DCAR_020471 [Daucus carota subsp...    71   2e-11
XP_019198973.1 PREDICTED: DNA-directed RNA polymerase I subunit ...    67   5e-10
XP_019198972.1 PREDICTED: DNA-directed RNA polymerase I subunit ...    67   5e-10
XP_019194732.1 PREDICTED: DNA-directed RNA polymerase I subunit ...    66   8e-10
XP_009334966.1 PREDICTED: DNA-directed RNA polymerase I subunit ...    62   1e-09
XP_015866147.1 PREDICTED: DNA-directed RNA polymerase I subunit ...    65   3e-09
XP_010666878.1 PREDICTED: DNA-directed RNA polymerase I subunit ...    64   4e-09
JAU73211.1 DNA-directed RNA polymerase I subunit rpa1 [Noccaea c...    64   5e-09
KFK35011.1 hypothetical protein AALP_AA5G222600 [Arabis alpina]        64   5e-09
XP_006402858.1 hypothetical protein EUTSA_v10005738mg [Eutrema s...    64   7e-09
KCW48062.1 hypothetical protein EUGRSUZ_K01811 [Eucalyptus grandis]    63   1e-08
JAU46626.1 DNA-directed RNA polymerase I subunit rpa1 [Noccaea c...    63   1e-08
JAV01220.1 DNA-directed RNA polymerase I subunit rpa1 [Noccaea c...    63   1e-08
JAU22834.1 DNA-directed RNA polymerase I subunit rpa1 [Noccaea c...    63   1e-08
XP_010036456.1 PREDICTED: DNA-directed RNA polymerase I subunit ...    63   1e-08
XP_010036455.1 PREDICTED: DNA-directed RNA polymerase I subunit ...    63   1e-08
XP_002876429.1 hypothetical protein ARALYDRAFT_486216 [Arabidops...    63   1e-08
XP_010427648.1 PREDICTED: DNA-directed RNA polymerase I subunit ...    63   1e-08
CBI29879.3 unnamed protein product, partial [Vitis vinifera]           63   1e-08

>XP_017257918.1 PREDICTED: DNA-directed RNA polymerase I subunit 1 isoform X1
           [Daucus carota subsp. sativus]
          Length = 1638

 Score = 70.9 bits (172), Expect = 2e-11
 Identities = 30/43 (69%), Positives = 37/43 (86%)
 Frame = +3

Query: 6   CGQKSSDCPGHCGHIELVLSVYHPLLFDKLYNLIQQTIKCKTC 134
           CGQ+ +DCPGHCGHIELV +V++PLLFDKLYN+I +T  C TC
Sbjct: 67  CGQRCNDCPGHCGHIELVSTVFNPLLFDKLYNIIART--CFTC 107


>KZM92164.1 hypothetical protein DCAR_020471 [Daucus carota subsp. sativus]
          Length = 1654

 Score = 70.9 bits (172), Expect = 2e-11
 Identities = 30/43 (69%), Positives = 37/43 (86%)
 Frame = +3

Query: 6   CGQKSSDCPGHCGHIELVLSVYHPLLFDKLYNLIQQTIKCKTC 134
           CGQ+ +DCPGHCGHIELV +V++PLLFDKLYN+I +T  C TC
Sbjct: 67  CGQRCNDCPGHCGHIELVSTVFNPLLFDKLYNIIART--CFTC 107


>XP_019198973.1 PREDICTED: DNA-directed RNA polymerase I subunit 1-like isoform X2
           [Ipomoea nil]
          Length = 1686

 Score = 67.0 bits (162), Expect = 5e-10
 Identities = 29/43 (67%), Positives = 35/43 (81%)
 Frame = +3

Query: 6   CGQKSSDCPGHCGHIELVLSVYHPLLFDKLYNLIQQTIKCKTC 134
           CGQ+S +CPGHCGHI+LV  VY+PLLFD LYNL+Q+T  C  C
Sbjct: 67  CGQRSFNCPGHCGHIDLVSPVYNPLLFDMLYNLLQRT--CLFC 107


>XP_019198972.1 PREDICTED: DNA-directed RNA polymerase I subunit 1-like isoform X1
           [Ipomoea nil]
          Length = 1696

 Score = 67.0 bits (162), Expect = 5e-10
 Identities = 29/43 (67%), Positives = 35/43 (81%)
 Frame = +3

Query: 6   CGQKSSDCPGHCGHIELVLSVYHPLLFDKLYNLIQQTIKCKTC 134
           CGQ+S +CPGHCGHI+LV  VY+PLLFD LYNL+Q+T  C  C
Sbjct: 67  CGQRSFNCPGHCGHIDLVSPVYNPLLFDMLYNLLQRT--CLFC 107


>XP_019194732.1 PREDICTED: DNA-directed RNA polymerase I subunit 1-like [Ipomoea
           nil] XP_019194733.1 PREDICTED: DNA-directed RNA
           polymerase I subunit 1-like [Ipomoea nil] XP_019194734.1
           PREDICTED: DNA-directed RNA polymerase I subunit 1-like
           [Ipomoea nil]
          Length = 1694

 Score = 66.2 bits (160), Expect = 8e-10
 Identities = 29/43 (67%), Positives = 34/43 (79%)
 Frame = +3

Query: 6   CGQKSSDCPGHCGHIELVLSVYHPLLFDKLYNLIQQTIKCKTC 134
           CGQ+S  CPGHCGHI+LV  VY+PLLFD LYNL+Q+T  C  C
Sbjct: 67  CGQRSFHCPGHCGHIDLVSPVYNPLLFDMLYNLLQRT--CLFC 107


>XP_009334966.1 PREDICTED: DNA-directed RNA polymerase I subunit 1-like [Pyrus x
           bretschneideri] XP_009334967.1 PREDICTED: DNA-directed
           RNA polymerase I subunit 1-like [Pyrus x bretschneideri]
          Length = 104

 Score = 61.6 bits (148), Expect = 1e-09
 Identities = 24/36 (66%), Positives = 31/36 (86%)
 Frame = +3

Query: 6   CGQKSSDCPGHCGHIELVLSVYHPLLFDKLYNLIQQ 113
           CG+KS +CPGHCGHI+L L VY+PLLF+ LY L+Q+
Sbjct: 68  CGEKSRNCPGHCGHIDLALPVYNPLLFNTLYKLLQR 103


>XP_015866147.1 PREDICTED: DNA-directed RNA polymerase I subunit 1 [Ziziphus
           jujuba]
          Length = 1767

 Score = 64.7 bits (156), Expect = 3e-09
 Identities = 28/43 (65%), Positives = 35/43 (81%)
 Frame = +3

Query: 6   CGQKSSDCPGHCGHIELVLSVYHPLLFDKLYNLIQQTIKCKTC 134
           CGQ+S  CPGHCGHI+LV  VY+PLLFD LY+L+Q+T  C +C
Sbjct: 66  CGQRSYFCPGHCGHIDLVSPVYNPLLFDNLYDLLQRT--CFSC 106


>XP_010666878.1 PREDICTED: DNA-directed RNA polymerase I subunit 1 [Beta vulgaris
           subsp. vulgaris] KMS95772.1 hypothetical protein
           BVRB_005160 [Beta vulgaris subsp. vulgaris]
          Length = 1702

 Score = 64.3 bits (155), Expect = 4e-09
 Identities = 28/43 (65%), Positives = 33/43 (76%)
 Frame = +3

Query: 6   CGQKSSDCPGHCGHIELVLSVYHPLLFDKLYNLIQQTIKCKTC 134
           CGQ+S  CPGHCGHI+LV  VYHPLLF++LY L+Q T  C  C
Sbjct: 67  CGQRSFYCPGHCGHIDLVSLVYHPLLFNRLYRLLQGT--CLAC 107


>JAU73211.1 DNA-directed RNA polymerase I subunit rpa1 [Noccaea caerulescens]
          Length = 1626

 Score = 63.9 bits (154), Expect = 5e-09
 Identities = 29/53 (54%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
 Frame = +3

Query: 6   CGQKSSDCPGHCGHIELVLSVYHPLLFDKLYNLIQQT-IKCKTCGAKNPQITK 161
           CGQ S +CPGHCGHIELV  +YHPLLF  L+N +Q+T   C    AK   + K
Sbjct: 69  CGQLSLNCPGHCGHIELVYPIYHPLLFSLLFNFLQRTCFYCHHFMAKKKDVEK 121


>KFK35011.1 hypothetical protein AALP_AA5G222600 [Arabis alpina]
          Length = 1658

 Score = 63.9 bits (154), Expect = 5e-09
 Identities = 28/53 (52%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
 Frame = +3

Query: 6   CGQKSSDCPGHCGHIELVLSVYHPLLFDKLYNLIQQT-IKCKTCGAKNPQITK 161
           CGQ +  CPGHCGHIEL+  +YHPLLF+ LY  +Q+T   C    AK P + K
Sbjct: 68  CGQLTLGCPGHCGHIELLYPIYHPLLFNLLYQFLQRTCFFCHHFKAKRPDVVK 120


>XP_006402858.1 hypothetical protein EUTSA_v10005738mg [Eutrema salsugineum]
           ESQ44311.1 hypothetical protein EUTSA_v10005738mg
           [Eutrema salsugineum]
          Length = 1697

 Score = 63.5 bits (153), Expect = 7e-09
 Identities = 26/37 (70%), Positives = 30/37 (81%)
 Frame = +3

Query: 6   CGQKSSDCPGHCGHIELVLSVYHPLLFDKLYNLIQQT 116
           CGQ S  CPGHCGHIELV  +YHPLLF+ LYN +Q+T
Sbjct: 69  CGQLSLVCPGHCGHIELVYPIYHPLLFNLLYNFLQRT 105


>KCW48062.1 hypothetical protein EUGRSUZ_K01811 [Eucalyptus grandis]
          Length = 1606

 Score = 63.2 bits (152), Expect = 1e-08
 Identities = 25/37 (67%), Positives = 33/37 (89%)
 Frame = +3

Query: 6   CGQKSSDCPGHCGHIELVLSVYHPLLFDKLYNLIQQT 116
           CGQ+S +CPGHCGHI+LV  VY+PLLF+ LYNL+++T
Sbjct: 13  CGQRSFNCPGHCGHIDLVSPVYNPLLFNTLYNLLKRT 49


>JAU46626.1 DNA-directed RNA polymerase I subunit rpa1 [Noccaea caerulescens]
          Length = 1626

 Score = 63.2 bits (152), Expect = 1e-08
 Identities = 25/37 (67%), Positives = 30/37 (81%)
 Frame = +3

Query: 6   CGQKSSDCPGHCGHIELVLSVYHPLLFDKLYNLIQQT 116
           CGQ S +CPGHCGHIELV  +YHPLLF  L+N +Q+T
Sbjct: 69  CGQLSLNCPGHCGHIELVYPIYHPLLFSLLFNFLQRT 105


>JAV01220.1 DNA-directed RNA polymerase I subunit rpa1 [Noccaea caerulescens]
          Length = 1632

 Score = 63.2 bits (152), Expect = 1e-08
 Identities = 25/37 (67%), Positives = 30/37 (81%)
 Frame = +3

Query: 6   CGQKSSDCPGHCGHIELVLSVYHPLLFDKLYNLIQQT 116
           CGQ S +CPGHCGHIELV  +YHPLLF  L+N +Q+T
Sbjct: 69  CGQLSLNCPGHCGHIELVYPIYHPLLFSLLFNFLQRT 105


>JAU22834.1 DNA-directed RNA polymerase I subunit rpa1 [Noccaea caerulescens]
          Length = 1632

 Score = 63.2 bits (152), Expect = 1e-08
 Identities = 25/37 (67%), Positives = 30/37 (81%)
 Frame = +3

Query: 6   CGQKSSDCPGHCGHIELVLSVYHPLLFDKLYNLIQQT 116
           CGQ S +CPGHCGHIELV  +YHPLLF  L+N +Q+T
Sbjct: 69  CGQLSLNCPGHCGHIELVYPIYHPLLFSLLFNFLQRT 105


>XP_010036456.1 PREDICTED: DNA-directed RNA polymerase I subunit 1 isoform X2
           [Eucalyptus grandis]
          Length = 1669

 Score = 63.2 bits (152), Expect = 1e-08
 Identities = 25/37 (67%), Positives = 33/37 (89%)
 Frame = +3

Query: 6   CGQKSSDCPGHCGHIELVLSVYHPLLFDKLYNLIQQT 116
           CGQ+S +CPGHCGHI+LV  VY+PLLF+ LYNL+++T
Sbjct: 66  CGQRSFNCPGHCGHIDLVSPVYNPLLFNTLYNLLKRT 102


>XP_010036455.1 PREDICTED: DNA-directed RNA polymerase I subunit 1 isoform X1
           [Eucalyptus grandis]
          Length = 1669

 Score = 63.2 bits (152), Expect = 1e-08
 Identities = 25/37 (67%), Positives = 33/37 (89%)
 Frame = +3

Query: 6   CGQKSSDCPGHCGHIELVLSVYHPLLFDKLYNLIQQT 116
           CGQ+S +CPGHCGHI+LV  VY+PLLF+ LYNL+++T
Sbjct: 66  CGQRSFNCPGHCGHIDLVSPVYNPLLFNTLYNLLKRT 102


>XP_002876429.1 hypothetical protein ARALYDRAFT_486216 [Arabidopsis lyrata subsp.
           lyrata] EFH52688.1 hypothetical protein
           ARALYDRAFT_486216 [Arabidopsis lyrata subsp. lyrata]
          Length = 1678

 Score = 63.2 bits (152), Expect = 1e-08
 Identities = 27/43 (62%), Positives = 32/43 (74%)
 Frame = +3

Query: 6   CGQKSSDCPGHCGHIELVLSVYHPLLFDKLYNLIQQTIKCKTC 134
           CGQ +  CPGHCGHIELV  +YHPLLF+ LYN +Q+T  C  C
Sbjct: 82  CGQLNLACPGHCGHIELVYPIYHPLLFNLLYNFLQRT--CFIC 122


>XP_010427648.1 PREDICTED: DNA-directed RNA polymerase I subunit 1-like [Camelina
           sativa]
          Length = 1662

 Score = 62.8 bits (151), Expect = 1e-08
 Identities = 29/53 (54%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
 Frame = +3

Query: 6   CGQKSSDCPGHCGHIELVLSVYHPLLFDKLYNLIQQT-IKCKTCGAKNPQITK 161
           CGQ    CPGHCGHIELV  +YHPLLF  LYN +Q+T   C+   AK  ++ K
Sbjct: 69  CGQLKLCCPGHCGHIELVYPIYHPLLFSLLYNFLQRTCFFCRHFMAKANEVEK 121


>CBI29879.3 unnamed protein product, partial [Vitis vinifera]
          Length = 1669

 Score = 62.8 bits (151), Expect = 1e-08
 Identities = 26/37 (70%), Positives = 33/37 (89%)
 Frame = +3

Query: 6   CGQKSSDCPGHCGHIELVLSVYHPLLFDKLYNLIQQT 116
           CGQ+S  CPGHCGHI+LV SVY+PLLF+ L+NL+Q+T
Sbjct: 67  CGQRSFYCPGHCGHIDLVSSVYNPLLFNLLHNLLQKT 103