BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00031610
         (545 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KVH88101.1 Aspartate decarboxylase-like domain-containing protei...   117   1e-36
XP_015056787.1 PREDICTED: DNA-directed RNA polymerase V subunit ...   112   8e-32
XP_019066486.1 PREDICTED: DNA-directed RNA polymerase V subunit ...   112   8e-32
AAY89359.1 RNA polymerase IV largest subunit, partial [Solanum l...   112   9e-32
XP_011089162.1 PREDICTED: DNA-directed RNA polymerase V subunit ...   127   8e-31
XP_002265533.1 PREDICTED: DNA-directed RNA polymerase V subunit ...   121   1e-28
CBI40152.3 unnamed protein product, partial [Vitis vinifera]          121   1e-28
CDP18669.1 unnamed protein product [Coffea canephora]                 120   4e-28
OMO87191.1 RNA polymerase, alpha subunit [Corchorus olitorius]        117   2e-27
XP_017225052.1 PREDICTED: DNA-directed RNA polymerase V subunit ...   114   4e-26
XP_017257953.1 PREDICTED: DNA-directed RNA polymerase V subunit ...   114   4e-26
XP_018849434.1 PREDICTED: DNA-directed RNA polymerase V subunit ...   113   7e-26
XP_018849433.1 PREDICTED: DNA-directed RNA polymerase V subunit ...   113   7e-26
XP_016447372.1 PREDICTED: DNA-directed RNA polymerase V subunit ...   108   3e-25
XP_010095982.1 DNA-directed RNA polymerase E subunit 1 [Morus no...   111   5e-25
XP_010032299.1 PREDICTED: DNA-directed RNA polymerase V subunit ...   109   2e-24
OAY53390.1 hypothetical protein MANES_04G159600 [Manihot esculenta]   109   2e-24
XP_018632630.1 PREDICTED: DNA-directed RNA polymerase V subunit ...   108   3e-24
KMT17107.1 hypothetical protein BVRB_2g041610 [Beta vulgaris sub...   108   3e-24
XP_018632629.1 PREDICTED: DNA-directed RNA polymerase V subunit ...   108   3e-24

>KVH88101.1 Aspartate decarboxylase-like domain-containing protein [Cynara
           cardunculus var. scolymus]
          Length = 1495

 Score =  117 bits (293), Expect(2) = 1e-36
 Identities = 64/128 (50%), Positives = 85/128 (66%)
 Frame = -1

Query: 404 LILTFNRVIMSSALNDIVTSIFFGKGPNEVLRFFSFLSLY*WNIYIQMDLVLD*KIFFVP 225
           L L ++R ++ S +ND+++SIFF KGP EVL+ F+ L              L  + F VP
Sbjct: 571 LKLDYSRDVIQSIVNDVISSIFFSKGPKEVLKLFNSLQPMLMENLCCEGFNLSLEDFIVP 630

Query: 224 NEVLDSIHT*IHNVSPLLYYLRSSYNELIELQLEKHIRHVTMPVASFILKSSAMGNLIDS 45
             VL SI   I  VS LLY+LRS+YNE+I LQLEKH+R V  P++ FIL+ S+MGNLIDS
Sbjct: 631 KNVLRSIEAEIQEVSSLLYHLRSNYNEVIALQLEKHLRVVKGPISEFILRFSSMGNLIDS 690

Query: 44  KSDSAINK 21
           KSDSA+ +
Sbjct: 691 KSDSAVTR 698



 Score = 63.2 bits (152), Expect(2) = 1e-36
 Identities = 26/49 (53%), Positives = 36/49 (73%)
 Frame = -3

Query: 540 YFFNRAAAQQLALYFCGNLPNPALLRAQNPGPLWTILQLLQTALPLNFD 394
           YFF +A  QQLAL+   +LP P++L+    GPLWT+L+LL+T+LP  FD
Sbjct: 509 YFFTKAQVQQLALFTSNSLPTPSMLKVHRSGPLWTVLELLETSLPRGFD 557


>XP_015056787.1 PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Solanum
           pennellii] XP_015056795.1 PREDICTED: DNA-directed RNA
           polymerase V subunit 1-like [Solanum pennellii]
          Length = 2044

 Score =  112 bits (280), Expect(2) = 8e-32
 Identities = 59/126 (46%), Positives = 84/126 (66%)
 Frame = -1

Query: 398 LTFNRVIMSSALNDIVTSIFFGKGPNEVLRFFSFLSLY*WNIYIQMDLVLD*KIFFVPNE 219
           + ++R ++SS LND++TSI+F KGPN+VL+FF+ L              +  + F++   
Sbjct: 573 IDYHRDLISSILNDVITSIYFMKGPNDVLKFFNSLQPLLMENLCTEGFSISLRDFYMTKA 632

Query: 218 VLDSIHT*IHNVSPLLYYLRSSYNELIELQLEKHIRHVTMPVASFILKSSAMGNLIDSKS 39
           V D I   I  +S LL++LRSSYNE +E+QLE H+R+  +PV  F+LKSS MG LIDSKS
Sbjct: 633 VRDGIQERIQCMSKLLHHLRSSYNESVEVQLEHHLRNEKLPVIDFVLKSSGMGVLIDSKS 692

Query: 38  DSAINK 21
           +SA NK
Sbjct: 693 ESAFNK 698



 Score = 52.0 bits (123), Expect(2) = 8e-32
 Identities = 24/50 (48%), Positives = 35/50 (70%)
 Frame = -3

Query: 543 NYFFNRAAAQQLALYFCGNLPNPALLRAQNPGPLWTILQLLQTALPLNFD 394
           +YFF++AAAQQLA++    LP+ A++  +  G +WT LQ+L  ALP  FD
Sbjct: 508 HYFFDKAAAQQLAMFLPMALPDSAVVDVRKSGAMWTTLQILGAALPDGFD 557


>XP_019066486.1 PREDICTED: DNA-directed RNA polymerase V subunit 1 [Solanum
           lycopersicum] XP_019066488.1 PREDICTED: DNA-directed RNA
           polymerase V subunit 1 [Solanum lycopersicum]
          Length = 1984

 Score =  112 bits (280), Expect(2) = 8e-32
 Identities = 59/126 (46%), Positives = 84/126 (66%)
 Frame = -1

Query: 398 LTFNRVIMSSALNDIVTSIFFGKGPNEVLRFFSFLSLY*WNIYIQMDLVLD*KIFFVPNE 219
           + ++R ++SS LND++TSI+F KGPN+VL+FF+ L              +  + F++   
Sbjct: 573 IDYHRDLISSILNDVITSIYFMKGPNDVLKFFNSLQPLLMENLCTEGFSISLRDFYMTKA 632

Query: 218 VLDSIHT*IHNVSPLLYYLRSSYNELIELQLEKHIRHVTMPVASFILKSSAMGNLIDSKS 39
           V D I   I  +S LL++LRSSYNE +E+QLE H+R+  +PV  F+LKSS MG LIDSKS
Sbjct: 633 VRDGIQERIQCMSKLLHHLRSSYNESVEVQLEHHLRNEKLPVIDFVLKSSGMGVLIDSKS 692

Query: 38  DSAINK 21
           +SA NK
Sbjct: 693 ESAFNK 698



 Score = 52.0 bits (123), Expect(2) = 8e-32
 Identities = 24/50 (48%), Positives = 35/50 (70%)
 Frame = -3

Query: 543 NYFFNRAAAQQLALYFCGNLPNPALLRAQNPGPLWTILQLLQTALPLNFD 394
           +YFF++AAAQQLA++    LP+ A++  +  G +WT LQ+L  ALP  FD
Sbjct: 508 HYFFDKAAAQQLAMFLPMALPDSAVVDVRKSGAMWTTLQILGAALPDGFD 557


>AAY89359.1 RNA polymerase IV largest subunit, partial [Solanum lycopersicum]
          Length = 1127

 Score =  112 bits (280), Expect(2) = 9e-32
 Identities = 59/126 (46%), Positives = 84/126 (66%)
 Frame = -1

Query: 398 LTFNRVIMSSALNDIVTSIFFGKGPNEVLRFFSFLSLY*WNIYIQMDLVLD*KIFFVPNE 219
           + ++R ++SS LND++TSI+F KGPN+VL+FF+ L              +  + F++   
Sbjct: 122 IDYHRDLISSILNDVITSIYFMKGPNDVLKFFNSLQPLLMENLCTEGFSISLRDFYMTKA 181

Query: 218 VLDSIHT*IHNVSPLLYYLRSSYNELIELQLEKHIRHVTMPVASFILKSSAMGNLIDSKS 39
           V D I   I  +S LL++LRSSYNE +E+QLE H+R+  +PV  F+LKSS MG LIDSKS
Sbjct: 182 VRDGIQERIQCMSKLLHHLRSSYNESVEVQLEHHLRNEKLPVIDFVLKSSGMGVLIDSKS 241

Query: 38  DSAINK 21
           +SA NK
Sbjct: 242 ESAFNK 247



 Score = 52.0 bits (123), Expect(2) = 9e-32
 Identities = 24/50 (48%), Positives = 35/50 (70%)
 Frame = -3

Query: 543 NYFFNRAAAQQLALYFCGNLPNPALLRAQNPGPLWTILQLLQTALPLNFD 394
           +YFF++AAAQQLA++    LP+ A++  +  G +WT LQ+L  ALP  FD
Sbjct: 57  HYFFDKAAAQQLAMFLPMALPDSAVVDVRKSGAMWTTLQILGAALPDGFD 106


>XP_011089162.1 PREDICTED: DNA-directed RNA polymerase V subunit 1 [Sesamum
           indicum]
          Length = 2096

 Score =  127 bits (320), Expect = 8e-31
 Identities = 66/128 (51%), Positives = 93/128 (72%)
 Frame = -1

Query: 404 LILTFNRVIMSSALNDIVTSIFFGKGPNEVLRFFSFLSLY*WNIYIQMDLVLD*KIFFVP 225
           L L FNR +M+S LNDIVTS+FF KGP EVLRFF+ +              +  + FF+P
Sbjct: 557 LSLEFNRDVMASILNDIVTSLFFLKGPKEVLRFFNSIQPLLMESLYSEGFSVSLRDFFLP 616

Query: 224 NEVLDSIHT*IHNVSPLLYYLRSSYNELIELQLEKHIRHVTMPVASFILKSSAMGNLIDS 45
            +VL+SI   I  +SPLLY+LR+SY+E I+LQL+ ++R + +PV +F+LKSSA+G+LIDS
Sbjct: 617 RDVLESIQENIQKISPLLYHLRASYSESIDLQLDTYLRSMKIPVTNFVLKSSAIGHLIDS 676

Query: 44  KSDSAINK 21
           KS+SA++K
Sbjct: 677 KSESALSK 684



 Score = 68.9 bits (167), Expect = 2e-10
 Identities = 48/123 (39%), Positives = 62/123 (50%), Gaps = 19/123 (15%)
 Frame = -3

Query: 543 NYFFNRAAAQQLALYFCGNLPNPALLRAQNPGPLWTILQLLQTALPLNFDF**GHYVICP 364
           NYF NRAAAQQLA++    LP PA++++ + GPLWT  Q+LQT LP +FD     ++I  
Sbjct: 495 NYFLNRAAAQQLAMFVPSVLPKPAVVKSDS-GPLWTASQILQTTLPSSFDCSGERHIISK 553

Query: 363 **YCH-------------------FYLLWEGS*RGFEVFFFP*PILMEYLYSNGFSAGLE 241
                                   F+L  +G       F    P+LME LYS GFS  L 
Sbjct: 554 SEILSLEFNRDVMASILNDIVTSLFFL--KGPKEVLRFFNSIQPLLMESLYSEGFSVSLR 611

Query: 240 DFF 232
           DFF
Sbjct: 612 DFF 614


>XP_002265533.1 PREDICTED: DNA-directed RNA polymerase V subunit 1 [Vitis vinifera]
          Length = 1830

 Score =  121 bits (303), Expect = 1e-28
 Identities = 65/128 (50%), Positives = 86/128 (67%)
 Frame = -1

Query: 404 LILTFNRVIMSSALNDIVTSIFFGKGPNEVLRFFSFLSLY*WNIYIQMDLVLD*KIFFVP 225
           L + +NR ++ S +N+IVTSIF  KGPNEVL+FF  L              +  + F +P
Sbjct: 568 LKVDYNRDVLQSLVNEIVTSIFSEKGPNEVLKFFDSLQPLLMENLFSEGFSVSLEDFSIP 627

Query: 224 NEVLDSIHT*IHNVSPLLYYLRSSYNELIELQLEKHIRHVTMPVASFILKSSAMGNLIDS 45
           +EV  +I   + ++S LLY LRS YNEL++LQ E H+R   +PVA+FIL SSA+GNLIDS
Sbjct: 628 SEVTQNIQKNVEDISSLLYNLRSMYNELLQLQAENHLRLTKVPVANFILNSSALGNLIDS 687

Query: 44  KSDSAINK 21
           KSDSAINK
Sbjct: 688 KSDSAINK 695



 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 48/119 (40%), Positives = 61/119 (51%), Gaps = 17/119 (14%)
 Frame = -3

Query: 540 YFFNRAAAQQLALYFCGNLPNPALLRAQNPGPLWTILQLLQTALPLNFD-F**GHYV--- 373
           YF N+AAAQQL ++   +LP PALL++   GP WT LQ+LQTALP  FD     H++   
Sbjct: 506 YFLNKAAAQQLVMFVSMSLPRPALLKSPCSGPCWTALQILQTALPSYFDCIGERHWISKS 565

Query: 372 -ICP**YCHFYL------------LWEGS*RGFEVFFFP*PILMEYLYSNGFSAGLEDF 235
            I    Y    L              +G     + F    P+LME L+S GFS  LEDF
Sbjct: 566 AILKVDYNRDVLQSLVNEIVTSIFSEKGPNEVLKFFDSLQPLLMENLFSEGFSVSLEDF 624


>CBI40152.3 unnamed protein product, partial [Vitis vinifera]
          Length = 1890

 Score =  121 bits (303), Expect = 1e-28
 Identities = 65/128 (50%), Positives = 86/128 (67%)
 Frame = -1

Query: 404  LILTFNRVIMSSALNDIVTSIFFGKGPNEVLRFFSFLSLY*WNIYIQMDLVLD*KIFFVP 225
            L + +NR ++ S +N+IVTSIF  KGPNEVL+FF  L              +  + F +P
Sbjct: 628  LKVDYNRDVLQSLVNEIVTSIFSEKGPNEVLKFFDSLQPLLMENLFSEGFSVSLEDFSIP 687

Query: 224  NEVLDSIHT*IHNVSPLLYYLRSSYNELIELQLEKHIRHVTMPVASFILKSSAMGNLIDS 45
            +EV  +I   + ++S LLY LRS YNEL++LQ E H+R   +PVA+FIL SSA+GNLIDS
Sbjct: 688  SEVTQNIQKNVEDISSLLYNLRSMYNELLQLQAENHLRLTKVPVANFILNSSALGNLIDS 747

Query: 44   KSDSAINK 21
            KSDSAINK
Sbjct: 748  KSDSAINK 755



 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 48/119 (40%), Positives = 61/119 (51%), Gaps = 17/119 (14%)
 Frame = -3

Query: 540 YFFNRAAAQQLALYFCGNLPNPALLRAQNPGPLWTILQLLQTALPLNFD-F**GHYV--- 373
           YF N+AAAQQL ++   +LP PALL++   GP WT LQ+LQTALP  FD     H++   
Sbjct: 566 YFLNKAAAQQLVMFVSMSLPRPALLKSPCSGPCWTALQILQTALPSYFDCIGERHWISKS 625

Query: 372 -ICP**YCHFYL------------LWEGS*RGFEVFFFP*PILMEYLYSNGFSAGLEDF 235
            I    Y    L              +G     + F    P+LME L+S GFS  LEDF
Sbjct: 626 AILKVDYNRDVLQSLVNEIVTSIFSEKGPNEVLKFFDSLQPLLMENLFSEGFSVSLEDF 684


>CDP18669.1 unnamed protein product [Coffea canephora]
          Length = 1946

 Score =  120 bits (300), Expect = 4e-28
 Identities = 63/128 (49%), Positives = 94/128 (73%), Gaps = 2/128 (1%)
 Frame = -1

Query: 398 LTFNRVIMSSALNDIVTSIFFGKGPNEVLRFFSFLS-LY*WNIYIQ-MDLVLD*KIFFVP 225
           L FNR ++ S   D++TSIFF KGP EVLRFF+FL+ L   N+Y +   + L+   F++P
Sbjct: 570 LDFNRDLLQSTFIDVITSIFFSKGPKEVLRFFNFLTPLLMENLYSEGFSVCLE--DFYIP 627

Query: 224 NEVLDSIHT*IHNVSPLLYYLRSSYNELIELQLEKHIRHVTMPVASFILKSSAMGNLIDS 45
             +++++   + ++SPLLY++RS+ +E I+LQLE  +R V  PV++F+LKSSAMG LIDS
Sbjct: 628 KAIIEAVQQSLQDISPLLYHMRSTQSESIKLQLENFLRGVKSPVSNFVLKSSAMGYLIDS 687

Query: 44  KSDSAINK 21
           KS+SA+NK
Sbjct: 688 KSESALNK 695



 Score = 71.2 bits (173), Expect = 4e-11
 Identities = 45/120 (37%), Positives = 61/120 (50%), Gaps = 17/120 (14%)
 Frame = -3

Query: 540 YFFNRAAAQQLALYFCGNLPNPALLRAQNPGPLWTILQLLQTALPLNFDF**GHYVICP* 361
           YFF+R AA+QLA++    LP PA+++ ++ GP WT+LQLLQTALP +F+     Y+    
Sbjct: 506 YFFDRVAAEQLAMFVPAALPMPAVVKYRSSGPFWTVLQLLQTALPASFECSGERYLTHSS 565

Query: 360 *YCHF-----------------YLLWEGS*RGFEVFFFP*PILMEYLYSNGFSAGLEDFF 232
                                     +G       F F  P+LME LYS GFS  LEDF+
Sbjct: 566 ELVKLDFNRDLLQSTFIDVITSIFFSKGPKEVLRFFNFLTPLLMENLYSEGFSVCLEDFY 625


>OMO87191.1 RNA polymerase, alpha subunit [Corchorus olitorius]
          Length = 1956

 Score =  117 bits (294), Expect = 2e-27
 Identities = 65/129 (50%), Positives = 86/129 (66%), Gaps = 1/129 (0%)
 Frame = -1

Query: 404 LILTFNRVIMSSALNDIVTSIFFGKGPNEVLRFFSFLS-LY*WNIYIQMDLVLD*KIFFV 228
           L + F R +M S +N++VTSIFF KGP EVL FF  L  L   N++ +    L  + F +
Sbjct: 569 LKVDFGRELMPSVINEVVTSIFFEKGPKEVLEFFDSLQPLLMENVFAE-GFSLSLEDFSI 627

Query: 227 PNEVLDSIHT*IHNVSPLLYYLRSSYNELIELQLEKHIRHVTMPVASFILKSSAMGNLID 48
             E ++ I   +  +SPLLY LRS+YNEL+ LQ+E HIR   +PVA+FI KSSA G+LID
Sbjct: 628 SREAIEDIEKDVQLISPLLYQLRSTYNELVGLQIENHIREAKVPVANFIRKSSAFGDLID 687

Query: 47  SKSDSAINK 21
           SKSDSA+ K
Sbjct: 688 SKSDSAVTK 696



 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 39/122 (31%), Positives = 53/122 (43%), Gaps = 17/122 (13%)
 Frame = -3

Query: 540 YFFNRAAAQQLALYFCGNLPNPALLRAQNPGPLWTILQLLQTALPLNFDF**GHYVICP* 361
           + F +A  QQL++Y    LP PALL+  + GP WT  Q+LQTA P   +     Y+I   
Sbjct: 507 FLFKKADVQQLSMYLSSALPQPALLKGNSFGPCWTAFQILQTAFPACLECSSNRYLIGKS 566

Query: 360 *YCHF-----------------YLLWEGS*RGFEVFFFP*PILMEYLYSNGFSAGLEDFF 232
                                     +G     E F    P+LME +++ GFS  LEDF 
Sbjct: 567 EILKVDFGRELMPSVINEVVTSIFFEKGPKEVLEFFDSLQPLLMENVFAEGFSLSLEDFS 626

Query: 231 CS 226
            S
Sbjct: 627 IS 628


>XP_017225052.1 PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Daucus
           carota subsp. sativus]
          Length = 1989

 Score =  114 bits (285), Expect = 4e-26
 Identities = 64/129 (49%), Positives = 89/129 (68%), Gaps = 1/129 (0%)
 Frame = -1

Query: 404 LILTFNRVIMSSALNDIVTSIFFGKGPNEVLRFF-SFLSLY*WNIYIQMDLVLD*KIFFV 228
           L + +NR +M S +ND+V+SIFFGKGP E LRFF S   +   N+Y +    +  + F+V
Sbjct: 447 LDVDYNRDLMQSIINDVVSSIFFGKGPIEALRFFDSVQPMLMENLYTE-GFSVGLEDFYV 505

Query: 227 PNEVLDSIHT*IHNVSPLLYYLRSSYNELIELQLEKHIRHVTMPVASFILKSSAMGNLID 48
           P E++ +    I   S +LY +R S+NELI LQLE+ IR + +P+A+ ILKSSA+G LID
Sbjct: 506 PKEIIQNCEARIQEYSSILYRMRESHNELIALQLERQIRSLRVPIANQILKSSAIGYLID 565

Query: 47  SKSDSAINK 21
           SKS+SAINK
Sbjct: 566 SKSESAINK 574



 Score = 73.6 bits (179), Expect = 6e-12
 Identities = 49/120 (40%), Positives = 59/120 (49%), Gaps = 17/120 (14%)
 Frame = -3

Query: 540 YFFNRAAAQQLALYFCGNLPNPALLRAQNPGPLWTILQLLQTALPLNFDF**GHYVICP* 361
           YFF RAA QQLA++  G LP PALLRAQ+   LWT+LQLLQ +LP  FD     + I   
Sbjct: 385 YFFGRAATQQLAMFVSGVLPIPALLRAQSSDSLWTVLQLLQISLPPKFDCCGERHNIWQS 444

Query: 360 *YCHF-----------------YLLWEGS*RGFEVFFFP*PILMEYLYSNGFSAGLEDFF 232
                                     +G       F    P+LME LY+ GFS GLEDF+
Sbjct: 445 QILDVDYNRDLMQSIINDVVSSIFFGKGPIEALRFFDSVQPMLMENLYTEGFSVGLEDFY 504


>XP_017257953.1 PREDICTED: DNA-directed RNA polymerase V subunit 1 [Daucus carota
           subsp. sativus] KZM90293.1 hypothetical protein
           DCAR_022342 [Daucus carota subsp. sativus]
          Length = 2116

 Score =  114 bits (285), Expect = 4e-26
 Identities = 64/129 (49%), Positives = 89/129 (68%), Gaps = 1/129 (0%)
 Frame = -1

Query: 404 LILTFNRVIMSSALNDIVTSIFFGKGPNEVLRFF-SFLSLY*WNIYIQMDLVLD*KIFFV 228
           L + +NR +M S +ND+V+SIFFGKGP E LRFF S   +   N+Y +    +  + F+V
Sbjct: 574 LDVDYNRDLMQSIINDVVSSIFFGKGPIEALRFFDSVQPMLMENLYTE-GFSVGLEDFYV 632

Query: 227 PNEVLDSIHT*IHNVSPLLYYLRSSYNELIELQLEKHIRHVTMPVASFILKSSAMGNLID 48
           P E++ +    I   S +LY +R S+NELI LQLE+ IR + +P+A+ ILKSSA+G LID
Sbjct: 633 PKEIIQNCEARIQEYSSILYRMRESHNELIALQLERQIRSLRVPIANQILKSSAIGYLID 692

Query: 47  SKSDSAINK 21
           SKS+SAINK
Sbjct: 693 SKSESAINK 701



 Score = 73.6 bits (179), Expect = 6e-12
 Identities = 49/120 (40%), Positives = 59/120 (49%), Gaps = 17/120 (14%)
 Frame = -3

Query: 540 YFFNRAAAQQLALYFCGNLPNPALLRAQNPGPLWTILQLLQTALPLNFDF**GHYVICP* 361
           YFF RAA QQLA++  G LP PALLRAQ+   LWT+LQLLQ +LP  FD     + I   
Sbjct: 512 YFFGRAATQQLAMFVSGVLPIPALLRAQSSDSLWTVLQLLQISLPPKFDCCGERHNIWQS 571

Query: 360 *YCHF-----------------YLLWEGS*RGFEVFFFP*PILMEYLYSNGFSAGLEDFF 232
                                     +G       F    P+LME LY+ GFS GLEDF+
Sbjct: 572 QILDVDYNRDLMQSIINDVVSSIFFGKGPIEALRFFDSVQPMLMENLYTEGFSVGLEDFY 631


>XP_018849434.1 PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X2
           [Juglans regia]
          Length = 1840

 Score =  113 bits (283), Expect = 7e-26
 Identities = 66/129 (51%), Positives = 91/129 (70%), Gaps = 1/129 (0%)
 Frame = -1

Query: 404 LILTFNRVIMSSALNDIVTSIFFGKGPNEVLRFFSFLS-LY*WNIYIQMDLVLD*KIFFV 228
           L + FN  ++SS +N+IVTSIFF KGP EVL+FF+ L  L   NI+ +    +    F +
Sbjct: 478 LKIDFNGDVISSVVNEIVTSIFFEKGPEEVLKFFNSLQPLLMENIFAE-GFSVGLNDFSI 536

Query: 227 PNEVLDSIHT*IHNVSPLLYYLRSSYNELIELQLEKHIRHVTMPVASFILKSSAMGNLID 48
             E + +I   I ++SPLLY+LR +YNEL+ELQLE  I+ V +PV +FILK SA+G+L+D
Sbjct: 537 NREDIQNIQKNIQSISPLLYHLRETYNELVELQLENRIKDVKVPVTNFILK-SALGDLMD 595

Query: 47  SKSDSAINK 21
           SK+DSAINK
Sbjct: 596 SKNDSAINK 604



 Score = 66.6 bits (161), Expect = 1e-09
 Identities = 43/119 (36%), Positives = 58/119 (48%), Gaps = 17/119 (14%)
 Frame = -3

Query: 540 YFFNRAAAQQLALYFCGNLPNPALLRAQNPGPLWTILQLLQTALPLNFDF**GHYVICP* 361
           YF +R+AAQQLA++   +LP PALL+  +  P WT LQ+LQTALP  FD     Y+I   
Sbjct: 416 YFLDRSAAQQLAMFASSSLPRPALLKVHSAAPYWTALQILQTALPACFDCCGETYLISQS 475

Query: 360 *YCHF-----------------YLLWEGS*RGFEVFFFP*PILMEYLYSNGFSAGLEDF 235
                                     +G     + F    P+LME +++ GFS GL DF
Sbjct: 476 DVLKIDFNGDVISSVVNEIVTSIFFEKGPEEVLKFFNSLQPLLMENIFAEGFSVGLNDF 534


>XP_018849433.1 PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X1
           [Juglans regia]
          Length = 1932

 Score =  113 bits (283), Expect = 7e-26
 Identities = 66/129 (51%), Positives = 91/129 (70%), Gaps = 1/129 (0%)
 Frame = -1

Query: 404 LILTFNRVIMSSALNDIVTSIFFGKGPNEVLRFFSFLS-LY*WNIYIQMDLVLD*KIFFV 228
           L + FN  ++SS +N+IVTSIFF KGP EVL+FF+ L  L   NI+ +    +    F +
Sbjct: 570 LKIDFNGDVISSVVNEIVTSIFFEKGPEEVLKFFNSLQPLLMENIFAE-GFSVGLNDFSI 628

Query: 227 PNEVLDSIHT*IHNVSPLLYYLRSSYNELIELQLEKHIRHVTMPVASFILKSSAMGNLID 48
             E + +I   I ++SPLLY+LR +YNEL+ELQLE  I+ V +PV +FILK SA+G+L+D
Sbjct: 629 NREDIQNIQKNIQSISPLLYHLRETYNELVELQLENRIKDVKVPVTNFILK-SALGDLMD 687

Query: 47  SKSDSAINK 21
           SK+DSAINK
Sbjct: 688 SKNDSAINK 696



 Score = 66.6 bits (161), Expect = 1e-09
 Identities = 43/119 (36%), Positives = 58/119 (48%), Gaps = 17/119 (14%)
 Frame = -3

Query: 540 YFFNRAAAQQLALYFCGNLPNPALLRAQNPGPLWTILQLLQTALPLNFDF**GHYVICP* 361
           YF +R+AAQQLA++   +LP PALL+  +  P WT LQ+LQTALP  FD     Y+I   
Sbjct: 508 YFLDRSAAQQLAMFASSSLPRPALLKVHSAAPYWTALQILQTALPACFDCCGETYLISQS 567

Query: 360 *YCHF-----------------YLLWEGS*RGFEVFFFP*PILMEYLYSNGFSAGLEDF 235
                                     +G     + F    P+LME +++ GFS GL DF
Sbjct: 568 DVLKIDFNGDVISSVVNEIVTSIFFEKGPEEVLKFFNSLQPLLMENIFAEGFSVGLNDF 626


>XP_016447372.1 PREDICTED: DNA-directed RNA polymerase V subunit 1-like, partial
           [Nicotiana tabacum]
          Length = 342

 Score =  108 bits (271), Expect = 3e-25
 Identities = 56/126 (44%), Positives = 83/126 (65%)
 Frame = -1

Query: 398 LTFNRVIMSSALNDIVTSIFFGKGPNEVLRFFSFLSLY*WNIYIQMDLVLD*KIFFVPNE 219
           + +N+ ++SS LND++TSI+F KGPN+VL+FF+ L              +  + F+    
Sbjct: 166 IEYNKDLLSSILNDVITSIYFMKGPNDVLKFFNSLQPLLMENLCTEGFSVSLRDFYTSKA 225

Query: 218 VLDSIHT*IHNVSPLLYYLRSSYNELIELQLEKHIRHVTMPVASFILKSSAMGNLIDSKS 39
           V D I   +  +S LL++LRSSYNE +E+QLE H+R+  +PV  F+ KSS +G LIDSKS
Sbjct: 226 VRDGIQERVQCMSKLLHHLRSSYNESVEVQLEHHLRNEKLPVIDFVHKSSGIGVLIDSKS 285

Query: 38  DSAINK 21
           +SA+NK
Sbjct: 286 ESALNK 291



 Score = 55.8 bits (133), Expect = 5e-06
 Identities = 41/123 (33%), Positives = 57/123 (46%), Gaps = 17/123 (13%)
 Frame = -3

Query: 540 YFFNRAAAQQLALYFCGNLPNPALLRAQNPGPLWTILQLLQTALPLNFDF**GHYVICP* 361
           YFF+R AAQQLA++    LP+PAL+  +  G +WT LQ+L TALP   D     + I   
Sbjct: 102 YFFDREAAQQLAMFLQMALPDPALVDVRKSGTMWTALQILGTALPDGLDSCGETHTIGKS 161

Query: 360 *YCHF-----------------YLLWEGS*RGFEVFFFP*PILMEYLYSNGFSAGLEDFF 232
            +                        +G     + F    P+LME L + GFS  L DF+
Sbjct: 162 QFLGIEYNKDLLSSILNDVITSIYFMKGPNDVLKFFNSLQPLLMENLCTEGFSVSLRDFY 221

Query: 231 CSE 223
            S+
Sbjct: 222 TSK 224


>XP_010095982.1 DNA-directed RNA polymerase E subunit 1 [Morus notabilis]
           EXB62675.1 DNA-directed RNA polymerase E subunit 1
           [Morus notabilis]
          Length = 2054

 Score =  111 bits (277), Expect = 5e-25
 Identities = 69/129 (53%), Positives = 86/129 (66%), Gaps = 1/129 (0%)
 Frame = -1

Query: 404 LILTFNRVIMSSALNDIVTSIFFGKGPNEVLRFFSFLS-LY*WNIYIQMDLVLD*KIFFV 228
           L+L FNR +  S +NDI  SI   KG  EVL+FF+ L  L   NI+ Q    +  + F +
Sbjct: 574 LVLDFNRDV--SVINDIGASICSEKGSEEVLKFFNALQPLLMENIFAQ-GFSVGLEDFSI 630

Query: 227 PNEVLDSIHT*IHNVSPLLYYLRSSYNELIELQLEKHIRHVTMPVASFILKSSAMGNLID 48
             EV+ +I   I  +SPLLY+LRS+YNEL+ELQLE  IR    PV +FILKSS+MGNLID
Sbjct: 631 SQEVIKNITKDIQLISPLLYHLRSTYNELVELQLENQIRFAKAPVTNFILKSSSMGNLID 690

Query: 47  SKSDSAINK 21
            KSDSAINK
Sbjct: 691 PKSDSAINK 699



 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 41/124 (33%), Positives = 59/124 (47%), Gaps = 18/124 (14%)
 Frame = -3

Query: 540 YFFNRAAAQQLALYFCGNLPNPALLRAQNPGPLWTILQLLQTALPLNFDF**GHYVICP* 361
           YF ++ AAQQL ++   +LP PA     +  P WT LQ+LQTALP + D     ++I   
Sbjct: 512 YFMDKIAAQQLVMFASSSLPQPAFWLTHSGDPFWTALQVLQTALPTSLDCYGDRFLIKG- 570

Query: 360 *YCHFYLL------------------WEGS*RGFEVFFFP*PILMEYLYSNGFSAGLEDF 235
                 +L                   +GS    + F    P+LME +++ GFS GLEDF
Sbjct: 571 --SDILVLDFNRDVSVINDIGASICSEKGSEEVLKFFNALQPLLMENIFAQGFSVGLEDF 628

Query: 234 FCSE 223
             S+
Sbjct: 629 SISQ 632


>XP_010032299.1 PREDICTED: DNA-directed RNA polymerase V subunit 1 [Eucalyptus
           grandis] KCW51715.1 hypothetical protein EUGRSUZ_J01182
           [Eucalyptus grandis]
          Length = 1814

 Score =  109 bits (273), Expect = 2e-24
 Identities = 60/130 (46%), Positives = 91/130 (70%), Gaps = 2/130 (1%)
 Frame = -1

Query: 404 LILTFNRVIMSSALNDIVTSIFFGKGPNEVLRFFSFLS-LY*WNIYIQ-MDLVLD*KIFF 231
           L + ++R  +   +++IVTSIFF K P EVL+FF  L  L   N++ +   + L+   F+
Sbjct: 570 LDVDYSREFIVPMISEIVTSIFFEKSPVEVLKFFDALQPLLMENLFTEGFSVCLE--DFY 627

Query: 230 VPNEVLDSIHT*IHNVSPLLYYLRSSYNELIELQLEKHIRHVTMPVASFILKSSAMGNLI 51
           +P  ++  I   I  +SPLLY+LR+++NEL++LQLE H+R   +P++ FILKSSA+G+L+
Sbjct: 628 IPQSMIQDIQKNIQVISPLLYHLRTTHNELVQLQLENHLRLAKLPLSRFILKSSALGDLV 687

Query: 50  DSKSDSAINK 21
           DSKSDSAINK
Sbjct: 688 DSKSDSAINK 697



 Score = 67.8 bits (164), Expect = 6e-10
 Identities = 46/120 (38%), Positives = 64/120 (53%), Gaps = 17/120 (14%)
 Frame = -3

Query: 540 YFFNRAAAQQLALYFCGNLPNPALLRAQNPGPLWTILQLLQTALPLNFDF**GHYVI--- 370
           YFF++ AAQQLA++   +LP+PALL+A    P WT LQ+LQTALP  F+     Y+I   
Sbjct: 508 YFFDKLAAQQLAMFVSSDLPHPALLKAHQFCPTWTALQMLQTALPAGFNCCGDKYLISKS 567

Query: 369 --CP**YCHFYLLWEGS*RGFEVFFFP*PI------------LMEYLYSNGFSAGLEDFF 232
                 Y   +++   S     +FF   P+            LME L++ GFS  LEDF+
Sbjct: 568 DLLDVDYSREFIVPMISEIVTSIFFEKSPVEVLKFFDALQPLLMENLFTEGFSVCLEDFY 627


>OAY53390.1 hypothetical protein MANES_04G159600 [Manihot esculenta]
          Length = 1937

 Score =  109 bits (273), Expect = 2e-24
 Identities = 57/124 (45%), Positives = 80/124 (64%)
 Frame = -1

Query: 392 FNRVIMSSALNDIVTSIFFGKGPNEVLRFFSFLSLY*WNIYIQMDLVLD*KIFFVPNEVL 213
           F+R  + + +N++V SIFF KGP+ V +FF+ L              +D K F++    +
Sbjct: 574 FSRDSVQAIINEVVISIFFEKGPDAVFKFFNSLQPLLMENMFSEGFSVDLKDFYIFRAAM 633

Query: 212 DSIHT*IHNVSPLLYYLRSSYNELIELQLEKHIRHVTMPVASFILKSSAMGNLIDSKSDS 33
           +SIH     +SPLL +LRS YNEL+ELQLE HIR+  +PV  FIL+SS++G LID KSDS
Sbjct: 634 ESIHRDFKVISPLLSHLRSRYNELVELQLENHIRYAKLPVEEFILRSSSLGELIDCKSDS 693

Query: 32  AINK 21
           A+ K
Sbjct: 694 AMTK 697



 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 43/119 (36%), Positives = 58/119 (48%), Gaps = 17/119 (14%)
 Frame = -3

Query: 537 FFNRAAAQQLALYFCGNLPNPALLRAQNPGPLWTILQLLQTALPLNFDF**GHYVICP** 358
           F N+AAAQQLAL+   +LP PAL +  + GP WT  Q+LQ ALP  FD     Y+I    
Sbjct: 509 FLNKAAAQQLALFVSSSLPQPALRKVHHFGPFWTAPQILQMALPSLFDCIGERYLISEGD 568

Query: 357 YCHF-----------------YLLWEGS*RGFEVFFFP*PILMEYLYSNGFSAGLEDFF 232
           +                        +G    F+ F    P+LME ++S GFS  L+DF+
Sbjct: 569 FVKVDFSRDSVQAIINEVVISIFFEKGPDAVFKFFNSLQPLLMENMFSEGFSVDLKDFY 627


>XP_018632630.1 PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X10
            [Nicotiana tomentosiformis]
          Length = 1955

 Score =  108 bits (271), Expect = 3e-24
 Identities = 56/126 (44%), Positives = 83/126 (65%)
 Frame = -1

Query: 398  LTFNRVIMSSALNDIVTSIFFGKGPNEVLRFFSFLSLY*WNIYIQMDLVLD*KIFFVPNE 219
            + +N+ ++SS LND++TSI+F KGPN+VL+FF+ L              +  + F+    
Sbjct: 628  IEYNKDLLSSILNDVITSIYFMKGPNDVLKFFNSLQPLLMENLCTEGFSVSLRDFYTSKA 687

Query: 218  VLDSIHT*IHNVSPLLYYLRSSYNELIELQLEKHIRHVTMPVASFILKSSAMGNLIDSKS 39
            V D I   +  +S LL++LRSSYNE +E+QLE H+R+  +PV  F+ KSS +G LIDSKS
Sbjct: 688  VRDGIQERVQCMSKLLHHLRSSYNESVEVQLEHHLRNEKLPVIDFVHKSSGIGVLIDSKS 747

Query: 38   DSAINK 21
            +SA+NK
Sbjct: 748  ESALNK 753



 Score = 55.8 bits (133), Expect = 7e-06
 Identities = 41/123 (33%), Positives = 57/123 (46%), Gaps = 17/123 (13%)
 Frame = -3

Query: 540 YFFNRAAAQQLALYFCGNLPNPALLRAQNPGPLWTILQLLQTALPLNFDF**GHYVICP* 361
           YFF+R AAQQLA++    LP+PAL+  +  G +WT LQ+L TALP   D     + I   
Sbjct: 564 YFFDREAAQQLAMFLQMALPDPALVDVRKSGTMWTALQILGTALPDGLDSCGETHTIGKS 623

Query: 360 *YCHF-----------------YLLWEGS*RGFEVFFFP*PILMEYLYSNGFSAGLEDFF 232
            +                        +G     + F    P+LME L + GFS  L DF+
Sbjct: 624 QFLGIEYNKDLLSSILNDVITSIYFMKGPNDVLKFFNSLQPLLMENLCTEGFSVSLRDFY 683

Query: 231 CSE 223
            S+
Sbjct: 684 TSK 686


>KMT17107.1 hypothetical protein BVRB_2g041610 [Beta vulgaris subsp. vulgaris]
          Length = 1973

 Score =  108 bits (271), Expect = 3e-24
 Identities = 63/129 (48%), Positives = 88/129 (68%), Gaps = 1/129 (0%)
 Frame = -1

Query: 404 LILTFNRVIMSSALNDIVTSIFFGKGPNEVLRFFSFLS-LY*WNIYIQMDLVLD*KIFFV 228
           L L FNR +M+S +NDI+ ++FF K P + + FF  L  L   N++ +   V     FF 
Sbjct: 455 LKLDFNRDVMASVINDILAALFFNKSPKDAMDFFDSLQPLLMENLFAEGFSVGLDDFFFD 514

Query: 227 PNEVLDSIHT*IHNVSPLLYYLRSSYNELIELQLEKHIRHVTMPVASFILKSSAMGNLID 48
            +E+ ++ H  I ++S LL  LRSS+NEL+ LQ E HIR + +PVA+FILKSSA+GNLID
Sbjct: 515 MSELENTQHD-IQDLSSLLLQLRSSFNELVHLQFESHIRQLKVPVANFILKSSALGNLID 573

Query: 47  SKSDSAINK 21
           S+SDSAI+K
Sbjct: 574 SRSDSAIDK 582



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 47/133 (35%), Positives = 61/133 (45%), Gaps = 30/133 (22%)
 Frame = -3

Query: 540 YFFNRAAAQQLALYFCGNLPNPALLRAQNPGPLWTILQLLQTALPLNFDF**GHYVICP* 361
           YF +RA+AQQLA+Y    LP+PAL +A + GP WT  Q+LQTALP  F+           
Sbjct: 393 YFLDRASAQQLAMYASNLLPSPALWKACSSGPRWTAQQVLQTALPPRFE----------- 441

Query: 360 *YCH-----------------------------FYLLWEGS*RGFEVFFFP-*PILMEYL 271
             CH                               L +  S +    FF    P+LME L
Sbjct: 442 --CHGDRLLIRDSEVLKLDFNRDVMASVINDILAALFFNKSPKDAMDFFDSLQPLLMENL 499

Query: 270 YSNGFSAGLEDFF 232
           ++ GFS GL+DFF
Sbjct: 500 FAEGFSVGLDDFF 512


>XP_018632629.1 PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X9
            [Nicotiana tomentosiformis]
          Length = 1979

 Score =  108 bits (271), Expect = 3e-24
 Identities = 56/126 (44%), Positives = 83/126 (65%)
 Frame = -1

Query: 398  LTFNRVIMSSALNDIVTSIFFGKGPNEVLRFFSFLSLY*WNIYIQMDLVLD*KIFFVPNE 219
            + +N+ ++SS LND++TSI+F KGPN+VL+FF+ L              +  + F+    
Sbjct: 628  IEYNKDLLSSILNDVITSIYFMKGPNDVLKFFNSLQPLLMENLCTEGFSVSLRDFYTSKA 687

Query: 218  VLDSIHT*IHNVSPLLYYLRSSYNELIELQLEKHIRHVTMPVASFILKSSAMGNLIDSKS 39
            V D I   +  +S LL++LRSSYNE +E+QLE H+R+  +PV  F+ KSS +G LIDSKS
Sbjct: 688  VRDGIQERVQCMSKLLHHLRSSYNESVEVQLEHHLRNEKLPVIDFVHKSSGIGVLIDSKS 747

Query: 38   DSAINK 21
            +SA+NK
Sbjct: 748  ESALNK 753



 Score = 55.8 bits (133), Expect = 7e-06
 Identities = 41/123 (33%), Positives = 57/123 (46%), Gaps = 17/123 (13%)
 Frame = -3

Query: 540 YFFNRAAAQQLALYFCGNLPNPALLRAQNPGPLWTILQLLQTALPLNFDF**GHYVICP* 361
           YFF+R AAQQLA++    LP+PAL+  +  G +WT LQ+L TALP   D     + I   
Sbjct: 564 YFFDREAAQQLAMFLQMALPDPALVDVRKSGTMWTALQILGTALPDGLDSCGETHTIGKS 623

Query: 360 *YCHF-----------------YLLWEGS*RGFEVFFFP*PILMEYLYSNGFSAGLEDFF 232
            +                        +G     + F    P+LME L + GFS  L DF+
Sbjct: 624 QFLGIEYNKDLLSSILNDVITSIYFMKGPNDVLKFFNSLQPLLMENLCTEGFSVSLRDFY 683

Query: 231 CSE 223
            S+
Sbjct: 684 TSK 686