BLASTX nr result
ID: Panax24_contig00031522
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax24_contig00031522
(772 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
YP_009266550.1 RpoA (chloroplast) [Panax stipuleanatus] ANK78362... 473 e-168
YP_086997.1 RNA polymerase alpha subunit [Panax ginseng] YP_0091... 471 e-165
YP_009191884.1 RNA polymerase alpha subunit (chloroplast) [Panax... 469 e-165
YP_009241083.1 RNA polymerase alpha subunit (chloroplast) [Schef... 468 e-165
ANS71800.1 RpoA (chloroplast) [Eleutherococcus sessiliflorus] 468 e-164
YP_009121205.1 RNA polymerase alpha subunit (chloroplast) [Panax... 468 e-164
YP_009161711.1 RNA polymerase alpha subunit (chloroplast) [Fatsi... 468 e-164
YP_009159569.1 RpoA (chloroplast) [Dendropanax morbifer] AKQ2075... 468 e-164
ANS71887.1 RpoA (chloroplast) [Eleutherococcus gracilistylus] 467 e-164
YP_004935584.1 RNA polymerase alpha subunit (chloroplast) [Eleut... 467 e-164
YP_008815149.1 RNA polymerase alpha subunit (chloroplast) [Schef... 466 e-164
YP_009191971.1 RNA polymerase alpha subunit (chloroplast) [Panax... 467 e-164
YP_008815062.1 RNA polymerase alpha subunit (chloroplast) [Metap... 466 e-164
YP_009122757.1 RNA polymerase alpha subunit (chloroplast) [Dendr... 466 e-163
YP_008814888.1 RNA polymerase alpha subunit (chloroplast) [Arali... 463 e-162
ANS71974.1 RpoA (chloroplast) [Aralia elata] 463 e-162
YP_008815236.1 RNA polymerase alpha subunit (chloroplast) [Kalop... 462 e-162
AKZ23800.1 RNA polymerase alpha subunit (plastid) [Conium macula... 451 e-157
YP_009338288.1 RNA polymerase alpha subunit (chloroplast) [Pleur... 448 e-157
ADK89810.1 RNA polymerase alpha subunit (chloroplast) [Tiedemann... 448 e-157
>YP_009266550.1 RpoA (chloroplast) [Panax stipuleanatus] ANK78362.1 RpoA
(chloroplast) [Panax japonicus var. bipinnatifidus]
ANK78448.1 RpoA (chloroplast) [Panax stipuleanatus]
Length = 275
Score = 473 bits (1218), Expect = e-168
Identities = 232/249 (93%), Positives = 238/249 (95%)
Frame = -2
Query: 771 LYYGRFILSPLMKGQADTIGIAMRRALLGEIEGTCITRAKSEKIPHEYSTLVGIQESVHE 592
LYYGRFI+SPLMKGQADTIGIAMRRALLGEIEGTCITRAKSEKIPHEYSTLVGIQESVHE
Sbjct: 27 LYYGRFIMSPLMKGQADTIGIAMRRALLGEIEGTCITRAKSEKIPHEYSTLVGIQESVHE 86
Query: 591 ILMNLKEIILKSNLYGTCDASICIRGPGYVTAQDIISPPYVEIVDNTQHIASLAEPIDLC 412
ILMNLKEIIL+SNLYGTCDASICI+GPGYVTAQDIISPPYVEIVDNTQHIASLAEPIDLC
Sbjct: 87 ILMNLKEIILRSNLYGTCDASICIKGPGYVTAQDIISPPYVEIVDNTQHIASLAEPIDLC 146
Query: 411 IGLQIERNRGYLIKTPNNNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWT 232
IGLQIERNRGYLIKTPNNNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWT
Sbjct: 147 IGLQIERNRGYLIKTPNNNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWT 206
Query: 231 NGSLTPKEALHQASRNLIDLFIPFLHTEEENLHLADNQHTVPLPPFTFHEXXXXXXXXXX 52
NGSLTPKEALH+ASRNLIDLFIPFLHTEEENLHLADNQHTVPLPPFTFH+
Sbjct: 207 NGSLTPKEALHEASRNLIDLFIPFLHTEEENLHLADNQHTVPLPPFTFHDKLTKLRKNKK 266
Query: 51 XNSIEIDFY 25
NSIE+DFY
Sbjct: 267 KNSIEMDFY 275
>YP_086997.1 RNA polymerase alpha subunit [Panax ginseng] YP_009155459.1 RpoA
(chloroplast) [Panax quinquefolius] Q68RX5.1 RecName:
Full=DNA-directed RNA polymerase subunit alpha;
Short=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit alpha; Short=RNA polymerase subunit alpha
AAT98540.1 RNA polymerase alpha subunit (chloroplast)
[Panax ginseng] AGM15014.1 RNA polymerase alpha subunit
(chloroplast) [Panax ginseng] AGM15100.1 RNA polymerase
alpha subunit (chloroplast) [Panax ginseng] AGM15186.1
RNA polymerase alpha subunit (chloroplast) [Panax
ginseng] AGW31946.1 RNA polymerase alpha subunit
(chloroplast) [Panax ginseng] AHJ81023.1 RNA polymerase
alpha subunit (mitochondrion) [Panax ginseng] AIX97920.1
RpoA (chloroplast) [Panax ginseng] AIX98007.1 RpoA
(chloroplast) [Panax ginseng] AIX98090.1 RpoA
(chloroplast) [Panax ginseng] AIX98175.1 RpoA
(chloroplast) [Panax ginseng] AIX98260.1 RpoA
(chloroplast) [Panax ginseng] AIX98345.1 RpoA
(chloroplast) [Panax ginseng] AIX98430.1 RpoA
(chloroplast) [Panax ginseng] AIX98515.1 RpoA
(chloroplast) [Panax ginseng] AIX98600.1 RpoA
(chloroplast) [Panax ginseng] AJC99519.1 RpoA
(chloroplast) [Panax quinquefolius] AJC99604.1 RpoA
(chloroplast) [Panax ginseng] AJC99689.1 RpoA
(chloroplast) [Panax ginseng] AKZ29779.1 RNA polymerase
alpha subunit (chloroplast) [Panax quinquefolius]
Length = 353
Score = 471 bits (1211), Expect = e-165
Identities = 230/230 (100%), Positives = 230/230 (100%)
Frame = -2
Query: 771 LYYGRFILSPLMKGQADTIGIAMRRALLGEIEGTCITRAKSEKIPHEYSTLVGIQESVHE 592
LYYGRFILSPLMKGQADTIGIAMRRALLGEIEGTCITRAKSEKIPHEYSTLVGIQESVHE
Sbjct: 27 LYYGRFILSPLMKGQADTIGIAMRRALLGEIEGTCITRAKSEKIPHEYSTLVGIQESVHE 86
Query: 591 ILMNLKEIILKSNLYGTCDASICIRGPGYVTAQDIISPPYVEIVDNTQHIASLAEPIDLC 412
ILMNLKEIILKSNLYGTCDASICIRGPGYVTAQDIISPPYVEIVDNTQHIASLAEPIDLC
Sbjct: 87 ILMNLKEIILKSNLYGTCDASICIRGPGYVTAQDIISPPYVEIVDNTQHIASLAEPIDLC 146
Query: 411 IGLQIERNRGYLIKTPNNNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWT 232
IGLQIERNRGYLIKTPNNNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWT
Sbjct: 147 IGLQIERNRGYLIKTPNNNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWT 206
Query: 231 NGSLTPKEALHQASRNLIDLFIPFLHTEEENLHLADNQHTVPLPPFTFHE 82
NGSLTPKEALHQASRNLIDLFIPFLHTEEENLHLADNQHTVPLPPFTFHE
Sbjct: 207 NGSLTPKEALHQASRNLIDLFIPFLHTEEENLHLADNQHTVPLPPFTFHE 256
>YP_009191884.1 RNA polymerase alpha subunit (chloroplast) [Panax japonicus]
AKB99190.1 RNA polymerase alpha subunit (chloroplast)
[Panax japonicus]
Length = 353
Score = 469 bits (1208), Expect = e-165
Identities = 229/230 (99%), Positives = 230/230 (100%)
Frame = -2
Query: 771 LYYGRFILSPLMKGQADTIGIAMRRALLGEIEGTCITRAKSEKIPHEYSTLVGIQESVHE 592
LYYGRFILSPLMKGQADTIGIAMRRALLGEIEGTCITRAKSEKIPHEYSTLVGIQESVHE
Sbjct: 27 LYYGRFILSPLMKGQADTIGIAMRRALLGEIEGTCITRAKSEKIPHEYSTLVGIQESVHE 86
Query: 591 ILMNLKEIILKSNLYGTCDASICIRGPGYVTAQDIISPPYVEIVDNTQHIASLAEPIDLC 412
ILMNLKEIILKSNLYGTCDASICIRGPGYVTAQDIISPPYVEIVDNTQHIASLAEPIDLC
Sbjct: 87 ILMNLKEIILKSNLYGTCDASICIRGPGYVTAQDIISPPYVEIVDNTQHIASLAEPIDLC 146
Query: 411 IGLQIERNRGYLIKTPNNNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWT 232
IGLQIERNRGYLIKTPNNNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWT
Sbjct: 147 IGLQIERNRGYLIKTPNNNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWT 206
Query: 231 NGSLTPKEALHQASRNLIDLFIPFLHTEEENLHLADNQHTVPLPPFTFHE 82
NGSLTPKEALH+ASRNLIDLFIPFLHTEEENLHLADNQHTVPLPPFTFHE
Sbjct: 207 NGSLTPKEALHEASRNLIDLFIPFLHTEEENLHLADNQHTVPLPPFTFHE 256
>YP_009241083.1 RNA polymerase alpha subunit (chloroplast) [Schefflera heptaphylla]
AMK46170.1 RNA polymerase alpha subunit (chloroplast)
[Schefflera heptaphylla]
Length = 337
Score = 468 bits (1204), Expect = e-165
Identities = 227/230 (98%), Positives = 230/230 (100%)
Frame = -2
Query: 771 LYYGRFILSPLMKGQADTIGIAMRRALLGEIEGTCITRAKSEKIPHEYSTLVGIQESVHE 592
LYYGRFILSPLMKGQADTIGIAMRRALLGEIEGTCITRAKSEKIPHEYSTLVGIQESVHE
Sbjct: 27 LYYGRFILSPLMKGQADTIGIAMRRALLGEIEGTCITRAKSEKIPHEYSTLVGIQESVHE 86
Query: 591 ILMNLKEIILKSNLYGTCDASICIRGPGYVTAQDIISPPYVEIVDNTQHIASLAEPIDLC 412
ILMNLKEIIL+SNLYGTCDASIC+RGPGYVTAQDIISPPYVEIVDNTQHIASLAEPIDLC
Sbjct: 87 ILMNLKEIILRSNLYGTCDASICVRGPGYVTAQDIISPPYVEIVDNTQHIASLAEPIDLC 146
Query: 411 IGLQIERNRGYLIKTPNNNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWT 232
IGLQIERNRGYLIKTPNNNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWT
Sbjct: 147 IGLQIERNRGYLIKTPNNNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWT 206
Query: 231 NGSLTPKEALHQASRNLIDLFIPFLHTEEENLHLADNQHTVPLPPFTFHE 82
NGSLTPKEALH+ASRNLIDLFIPFLHTEEENLHLADNQHTVPLPPFTFHE
Sbjct: 207 NGSLTPKEALHEASRNLIDLFIPFLHTEEENLHLADNQHTVPLPPFTFHE 256
>ANS71800.1 RpoA (chloroplast) [Eleutherococcus sessiliflorus]
Length = 353
Score = 468 bits (1205), Expect = e-164
Identities = 227/230 (98%), Positives = 230/230 (100%)
Frame = -2
Query: 771 LYYGRFILSPLMKGQADTIGIAMRRALLGEIEGTCITRAKSEKIPHEYSTLVGIQESVHE 592
LYYGRFILSPLMKGQADTIGIAMRRALLGE+EGTCITRAKSEKIPHEYSTLVGIQESVHE
Sbjct: 27 LYYGRFILSPLMKGQADTIGIAMRRALLGELEGTCITRAKSEKIPHEYSTLVGIQESVHE 86
Query: 591 ILMNLKEIILKSNLYGTCDASICIRGPGYVTAQDIISPPYVEIVDNTQHIASLAEPIDLC 412
ILMNLKEIILKSNLYGTCDASIC+RGPGYVTAQDIISPPYVEIVDNTQHIASLAEPIDLC
Sbjct: 87 ILMNLKEIILKSNLYGTCDASICVRGPGYVTAQDIISPPYVEIVDNTQHIASLAEPIDLC 146
Query: 411 IGLQIERNRGYLIKTPNNNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWT 232
IGLQIERNRGYLIKTPNNNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWT
Sbjct: 147 IGLQIERNRGYLIKTPNNNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWT 206
Query: 231 NGSLTPKEALHQASRNLIDLFIPFLHTEEENLHLADNQHTVPLPPFTFHE 82
NGSLTPKEALH+ASRNLIDLFIPFLHTEEENLHLADNQHTVPLPPFTFHE
Sbjct: 207 NGSLTPKEALHEASRNLIDLFIPFLHTEEENLHLADNQHTVPLPPFTFHE 256
>YP_009121205.1 RNA polymerase alpha subunit (chloroplast) [Panax notoginseng]
AIA24359.1 RNA polymerase alpha subunit (chloroplast)
[Panax notoginseng] AKB99103.1 RNA polymerase alpha
subunit (chloroplast) [Panax notoginseng] AKG26632.1 RNA
polymerase alpha subunit (chloroplast) [Panax
notoginseng] AKU70808.1 RNA polymerase alpha subunit
(chloroplast) [Panax notoginseng]
Length = 353
Score = 468 bits (1205), Expect = e-164
Identities = 228/230 (99%), Positives = 230/230 (100%)
Frame = -2
Query: 771 LYYGRFILSPLMKGQADTIGIAMRRALLGEIEGTCITRAKSEKIPHEYSTLVGIQESVHE 592
LYYGRFILSPLMKGQADTIGIAMRRALLGEIEGTCITRAKSEKIPHEYSTLVGIQESVHE
Sbjct: 27 LYYGRFILSPLMKGQADTIGIAMRRALLGEIEGTCITRAKSEKIPHEYSTLVGIQESVHE 86
Query: 591 ILMNLKEIILKSNLYGTCDASICIRGPGYVTAQDIISPPYVEIVDNTQHIASLAEPIDLC 412
ILMNLKEIILKSNLYGTCDASICIRGPGYVTAQDIISPPYVEIVDNTQHIASLAEPIDLC
Sbjct: 87 ILMNLKEIILKSNLYGTCDASICIRGPGYVTAQDIISPPYVEIVDNTQHIASLAEPIDLC 146
Query: 411 IGLQIERNRGYLIKTPNNNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWT 232
IGLQIERNRGYLIKTPNNNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWT
Sbjct: 147 IGLQIERNRGYLIKTPNNNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWT 206
Query: 231 NGSLTPKEALHQASRNLIDLFIPFLHTEEENLHLADNQHTVPLPPFTFHE 82
NGSLTPKEALH+ASRNLIDLFIPFLHTEEENLHLADNQHTVPLPPFTFH+
Sbjct: 207 NGSLTPKEALHEASRNLIDLFIPFLHTEEENLHLADNQHTVPLPPFTFHD 256
>YP_009161711.1 RNA polymerase alpha subunit (chloroplast) [Fatsia japonica]
AKS10985.1 RNA polymerase alpha subunit (chloroplast)
[Fatsia japonica]
Length = 353
Score = 468 bits (1204), Expect = e-164
Identities = 227/230 (98%), Positives = 230/230 (100%)
Frame = -2
Query: 771 LYYGRFILSPLMKGQADTIGIAMRRALLGEIEGTCITRAKSEKIPHEYSTLVGIQESVHE 592
LYYGRFILSPLMKGQADTIGIAMRRALLGEIEGTCITRAKSEKIPHEYSTLVGIQESVHE
Sbjct: 27 LYYGRFILSPLMKGQADTIGIAMRRALLGEIEGTCITRAKSEKIPHEYSTLVGIQESVHE 86
Query: 591 ILMNLKEIILKSNLYGTCDASICIRGPGYVTAQDIISPPYVEIVDNTQHIASLAEPIDLC 412
ILMNLKEIIL+SNLYGTCDASIC+RGPGYVTAQDIISPPYVEIVDNTQHIASLAEPIDLC
Sbjct: 87 ILMNLKEIILRSNLYGTCDASICVRGPGYVTAQDIISPPYVEIVDNTQHIASLAEPIDLC 146
Query: 411 IGLQIERNRGYLIKTPNNNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWT 232
IGLQIERNRGYLIKTPNNNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWT
Sbjct: 147 IGLQIERNRGYLIKTPNNNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWT 206
Query: 231 NGSLTPKEALHQASRNLIDLFIPFLHTEEENLHLADNQHTVPLPPFTFHE 82
NGSLTPKEALH+ASRNLIDLFIPFLHTEEENLHLADNQHTVPLPPFTFHE
Sbjct: 207 NGSLTPKEALHEASRNLIDLFIPFLHTEEENLHLADNQHTVPLPPFTFHE 256
>YP_009159569.1 RpoA (chloroplast) [Dendropanax morbifer] AKQ20759.1 RpoA
(chloroplast) [Dendropanax morbifer]
Length = 353
Score = 468 bits (1204), Expect = e-164
Identities = 227/230 (98%), Positives = 230/230 (100%)
Frame = -2
Query: 771 LYYGRFILSPLMKGQADTIGIAMRRALLGEIEGTCITRAKSEKIPHEYSTLVGIQESVHE 592
LYYGRFILSPLMKGQADTIGIAMRRALLGEIEGTCITRAKSEKIPHEYSTLVGIQESVHE
Sbjct: 27 LYYGRFILSPLMKGQADTIGIAMRRALLGEIEGTCITRAKSEKIPHEYSTLVGIQESVHE 86
Query: 591 ILMNLKEIILKSNLYGTCDASICIRGPGYVTAQDIISPPYVEIVDNTQHIASLAEPIDLC 412
ILMNLKEIIL+SNLYGTCDASIC+RGPGYVTAQDIISPPYVEIVDNTQHIASLAEPIDLC
Sbjct: 87 ILMNLKEIILRSNLYGTCDASICVRGPGYVTAQDIISPPYVEIVDNTQHIASLAEPIDLC 146
Query: 411 IGLQIERNRGYLIKTPNNNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWT 232
IGLQIERNRGYLIKTPNNNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWT
Sbjct: 147 IGLQIERNRGYLIKTPNNNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWT 206
Query: 231 NGSLTPKEALHQASRNLIDLFIPFLHTEEENLHLADNQHTVPLPPFTFHE 82
NGSLTPKEALH+ASRNLIDLFIPFLHTEEENLHLADNQHTVPLPPFTFHE
Sbjct: 207 NGSLTPKEALHEASRNLIDLFIPFLHTEEENLHLADNQHTVPLPPFTFHE 256
>ANS71887.1 RpoA (chloroplast) [Eleutherococcus gracilistylus]
Length = 336
Score = 467 bits (1202), Expect = e-164
Identities = 226/230 (98%), Positives = 230/230 (100%)
Frame = -2
Query: 771 LYYGRFILSPLMKGQADTIGIAMRRALLGEIEGTCITRAKSEKIPHEYSTLVGIQESVHE 592
LYYGRFILSPLMKGQADTIGIAMRRALLGE+EGTCITRAKSEKIPHEYSTLVGIQESVHE
Sbjct: 27 LYYGRFILSPLMKGQADTIGIAMRRALLGELEGTCITRAKSEKIPHEYSTLVGIQESVHE 86
Query: 591 ILMNLKEIILKSNLYGTCDASICIRGPGYVTAQDIISPPYVEIVDNTQHIASLAEPIDLC 412
ILMNLKEIIL+SNLYGTCDASIC+RGPGYVTAQDIISPPYVEIVDNTQHIASLAEPIDLC
Sbjct: 87 ILMNLKEIILRSNLYGTCDASICVRGPGYVTAQDIISPPYVEIVDNTQHIASLAEPIDLC 146
Query: 411 IGLQIERNRGYLIKTPNNNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWT 232
IGLQIERNRGYLIKTPNNNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWT
Sbjct: 147 IGLQIERNRGYLIKTPNNNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWT 206
Query: 231 NGSLTPKEALHQASRNLIDLFIPFLHTEEENLHLADNQHTVPLPPFTFHE 82
NGSLTPKEALH+ASRNLIDLFIPFLHTEEENLHLADNQHTVPLPPFTFHE
Sbjct: 207 NGSLTPKEALHEASRNLIDLFIPFLHTEEENLHLADNQHTVPLPPFTFHE 256
>YP_004935584.1 RNA polymerase alpha subunit (chloroplast) [Eleutherococcus
senticosus] YP_008814975.1 RNA polymerase alpha subunit
(chloroplast) [Brassaiopsis hainla] AEO92651.1 RNA
polymerase alpha subunit (chloroplast) [Eleutherococcus
senticosus] AGG39074.1 RNA polymerase alpha subunit
(chloroplast) [Brassaiopsis hainla]
Length = 353
Score = 467 bits (1202), Expect = e-164
Identities = 226/230 (98%), Positives = 230/230 (100%)
Frame = -2
Query: 771 LYYGRFILSPLMKGQADTIGIAMRRALLGEIEGTCITRAKSEKIPHEYSTLVGIQESVHE 592
LYYGRFILSPLMKGQADTIGIAMRRALLGE+EGTCITRAKSEKIPHEYSTLVGIQESVHE
Sbjct: 27 LYYGRFILSPLMKGQADTIGIAMRRALLGELEGTCITRAKSEKIPHEYSTLVGIQESVHE 86
Query: 591 ILMNLKEIILKSNLYGTCDASICIRGPGYVTAQDIISPPYVEIVDNTQHIASLAEPIDLC 412
ILMNLKEIIL+SNLYGTCDASIC+RGPGYVTAQDIISPPYVEIVDNTQHIASLAEPIDLC
Sbjct: 87 ILMNLKEIILRSNLYGTCDASICVRGPGYVTAQDIISPPYVEIVDNTQHIASLAEPIDLC 146
Query: 411 IGLQIERNRGYLIKTPNNNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWT 232
IGLQIERNRGYLIKTPNNNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWT
Sbjct: 147 IGLQIERNRGYLIKTPNNNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWT 206
Query: 231 NGSLTPKEALHQASRNLIDLFIPFLHTEEENLHLADNQHTVPLPPFTFHE 82
NGSLTPKEALH+ASRNLIDLFIPFLHTEEENLHLADNQHTVPLPPFTFHE
Sbjct: 207 NGSLTPKEALHEASRNLIDLFIPFLHTEEENLHLADNQHTVPLPPFTFHE 256
>YP_008815149.1 RNA polymerase alpha subunit (chloroplast) [Schefflera delavayi]
AGG39248.1 RNA polymerase alpha subunit (chloroplast)
[Schefflera delavayi]
Length = 337
Score = 466 bits (1200), Expect = e-164
Identities = 226/230 (98%), Positives = 229/230 (99%)
Frame = -2
Query: 771 LYYGRFILSPLMKGQADTIGIAMRRALLGEIEGTCITRAKSEKIPHEYSTLVGIQESVHE 592
LYYGRFILSPLMKGQADTIGIAMRRALLGEIEGTCITRAKSEKIPHEYSTLVGIQESVHE
Sbjct: 27 LYYGRFILSPLMKGQADTIGIAMRRALLGEIEGTCITRAKSEKIPHEYSTLVGIQESVHE 86
Query: 591 ILMNLKEIILKSNLYGTCDASICIRGPGYVTAQDIISPPYVEIVDNTQHIASLAEPIDLC 412
ILMNLKEIIL+SNLYGTCDASIC+RGPGYVTAQDIISPPYVEIVDNTQHIASLAEPIDLC
Sbjct: 87 ILMNLKEIILRSNLYGTCDASICVRGPGYVTAQDIISPPYVEIVDNTQHIASLAEPIDLC 146
Query: 411 IGLQIERNRGYLIKTPNNNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWT 232
IGLQIERNRGYLIKTPNNNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWT
Sbjct: 147 IGLQIERNRGYLIKTPNNNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWT 206
Query: 231 NGSLTPKEALHQASRNLIDLFIPFLHTEEENLHLADNQHTVPLPPFTFHE 82
NGSLTPKEALH+ASRNLIDLFIPFLHTEEENLHL DNQHTVPLPPFTFHE
Sbjct: 207 NGSLTPKEALHEASRNLIDLFIPFLHTEEENLHLVDNQHTVPLPPFTFHE 256
>YP_009191971.1 RNA polymerase alpha subunit (chloroplast) [Panax vietnamensis]
AKB99277.1 RNA polymerase alpha subunit (chloroplast)
[Panax vietnamensis] AKB99364.1 RNA polymerase alpha
subunit (chloroplast) [Panax vietnamensis] AMR97480.1
RpoA (chloroplast) [Panax vietnamensis]
Length = 353
Score = 467 bits (1201), Expect = e-164
Identities = 228/230 (99%), Positives = 229/230 (99%)
Frame = -2
Query: 771 LYYGRFILSPLMKGQADTIGIAMRRALLGEIEGTCITRAKSEKIPHEYSTLVGIQESVHE 592
LYYGRFILSPLMKGQADTIGIAMRRALLGEIEGTCITRAKSEKIPHEYSTLVGIQESVHE
Sbjct: 27 LYYGRFILSPLMKGQADTIGIAMRRALLGEIEGTCITRAKSEKIPHEYSTLVGIQESVHE 86
Query: 591 ILMNLKEIILKSNLYGTCDASICIRGPGYVTAQDIISPPYVEIVDNTQHIASLAEPIDLC 412
ILMNLKEIILKSNLYGTCDASICIRGPGYVTAQDIISPPYVEIVDNTQHIASLAEPIDLC
Sbjct: 87 ILMNLKEIILKSNLYGTCDASICIRGPGYVTAQDIISPPYVEIVDNTQHIASLAEPIDLC 146
Query: 411 IGLQIERNRGYLIKTPNNNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWT 232
IGLQIERN GYLIKTPNNNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWT
Sbjct: 147 IGLQIERNLGYLIKTPNNNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWT 206
Query: 231 NGSLTPKEALHQASRNLIDLFIPFLHTEEENLHLADNQHTVPLPPFTFHE 82
NGSLTPKEALH+ASRNLIDLFIPFLHTEEENLHLADNQHTVPLPPFTFHE
Sbjct: 207 NGSLTPKEALHEASRNLIDLFIPFLHTEEENLHLADNQHTVPLPPFTFHE 256
>YP_008815062.1 RNA polymerase alpha subunit (chloroplast) [Metapanax delavayi]
AGG39161.1 RNA polymerase alpha subunit (chloroplast)
[Metapanax delavayi]
Length = 353
Score = 466 bits (1200), Expect = e-164
Identities = 226/230 (98%), Positives = 230/230 (100%)
Frame = -2
Query: 771 LYYGRFILSPLMKGQADTIGIAMRRALLGEIEGTCITRAKSEKIPHEYSTLVGIQESVHE 592
LYYGRFILSPLMKGQADTIGIAMRRALLGEIEGTCITRAKSEKIPHEYSTLVGIQESVHE
Sbjct: 27 LYYGRFILSPLMKGQADTIGIAMRRALLGEIEGTCITRAKSEKIPHEYSTLVGIQESVHE 86
Query: 591 ILMNLKEIILKSNLYGTCDASICIRGPGYVTAQDIISPPYVEIVDNTQHIASLAEPIDLC 412
ILMNLKEIIL+SNLYG+CDASIC+RGPGYVTAQDIISPPYVEIVDNTQHIASLAEPIDLC
Sbjct: 87 ILMNLKEIILRSNLYGSCDASICVRGPGYVTAQDIISPPYVEIVDNTQHIASLAEPIDLC 146
Query: 411 IGLQIERNRGYLIKTPNNNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWT 232
IGLQIERNRGYLIKTPNNNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWT
Sbjct: 147 IGLQIERNRGYLIKTPNNNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWT 206
Query: 231 NGSLTPKEALHQASRNLIDLFIPFLHTEEENLHLADNQHTVPLPPFTFHE 82
NGSLTPKEALH+ASRNLIDLFIPFLHTEEENLHLADNQHTVPLPPFTFHE
Sbjct: 207 NGSLTPKEALHEASRNLIDLFIPFLHTEEENLHLADNQHTVPLPPFTFHE 256
>YP_009122757.1 RNA polymerase alpha subunit (chloroplast) [Dendropanax dentiger]
AJK29874.1 RNA polymerase alpha subunit (chloroplast)
[Dendropanax dentiger]
Length = 353
Score = 466 bits (1198), Expect = e-163
Identities = 226/230 (98%), Positives = 229/230 (99%)
Frame = -2
Query: 771 LYYGRFILSPLMKGQADTIGIAMRRALLGEIEGTCITRAKSEKIPHEYSTLVGIQESVHE 592
LYYGRFILSPLMKGQADTIGIAMRRALLGEIEGTCITRAKSEKIPHEYSTLVGIQESVHE
Sbjct: 27 LYYGRFILSPLMKGQADTIGIAMRRALLGEIEGTCITRAKSEKIPHEYSTLVGIQESVHE 86
Query: 591 ILMNLKEIILKSNLYGTCDASICIRGPGYVTAQDIISPPYVEIVDNTQHIASLAEPIDLC 412
ILMNLKEIIL+SNLYGTCDASIC RGPGYVTAQDIISPPYVEIVDNTQHIASLAEPIDLC
Sbjct: 87 ILMNLKEIILRSNLYGTCDASICARGPGYVTAQDIISPPYVEIVDNTQHIASLAEPIDLC 146
Query: 411 IGLQIERNRGYLIKTPNNNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWT 232
IGLQIERNRGY+IKTPNNNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWT
Sbjct: 147 IGLQIERNRGYIIKTPNNNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWT 206
Query: 231 NGSLTPKEALHQASRNLIDLFIPFLHTEEENLHLADNQHTVPLPPFTFHE 82
NGSLTPKEALH+ASRNLIDLFIPFLHTEEENLHLADNQHTVPLPPFTFHE
Sbjct: 207 NGSLTPKEALHEASRNLIDLFIPFLHTEEENLHLADNQHTVPLPPFTFHE 256
>YP_008814888.1 RNA polymerase alpha subunit (chloroplast) [Aralia undulata]
AGG38987.1 RNA polymerase alpha subunit (chloroplast)
[Aralia undulata]
Length = 353
Score = 463 bits (1192), Expect = e-162
Identities = 226/230 (98%), Positives = 228/230 (99%)
Frame = -2
Query: 771 LYYGRFILSPLMKGQADTIGIAMRRALLGEIEGTCITRAKSEKIPHEYSTLVGIQESVHE 592
LYYGRFILSPLMKGQADTIGIAMRRALLGEIEGTCITRAKSEKIPHEYSTLVGIQESVHE
Sbjct: 27 LYYGRFILSPLMKGQADTIGIAMRRALLGEIEGTCITRAKSEKIPHEYSTLVGIQESVHE 86
Query: 591 ILMNLKEIILKSNLYGTCDASICIRGPGYVTAQDIISPPYVEIVDNTQHIASLAEPIDLC 412
ILMNLKEIIL+SNLYGTCDASICIRGPG VTAQDIISPPYVEIVDNTQHIASLAEPIDLC
Sbjct: 87 ILMNLKEIILRSNLYGTCDASICIRGPGNVTAQDIISPPYVEIVDNTQHIASLAEPIDLC 146
Query: 411 IGLQIERNRGYLIKTPNNNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWT 232
IGLQIERNRGYLIKTPNNNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWT
Sbjct: 147 IGLQIERNRGYLIKTPNNNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWT 206
Query: 231 NGSLTPKEALHQASRNLIDLFIPFLHTEEENLHLADNQHTVPLPPFTFHE 82
NGSLTPKEALH+ASRNLIDLFIPFLHTEEENLHL DNQHTVPLPPFTFHE
Sbjct: 207 NGSLTPKEALHEASRNLIDLFIPFLHTEEENLHLTDNQHTVPLPPFTFHE 256
>ANS71974.1 RpoA (chloroplast) [Aralia elata]
Length = 355
Score = 463 bits (1192), Expect = e-162
Identities = 226/230 (98%), Positives = 228/230 (99%)
Frame = -2
Query: 771 LYYGRFILSPLMKGQADTIGIAMRRALLGEIEGTCITRAKSEKIPHEYSTLVGIQESVHE 592
LYYGRFILSPLMKGQADTIGIAMRRALLGEIEGTCITRAKSEKIPHEYSTLVGIQESVHE
Sbjct: 27 LYYGRFILSPLMKGQADTIGIAMRRALLGEIEGTCITRAKSEKIPHEYSTLVGIQESVHE 86
Query: 591 ILMNLKEIILKSNLYGTCDASICIRGPGYVTAQDIISPPYVEIVDNTQHIASLAEPIDLC 412
ILMNLKEIIL+SNLYGTCDASICIRGPG VTAQDIISPPYVEIVDNTQHIASLAEPIDLC
Sbjct: 87 ILMNLKEIILRSNLYGTCDASICIRGPGNVTAQDIISPPYVEIVDNTQHIASLAEPIDLC 146
Query: 411 IGLQIERNRGYLIKTPNNNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWT 232
IGLQIERNRGYLIKTPNNNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWT
Sbjct: 147 IGLQIERNRGYLIKTPNNNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWT 206
Query: 231 NGSLTPKEALHQASRNLIDLFIPFLHTEEENLHLADNQHTVPLPPFTFHE 82
NGSLTPKEALH+ASRNLIDLFIPFLHTEEENLHL DNQHTVPLPPFTFHE
Sbjct: 207 NGSLTPKEALHEASRNLIDLFIPFLHTEEENLHLTDNQHTVPLPPFTFHE 256
>YP_008815236.1 RNA polymerase alpha subunit (chloroplast) [Kalopanax septemlobus]
AGG39335.1 RNA polymerase alpha subunit (chloroplast)
[Kalopanax septemlobus]
Length = 351
Score = 462 bits (1190), Expect = e-162
Identities = 225/230 (97%), Positives = 228/230 (99%)
Frame = -2
Query: 771 LYYGRFILSPLMKGQADTIGIAMRRALLGEIEGTCITRAKSEKIPHEYSTLVGIQESVHE 592
LYYGRFILSPLMKGQADTIGIAMRRALLGEIEGTCITRAKSEKIPHEYSTLVGIQESVHE
Sbjct: 27 LYYGRFILSPLMKGQADTIGIAMRRALLGEIEGTCITRAKSEKIPHEYSTLVGIQESVHE 86
Query: 591 ILMNLKEIILKSNLYGTCDASICIRGPGYVTAQDIISPPYVEIVDNTQHIASLAEPIDLC 412
ILMNLKEIIL+SNLYGTCDASIC+RGPGYVTAQDIISPPYVEIVDNTQHIASLAEPIDLC
Sbjct: 87 ILMNLKEIILRSNLYGTCDASICVRGPGYVTAQDIISPPYVEIVDNTQHIASLAEPIDLC 146
Query: 411 IGLQIERNRGYLIKTPNNNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWT 232
IGLQIERNRGYLIKTPNNNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWT
Sbjct: 147 IGLQIERNRGYLIKTPNNNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWT 206
Query: 231 NGSLTPKEALHQASRNLIDLFIPFLHTEEENLHLADNQHTVPLPPFTFHE 82
NGSLTPKEALH+ASRNLIDLFIPFLHTEEE LHLADNQHTVPLP FTFHE
Sbjct: 207 NGSLTPKEALHEASRNLIDLFIPFLHTEEETLHLADNQHTVPLPSFTFHE 256
>AKZ23800.1 RNA polymerase alpha subunit (plastid) [Conium maculatum]
Length = 353
Score = 451 bits (1159), Expect = e-157
Identities = 217/230 (94%), Positives = 226/230 (98%)
Frame = -2
Query: 771 LYYGRFILSPLMKGQADTIGIAMRRALLGEIEGTCITRAKSEKIPHEYSTLVGIQESVHE 592
LYYGRFILSPLMKGQADTIGIAMRRALLGEIEGTCITRAKSEKIPHEYSTLVGIQESVH+
Sbjct: 27 LYYGRFILSPLMKGQADTIGIAMRRALLGEIEGTCITRAKSEKIPHEYSTLVGIQESVHD 86
Query: 591 ILMNLKEIILKSNLYGTCDASICIRGPGYVTAQDIISPPYVEIVDNTQHIASLAEPIDLC 412
ILMNLKEI+L+SNLYGTCDASIC+RGPGYVTAQDII PPYVE+VDNTQHIASL EPI+L
Sbjct: 87 ILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQDIILPPYVEVVDNTQHIASLTEPIELH 146
Query: 411 IGLQIERNRGYLIKTPNNNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWT 232
IGLQIER+RGYLIKTPNNNFQDGSYPIDAVFMPVRNANHSIHSYGNGN+KQEILFLEIWT
Sbjct: 147 IGLQIERSRGYLIKTPNNNFQDGSYPIDAVFMPVRNANHSIHSYGNGNDKQEILFLEIWT 206
Query: 231 NGSLTPKEALHQASRNLIDLFIPFLHTEEENLHLADNQHTVPLPPFTFHE 82
NGSLTPKEALH+ASRNLIDLFIPFLHTEEENLHLADNQH VPLPPFTFHE
Sbjct: 207 NGSLTPKEALHEASRNLIDLFIPFLHTEEENLHLADNQHMVPLPPFTFHE 256
>YP_009338288.1 RNA polymerase alpha subunit (chloroplast) [Pleurospermum
camtschaticum] ANK36383.1 RNA polymerase alpha subunit
(chloroplast) [Pleurospermum camtschaticum]
Length = 343
Score = 448 bits (1153), Expect = e-157
Identities = 216/230 (93%), Positives = 225/230 (97%)
Frame = -2
Query: 771 LYYGRFILSPLMKGQADTIGIAMRRALLGEIEGTCITRAKSEKIPHEYSTLVGIQESVHE 592
LYYGRFI+SPLMKGQADTIGIAMRRALLGEIEGTCITRAKSEKIPHEYSTLVGIQESVH+
Sbjct: 27 LYYGRFIMSPLMKGQADTIGIAMRRALLGEIEGTCITRAKSEKIPHEYSTLVGIQESVHD 86
Query: 591 ILMNLKEIILKSNLYGTCDASICIRGPGYVTAQDIISPPYVEIVDNTQHIASLAEPIDLC 412
ILMNLKEI+L+SNLYGTCDASIC+RGPGYVTAQDII PPYVEIVDNTQHIASL EPI+L
Sbjct: 87 ILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQDIILPPYVEIVDNTQHIASLTEPIELY 146
Query: 411 IGLQIERNRGYLIKTPNNNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWT 232
IGLQIERNRGYLIKTPNNNFQDGSYPIDAVFMPVRNANHSIHSYGNGN KQEILFLEIWT
Sbjct: 147 IGLQIERNRGYLIKTPNNNFQDGSYPIDAVFMPVRNANHSIHSYGNGNYKQEILFLEIWT 206
Query: 231 NGSLTPKEALHQASRNLIDLFIPFLHTEEENLHLADNQHTVPLPPFTFHE 82
NGSLTPKEALH+ASRNLIDLFIPFLHT+EENLHLADNQH VPLPPFTFH+
Sbjct: 207 NGSLTPKEALHEASRNLIDLFIPFLHTKEENLHLADNQHMVPLPPFTFHD 256
>ADK89810.1 RNA polymerase alpha subunit (chloroplast) [Tiedemannia filiformis
subsp. greenmannii]
Length = 348
Score = 448 bits (1153), Expect = e-157
Identities = 218/248 (87%), Positives = 231/248 (93%)
Frame = -2
Query: 771 LYYGRFILSPLMKGQADTIGIAMRRALLGEIEGTCITRAKSEKIPHEYSTLVGIQESVHE 592
LYYGRFILSPLMKGQADTIG+AMRRALLGEIEGTCITRAKSEKIPHEYSTLVGIQESVH+
Sbjct: 27 LYYGRFILSPLMKGQADTIGVAMRRALLGEIEGTCITRAKSEKIPHEYSTLVGIQESVHD 86
Query: 591 ILMNLKEIILKSNLYGTCDASICIRGPGYVTAQDIISPPYVEIVDNTQHIASLAEPIDLC 412
ILMNLKE++L+SNLYGTCDASIC+RGPGYVTAQDII PPYVE+VDNTQHIASL EPI+LC
Sbjct: 87 ILMNLKEVVLRSNLYGTCDASICVRGPGYVTAQDIILPPYVEVVDNTQHIASLMEPIELC 146
Query: 411 IGLQIERNRGYLIKTPNNNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWT 232
I LQIERNRGYLIKTPNNNFQDGSY IDAVFMPVRNANHSIHSYGNGN+KQEILFLEIWT
Sbjct: 147 IVLQIERNRGYLIKTPNNNFQDGSYAIDAVFMPVRNANHSIHSYGNGNDKQEILFLEIWT 206
Query: 231 NGSLTPKEALHQASRNLIDLFIPFLHTEEENLHLADNQHTVPLPPFTFHEXXXXXXXXXX 52
NGSLTPKEALH+ASRNLIDLFIPFLHTEEENLHLADNQH VPLPP+TFH+
Sbjct: 207 NGSLTPKEALHEASRNLIDLFIPFLHTEEENLHLADNQHMVPLPPYTFHD-KLDKLRKKK 265
Query: 51 XNSIEIDF 28
+IEIDF
Sbjct: 266 KINIEIDF 273