BLASTX nr result

ID: Panax24_contig00031230 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00031230
         (548 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KZM94203.1 hypothetical protein DCAR_017446 [Daucus carota subsp...    55   2e-06
XP_017249133.1 PREDICTED: E3 ubiquitin-protein ligase RNF170-lik...    55   5e-06
JAU84127.1 hypothetical protein MP_TR1891_c4_g1_i1_g.5862, parti...    53   9e-06
XP_019242976.1 PREDICTED: E3 ubiquitin-protein ligase RNF170-lik...    54   9e-06
XP_009790569.1 PREDICTED: E3 ubiquitin-protein ligase RNF170-lik...    54   9e-06

>KZM94203.1 hypothetical protein DCAR_017446 [Daucus carota subsp. sativus]
          Length = 134

 Score = 54.7 bits (130), Expect = 2e-06
 Identities = 27/43 (62%), Positives = 28/43 (65%)
 Frame = +1

Query: 1   VDIIPEGVXXXXXXXXXXXXXXXCFLHVAALYRSVLVFRHGGS 129
           +DIIPEGV               CFLHVAALYRSVLVFRHGGS
Sbjct: 92  IDIIPEGVLGVIGLLDDFIIALICFLHVAALYRSVLVFRHGGS 134


>XP_017249133.1 PREDICTED: E3 ubiquitin-protein ligase RNF170-like [Daucus carota
           subsp. sativus]
          Length = 185

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 27/43 (62%), Positives = 28/43 (65%)
 Frame = +1

Query: 1   VDIIPEGVXXXXXXXXXXXXXXXCFLHVAALYRSVLVFRHGGS 129
           +DIIPEGV               CFLHVAALYRSVLVFRHGGS
Sbjct: 143 IDIIPEGVLGVIGLLDDFIIALICFLHVAALYRSVLVFRHGGS 185


>JAU84127.1 hypothetical protein MP_TR1891_c4_g1_i1_g.5862, partial [Noccaea
           caerulescens]
          Length = 139

 Score = 53.1 bits (126), Expect = 9e-06
 Identities = 27/43 (62%), Positives = 27/43 (62%)
 Frame = +1

Query: 1   VDIIPEGVXXXXXXXXXXXXXXXCFLHVAALYRSVLVFRHGGS 129
           VDIIPEGV               CFLHVAALYRSVL FRHGGS
Sbjct: 97  VDIIPEGVLGVVGLLDDLLIALICFLHVAALYRSVLYFRHGGS 139


>XP_019242976.1 PREDICTED: E3 ubiquitin-protein ligase RNF170-like [Nicotiana
           attenuata] OIT04277.1 hypothetical protein A4A49_11686
           [Nicotiana attenuata]
          Length = 185

 Score = 53.9 bits (128), Expect = 9e-06
 Identities = 27/43 (62%), Positives = 28/43 (65%)
 Frame = +1

Query: 1   VDIIPEGVXXXXXXXXXXXXXXXCFLHVAALYRSVLVFRHGGS 129
           VDIIPEGV               CFLHVAALYRSVL+FRHGGS
Sbjct: 143 VDIIPEGVLGIIGLLDDLIIMFICFLHVAALYRSVLLFRHGGS 185


>XP_009790569.1 PREDICTED: E3 ubiquitin-protein ligase RNF170-like [Nicotiana
           sylvestris] XP_016511563.1 PREDICTED: E3
           ubiquitin-protein ligase RNF170-like [Nicotiana tabacum]
          Length = 185

 Score = 53.9 bits (128), Expect = 9e-06
 Identities = 27/43 (62%), Positives = 28/43 (65%)
 Frame = +1

Query: 1   VDIIPEGVXXXXXXXXXXXXXXXCFLHVAALYRSVLVFRHGGS 129
           VDIIPEGV               CFLHVAALYRSVL+FRHGGS
Sbjct: 143 VDIIPEGVLGIIGLLDDLIIMFICFLHVAALYRSVLLFRHGGS 185


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