BLASTX nr result
ID: Panax24_contig00031170
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax24_contig00031170
(766 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KCW89268.1 hypothetical protein EUGRSUZ_A01563 [Eucalyptus grandis] 89 2e-19
XP_010101689.1 hypothetical protein L484_006809 [Morus notabilis... 79 4e-15
OAY24583.1 hypothetical protein MANES_17G026800, partial [Maniho... 77 1e-14
OMO96696.1 50S ribosomal protein L2, chloroplastic-like protein ... 75 2e-14
XP_010110759.1 50S ribosomal protein L2 [Morus notabilis] EXC280... 79 4e-14
KJB10645.1 hypothetical protein B456_001G213100 [Gossypium raimo... 67 1e-13
OMO84071.1 50S ribosomal protein L2, chloroplastic-like protein ... 73 1e-13
YP_009176044.1 ribosomal protein L2 (chloroplast) [Ficus racemos... 79 2e-13
KVH98858.1 hypothetical protein Ccrd_022915, partial [Cynara car... 74 5e-13
EEF47558.1 50S ribosomal protein L2, putative [Ricinus communis] 73 5e-13
XP_015572149.1 PREDICTED: 50S ribosomal protein L2, chloroplasti... 73 6e-13
KVG78743.1 Ribosomal protein L2, partial [Cynara cardunculus var... 71 1e-12
YP_009341838.1 ribosomal protein L2 (chloroplast) [Castanopsis c... 75 3e-12
KVI11497.1 Ribosomal protein L2, partial [Cynara cardunculus var... 73 5e-12
CDX91813.1 BnaC03g31150D [Brassica napus] 72 8e-12
CDY28606.1 BnaA06g19320D [Brassica napus] CDX95206.1 BnaC09g1664... 72 8e-12
YP_008592707.1 ribosomal protein L2 (chloroplast) [Berberis beal... 74 1e-11
KVI09018.1 cytochrome c assembly protein, partial [Cynara cardun... 72 1e-11
XP_015575033.1 PREDICTED: 50S ribosomal protein L2, chloroplasti... 70 2e-11
CDY21179.1 BnaA01g34100D [Brassica napus] 72 3e-11
>KCW89268.1 hypothetical protein EUGRSUZ_A01563 [Eucalyptus grandis]
Length = 77
Score = 89.4 bits (220), Expect = 2e-19
Identities = 42/47 (89%), Positives = 43/47 (91%)
Frame = +2
Query: 134 IYPTMKYHMGGYIGIQICRITHVMIFYILGLPVPSSGLCSSCSIQTE 274
IY MKY M GYIGIQICRITHVMIFYILGLPVPSSGLCSSCSIQT+
Sbjct: 31 IYCIMKYSMSGYIGIQICRITHVMIFYILGLPVPSSGLCSSCSIQTK 77
>XP_010101689.1 hypothetical protein L484_006809 [Morus notabilis] EXB89255.1
hypothetical protein L484_006809 [Morus notabilis]
Length = 97
Score = 78.6 bits (192), Expect = 4e-15
Identities = 37/37 (100%), Positives = 37/37 (100%)
Frame = -3
Query: 113 SSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGT 3
SSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGT
Sbjct: 27 SSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGT 63
>OAY24583.1 hypothetical protein MANES_17G026800, partial [Manihot esculenta]
Length = 95
Score = 77.0 bits (188), Expect = 1e-14
Identities = 36/42 (85%), Positives = 39/42 (92%)
Frame = -1
Query: 499 RYSNMEKTKLFQAPTEPEAPLLSKRRGRVIHISFDGQRRIES 374
RYSNMEK KLF APTEPEAPL+S+R GR+IHISFDGQRRIES
Sbjct: 54 RYSNMEKIKLFPAPTEPEAPLVSRRGGRIIHISFDGQRRIES 95
Score = 58.5 bits (140), Expect = 1e-07
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = -3
Query: 764 HPRGAIIGDTIVSGTEVPIKMGNALPLSA 678
HPRGAIIGDTI+ GTEVPIKMGNALPLSA
Sbjct: 25 HPRGAIIGDTIIYGTEVPIKMGNALPLSA 53
>OMO96696.1 50S ribosomal protein L2, chloroplastic-like protein [Corchorus
olitorius] OMP12908.1 50S ribosomal protein L2,
chloroplastic-like protein [Corchorus olitorius]
OMP12963.1 50S ribosomal protein L2, chloroplastic-like
protein [Corchorus olitorius]
Length = 38
Score = 74.7 bits (182), Expect = 2e-14
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = -1
Query: 487 MEKTKLFQAPTEPEAPLLSKRRGRVIHISFDGQRRIES 374
MEKTKLFQAPTEPEAPL+SKR GRVIHISFDGQRRIES
Sbjct: 1 MEKTKLFQAPTEPEAPLVSKRGGRVIHISFDGQRRIES 38
>XP_010110759.1 50S ribosomal protein L2 [Morus notabilis] EXC28024.1 50S ribosomal
protein L2 [Morus notabilis]
Length = 200
Score = 78.6 bits (192), Expect = 4e-14
Identities = 37/37 (100%), Positives = 37/37 (100%)
Frame = -3
Query: 113 SSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGT 3
SSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGT
Sbjct: 27 SSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGT 63
>KJB10645.1 hypothetical protein B456_001G213100 [Gossypium raimondii]
Length = 236
Score = 66.6 bits (161), Expect(2) = 1e-13
Identities = 33/38 (86%), Positives = 35/38 (92%), Gaps = 1/38 (2%)
Frame = -3
Query: 113 SSTSRKPYALEEACTVWEGVL-IDQKEESTSTDMPLGT 3
SSTSR YALEEACT+WEGVL IDQKEESTST+MPLGT
Sbjct: 53 SSTSRNSYALEEACTIWEGVLIIDQKEESTSTNMPLGT 90
Score = 38.1 bits (87), Expect(2) = 1e-13
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = -1
Query: 211 EDHNMSDSADLDSYISTHVV 152
EDHNMS S DLDSYIS HV+
Sbjct: 32 EDHNMSGSTDLDSYISNHVI 51
Score = 58.9 bits (141), Expect = 9e-07
Identities = 27/31 (87%), Positives = 30/31 (96%)
Frame = -1
Query: 487 MEKTKLFQAPTEPEAPLLSKRRGRVIHISFD 395
MEKTKLFQAPT+PEAPL+SKR GR+IHISFD
Sbjct: 1 MEKTKLFQAPTKPEAPLVSKRGGRLIHISFD 31
>OMO84071.1 50S ribosomal protein L2, chloroplastic-like protein [Corchorus
olitorius]
Length = 38
Score = 72.8 bits (177), Expect = 1e-13
Identities = 35/38 (92%), Positives = 36/38 (94%)
Frame = -1
Query: 487 MEKTKLFQAPTEPEAPLLSKRRGRVIHISFDGQRRIES 374
MEKTKLF APTEPEAPL+SKR GRVIHISFDGQRRIES
Sbjct: 1 MEKTKLFHAPTEPEAPLVSKRGGRVIHISFDGQRRIES 38
>YP_009176044.1 ribosomal protein L2 (chloroplast) [Ficus racemosa] YP_009176068.1
ribosomal protein L2 (chloroplast) [Ficus racemosa]
ALI30740.1 ribosomal protein L2 (chloroplast) [Ficus
racemosa] ALI30764.1 ribosomal protein L2 (chloroplast)
[Ficus racemosa]
Length = 315
Score = 78.6 bits (192), Expect = 2e-13
Identities = 37/37 (100%), Positives = 37/37 (100%)
Frame = -3
Query: 113 SSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGT 3
SSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGT
Sbjct: 142 SSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGT 178
Score = 62.0 bits (149), Expect = 1e-07
Identities = 29/30 (96%), Positives = 30/30 (100%)
Frame = -3
Query: 764 HPRGAIIGDTIVSGTEVPIKMGNALPLSAV 675
HPRGA+IGDTIVSGTEVPIKMGNALPLSAV
Sbjct: 110 HPRGALIGDTIVSGTEVPIKMGNALPLSAV 139
>KVH98858.1 hypothetical protein Ccrd_022915, partial [Cynara cardunculus var.
scolymus]
Length = 147
Score = 74.3 bits (181), Expect = 5e-13
Identities = 34/36 (94%), Positives = 36/36 (100%)
Frame = -3
Query: 110 STSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGT 3
STSRKPY+LEEACTVWEGVLID+KEESTSTDMPLGT
Sbjct: 17 STSRKPYSLEEACTVWEGVLIDKKEESTSTDMPLGT 52
>EEF47558.1 50S ribosomal protein L2, putative [Ricinus communis]
Length = 111
Score = 73.2 bits (178), Expect = 5e-13
Identities = 34/37 (91%), Positives = 35/37 (94%)
Frame = -3
Query: 113 SSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGT 3
SST RKPYALEEACTVWE +LIDQKEESTSTDMPLGT
Sbjct: 7 SSTPRKPYALEEACTVWEEILIDQKEESTSTDMPLGT 43
>XP_015572149.1 PREDICTED: 50S ribosomal protein L2, chloroplastic [Ricinus
communis]
Length = 116
Score = 73.2 bits (178), Expect = 6e-13
Identities = 34/37 (91%), Positives = 35/37 (94%)
Frame = -3
Query: 113 SSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGT 3
SST RKPYALEEACTVWE +LIDQKEESTSTDMPLGT
Sbjct: 12 SSTPRKPYALEEACTVWEEILIDQKEESTSTDMPLGT 48
>KVG78743.1 Ribosomal protein L2, partial [Cynara cardunculus var. scolymus]
Length = 80
Score = 71.2 bits (173), Expect = 1e-12
Identities = 33/36 (91%), Positives = 35/36 (97%)
Frame = -3
Query: 110 STSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGT 3
STS+K YALEEACTVWEGVLID+KEESTSTDMPLGT
Sbjct: 4 STSKKSYALEEACTVWEGVLIDKKEESTSTDMPLGT 39
>YP_009341838.1 ribosomal protein L2 (chloroplast) [Castanopsis concinna]
YP_009341816.1 ribosomal protein L2 (chloroplast)
[Castanopsis concinna] ALN96504.1 ribosomal protein L2
(chloroplast) [Castanopsis concinna] ALN96505.1
ribosomal protein L2 (chloroplast) [Castanopsis
concinna]
Length = 315
Score = 75.5 bits (184), Expect = 3e-12
Identities = 36/37 (97%), Positives = 36/37 (97%)
Frame = -3
Query: 113 SSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGT 3
SSTSRKPYALEEACTVWE VLIDQKEESTSTDMPLGT
Sbjct: 142 SSTSRKPYALEEACTVWEEVLIDQKEESTSTDMPLGT 178
Score = 62.8 bits (151), Expect = 7e-08
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = -3
Query: 764 HPRGAIIGDTIVSGTEVPIKMGNALPLSAV 675
HPRGAIIGDTIVSGTEVPIKMGNALPLSAV
Sbjct: 110 HPRGAIIGDTIVSGTEVPIKMGNALPLSAV 139
>KVI11497.1 Ribosomal protein L2, partial [Cynara cardunculus var. scolymus]
Length = 219
Score = 73.2 bits (178), Expect = 5e-12
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = -3
Query: 110 STSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGT 3
STSRKPYALEEAC VWEGVLID+KEESTSTDMPLGT
Sbjct: 4 STSRKPYALEEACIVWEGVLIDKKEESTSTDMPLGT 39
>CDX91813.1 BnaC03g31150D [Brassica napus]
Length = 187
Score = 72.0 bits (175), Expect = 8e-12
Identities = 33/35 (94%), Positives = 33/35 (94%)
Frame = -3
Query: 107 TSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGT 3
T KPYALEEACTVWEGVLIDQKEESTSTDMPLGT
Sbjct: 16 TEEKPYALEEACTVWEGVLIDQKEESTSTDMPLGT 50
>CDY28606.1 BnaA06g19320D [Brassica napus] CDX95206.1 BnaC09g16640D [Brassica
napus]
Length = 187
Score = 72.0 bits (175), Expect = 8e-12
Identities = 33/35 (94%), Positives = 33/35 (94%)
Frame = -3
Query: 107 TSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGT 3
T KPYALEEACTVWEGVLIDQKEESTSTDMPLGT
Sbjct: 16 TEEKPYALEEACTVWEGVLIDQKEESTSTDMPLGT 50
>YP_008592707.1 ribosomal protein L2 (chloroplast) [Berberis bealei] AGU37113.1
ribosomal protein L2 (chloroplast) [Berberis bealei]
Length = 310
Score = 73.6 bits (179), Expect = 1e-11
Identities = 35/37 (94%), Positives = 35/37 (94%)
Frame = -3
Query: 113 SSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGT 3
S TS KPYALEEACTVWEGVLIDQKEESTSTDMPLGT
Sbjct: 137 SYTSGKPYALEEACTVWEGVLIDQKEESTSTDMPLGT 173
Score = 57.8 bits (138), Expect = 4e-06
Identities = 27/28 (96%), Positives = 27/28 (96%)
Frame = -3
Query: 764 HPRGAIIGDTIVSGTEVPIKMGNALPLS 681
HPRGAIIGDTIVSGTEVPI MGNALPLS
Sbjct: 107 HPRGAIIGDTIVSGTEVPISMGNALPLS 134
>KVI09018.1 cytochrome c assembly protein, partial [Cynara cardunculus var.
scolymus]
Length = 236
Score = 72.4 bits (176), Expect = 1e-11
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = -3
Query: 110 STSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGT 3
STSRKPYALEEACTVWEGVLID+KEESTSTDM LGT
Sbjct: 4 STSRKPYALEEACTVWEGVLIDKKEESTSTDMSLGT 39
>XP_015575033.1 PREDICTED: 50S ribosomal protein L2, chloroplastic-like [Ricinus
communis]
Length = 125
Score = 69.7 bits (169), Expect = 2e-11
Identities = 34/37 (91%), Positives = 34/37 (91%)
Frame = -3
Query: 113 SSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGT 3
SST RKPYALEEA TVWE VLIDQKEESTSTDMPLGT
Sbjct: 27 SSTPRKPYALEEASTVWEEVLIDQKEESTSTDMPLGT 63
>CDY21179.1 BnaA01g34100D [Brassica napus]
Length = 266
Score = 72.0 bits (175), Expect = 3e-11
Identities = 33/35 (94%), Positives = 33/35 (94%)
Frame = -3
Query: 107 TSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGT 3
T KPYALEEACTVWEGVLIDQKEESTSTDMPLGT
Sbjct: 16 TEEKPYALEEACTVWEGVLIDQKEESTSTDMPLGT 50