BLASTX nr result
ID: Panax24_contig00031164
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax24_contig00031164
(1069 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_017241678.1 PREDICTED: DNA-directed RNA polymerases IV and V ... 547 0.0
XP_019167919.1 PREDICTED: DNA-directed RNA polymerases IV and V ... 516 e-170
XP_009787512.1 PREDICTED: DNA-directed RNA polymerases IV and V ... 515 e-170
XP_019252729.1 PREDICTED: DNA-directed RNA polymerases IV and V ... 515 e-170
XP_009787511.1 PREDICTED: DNA-directed RNA polymerases IV and V ... 515 e-170
XP_016433825.1 PREDICTED: DNA-directed RNA polymerases IV and V ... 515 e-170
XP_016481856.1 PREDICTED: DNA-directed RNA polymerases IV and V ... 512 e-169
XP_009605686.1 PREDICTED: DNA-directed RNA polymerases IV and V ... 512 e-169
XP_006351506.1 PREDICTED: DNA-directed RNA polymerases IV and V ... 512 e-169
XP_015069884.1 PREDICTED: DNA-directed RNA polymerases IV and V ... 510 e-168
XP_004236361.1 PREDICTED: DNA-directed RNA polymerases IV and V ... 509 e-168
KZM89779.1 hypothetical protein DCAR_022858 [Daucus carota subsp... 516 e-167
AAY68206.1 RNA polymerase IV second largest subunit, partial [So... 505 e-167
XP_016563842.1 PREDICTED: DNA-directed RNA polymerases IV and V ... 508 e-167
KDO52429.1 hypothetical protein CISIN_1g001050mg [Citrus sinensis] 505 e-167
XP_006442883.1 hypothetical protein CICLE_v10018562mg [Citrus cl... 504 e-166
XP_013442398.1 DNA-directed RNA polymerase [Medicago truncatula]... 482 e-166
AAY68198.1 RNA polymerase IV second largest subunit, partial [Rh... 498 e-166
XP_002283296.1 PREDICTED: DNA-directed RNA polymerases IV and V ... 501 e-165
CBI21137.3 unnamed protein product, partial [Vitis vinifera] 501 e-165
>XP_017241678.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
[Daucus carota subsp. sativus] KZN01194.1 hypothetical
protein DCAR_009948 [Daucus carota subsp. sativus]
Length = 1179
Score = 547 bits (1410), Expect = 0.0
Identities = 271/361 (75%), Positives = 303/361 (83%), Gaps = 5/361 (1%)
Frame = +2
Query: 2 KFKTGKEQFLDKDVSLVDTREIVIGTLPVMVKSDLCWMSKADKGDCDFDHGGYFIIKGAE 181
KFKTGKEQ++DK V EI IGTLPVMVKSDLCWM KA +GDCDFDHGGYFIIKGAE
Sbjct: 154 KFKTGKEQYVDKSVCKEIREEIPIGTLPVMVKSDLCWMKKAKQGDCDFDHGGYFIIKGAE 213
Query: 182 KTFVAQEQICLKRLWLASNPSWVVSYRNTFKRKRVYVKLLDSPKVEDIGGGEKVITVYFL 361
KTFVAQEQICLKRLWL SNPSW+ SYR+ KR RV+VKL+D PK EDIGGGEK++ VYFL
Sbjct: 214 KTFVAQEQICLKRLWLTSNPSWIASYRHANKRNRVHVKLID-PKSEDIGGGEKILAVYFL 272
Query: 362 VTEIPIWVLFFALGVSSDKEAVNLIDADVEDGNIVNILIASIHDADKKC-----ENFRRR 526
EIPIW+LFFALGV SDKE V+LID D+EDG IVNI+IASIH ADK+C E FRRR
Sbjct: 273 GMEIPIWILFFALGVLSDKEVVDLIDGDLEDGRIVNIMIASIHYADKECDEECAEKFRRR 332
Query: 527 GIALKYVEKLIKSCQFPPAESVEECFSSFLFSNLIGFKRKARLLAYMVKCLLEAYTGRRK 706
G+ALKYVEK +KSC FPPAES+E+C ++LFS+L GFK+KAR+LAYM KCLL+AYTGRRK
Sbjct: 333 GMALKYVEKKLKSCPFPPAESLEDCIKNYLFSSLTGFKQKARVLAYMTKCLLQAYTGRRK 392
Query: 707 VDNRDDFRNKXXXXXXXXXXXXXXVHIKHAERRMVKAMQRDLYGDRTIHPIEHYMDSSII 886
VDNRDDFRNK VH+KHAE+RMVKAMQRDLY D+ + IE Y+DSSI+
Sbjct: 393 VDNRDDFRNKRLELAGELLERELKVHLKHAEKRMVKAMQRDLYKDK-VEYIERYLDSSIV 451
Query: 887 TNGLSRAFSTGAWSHPYKRAERTSGVVANLGRTNPLQMIAEMRRTRQHVEYTGKVGDARY 1066
TNGLSRAFSTGAWSHPY R ERTSGVVANLGRTNPLQMIAEMRRTRQHV+YTG+VGDARY
Sbjct: 452 TNGLSRAFSTGAWSHPYIRGERTSGVVANLGRTNPLQMIAEMRRTRQHVDYTGRVGDARY 511
Query: 1067 P 1069
P
Sbjct: 512 P 512
>XP_019167919.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 2 [Ipomoea
nil]
Length = 1214
Score = 516 bits (1329), Expect = e-170
Identities = 245/358 (68%), Positives = 294/358 (82%), Gaps = 2/358 (0%)
Frame = +2
Query: 2 KFKTGKEQFLDKDVSLVDTREIVIGTLPVMVKSDLCWMSKADKG-DCDFDHGGYFIIKGA 178
KFKTG +QF+ K+ + DTR+++IG LPVMV SDLCWMS +K DC+FDHGGYFI+KGA
Sbjct: 181 KFKTGIDQFVSKECEMEDTRDLLIGRLPVMVNSDLCWMSDGNKKPDCEFDHGGYFIVKGA 240
Query: 179 EKTFVAQEQICLKRLWLASNPSWVVSYRNTFKRKRVYVKLLDSPKVEDI-GGGEKVITVY 355
EKTF+AQEQICLKRLW+ASNPSW+VSYR KRKRVY+KL ++PKVE + GGEKV+TVY
Sbjct: 241 EKTFIAQEQICLKRLWVASNPSWMVSYRPVSKRKRVYIKLTETPKVEPVVRGGEKVLTVY 300
Query: 356 FLVTEIPIWVLFFALGVSSDKEAVNLIDADVEDGNIVNILIASIHDADKKCENFRRRGIA 535
F VTE+PIW+ FFALGVSSD+E VNLID D +D IVNIL+ASIHDAD KCE+FR++ +A
Sbjct: 301 FSVTEMPIWIFFFALGVSSDREVVNLIDVDTKDTEIVNILVASIHDADSKCESFRKQPVA 360
Query: 536 LKYVEKLIKSCQFPPAESVEECFSSFLFSNLIGFKRKARLLAYMVKCLLEAYTGRRKVDN 715
L +V +L+++C+FPP ES+E+C ++FLF +L FK+KAR L YMVKCLL+AY+G+RK DN
Sbjct: 361 LNFVAQLMQNCRFPPQESIEDCINNFLFPSLNSFKQKARFLGYMVKCLLQAYSGKRKADN 420
Query: 716 RDDFRNKXXXXXXXXXXXXXXVHIKHAERRMVKAMQRDLYGDRTIHPIEHYMDSSIITNG 895
RDDFRNK VH+KH ER M KAMQRDLYGDR + IEHY+D+SI+TNG
Sbjct: 421 RDDFRNKRLELASELLERELRVHLKHVERVMTKAMQRDLYGDRQLQSIEHYVDASIVTNG 480
Query: 896 LSRAFSTGAWSHPYKRAERTSGVVANLGRTNPLQMIAEMRRTRQHVEYTGKVGDARYP 1069
L RAFSTGAWSHPYKR ER SGVVANL RTNPLQM A+MR+TRQ V YTGKVGDARYP
Sbjct: 481 LCRAFSTGAWSHPYKRMERVSGVVANLRRTNPLQMTADMRKTRQQVSYTGKVGDARYP 538
>XP_009787512.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 2 isoform X2
[Nicotiana sylvestris]
Length = 1216
Score = 515 bits (1327), Expect = e-170
Identities = 243/356 (68%), Positives = 287/356 (80%)
Frame = +2
Query: 2 KFKTGKEQFLDKDVSLVDTREIVIGTLPVMVKSDLCWMSKADKGDCDFDHGGYFIIKGAE 181
KFKTG +QF+DK+ + D R+++IG +PVMV S+LCWM+ DK DC+FDHGGYFI+KGAE
Sbjct: 191 KFKTGVDQFVDKECEMEDKRDVLIGRIPVMVNSELCWMNGVDKPDCEFDHGGYFIVKGAE 250
Query: 182 KTFVAQEQICLKRLWLASNPSWVVSYRNTFKRKRVYVKLLDSPKVEDIGGGEKVITVYFL 361
KTF+AQEQICLKRLW++++P+W V+YR KR RVY+KL ++ K+E I G EK +TVYF
Sbjct: 251 KTFIAQEQICLKRLWVSNSPTWTVAYRPVAKRNRVYIKLAETLKLEHIKGAEKALTVYFS 310
Query: 362 VTEIPIWVLFFALGVSSDKEAVNLIDADVEDGNIVNILIASIHDADKKCENFRRRGIALK 541
V E+PIW+LFFALGVSSD+E VNLID D+ED NIVNIL+ASIHDADKKCE+FR+ AL
Sbjct: 311 VAEMPIWILFFALGVSSDREVVNLIDVDIEDTNIVNILVASIHDADKKCEDFRKGKKALA 370
Query: 542 YVEKLIKSCQFPPAESVEECFSSFLFSNLIGFKRKARLLAYMVKCLLEAYTGRRKVDNRD 721
YV++LIK C+FPP ESVEEC +LF NL G K+KAR L YMVK LL A+ GRRKVDNRD
Sbjct: 371 YVDRLIKGCRFPPQESVEECIQQYLFPNLSGLKQKARFLGYMVKSLLHAFIGRRKVDNRD 430
Query: 722 DFRNKXXXXXXXXXXXXXXVHIKHAERRMVKAMQRDLYGDRTIHPIEHYMDSSIITNGLS 901
DFRNK HIKHAERRM+KAMQRDLYGDR + PIEHY+D+SIITNGLS
Sbjct: 431 DFRNKRLELAGELLERELRAHIKHAERRMLKAMQRDLYGDRQVQPIEHYLDASIITNGLS 490
Query: 902 RAFSTGAWSHPYKRAERTSGVVANLGRTNPLQMIAEMRRTRQHVEYTGKVGDARYP 1069
RAFSTG W HPYKR ER SGVVA + RTNPLQM A+MR+TRQ V YTGKVGDARYP
Sbjct: 491 RAFSTGHWCHPYKRMERVSGVVATIRRTNPLQMTADMRKTRQQVTYTGKVGDARYP 546
>XP_019252729.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
[Nicotiana attenuata] XP_019252735.1 PREDICTED:
DNA-directed RNA polymerases IV and V subunit 2-like
[Nicotiana attenuata] XP_019252739.1 PREDICTED:
DNA-directed RNA polymerases IV and V subunit 2-like
[Nicotiana attenuata] OIT08688.1 dna-directed rna
polymerases iv and v subunit 2 [Nicotiana attenuata]
Length = 1218
Score = 515 bits (1327), Expect = e-170
Identities = 243/356 (68%), Positives = 288/356 (80%)
Frame = +2
Query: 2 KFKTGKEQFLDKDVSLVDTREIVIGTLPVMVKSDLCWMSKADKGDCDFDHGGYFIIKGAE 181
KFKTG +QF+DK+ + D R+++IG +PVMV S+LCWM++ DK DC+FDHGGYFI+KGAE
Sbjct: 193 KFKTGVDQFVDKECEMEDKRDVLIGRIPVMVNSELCWMNRVDKPDCEFDHGGYFIVKGAE 252
Query: 182 KTFVAQEQICLKRLWLASNPSWVVSYRNTFKRKRVYVKLLDSPKVEDIGGGEKVITVYFL 361
KTF+AQEQICLKRLW++++P+W V+YR KR RVY+KL ++ K+E I G EK +TVYF
Sbjct: 253 KTFIAQEQICLKRLWVSNSPTWTVAYRPVAKRNRVYIKLAETLKLEHIKGVEKALTVYFS 312
Query: 362 VTEIPIWVLFFALGVSSDKEAVNLIDADVEDGNIVNILIASIHDADKKCENFRRRGIALK 541
V E+PIW+LFFALGVSSD+E VNLID D+ED NIVNIL+ASIHDADKKCE+FR+ AL
Sbjct: 313 VAEMPIWILFFALGVSSDREVVNLIDVDIEDTNIVNILVASIHDADKKCEDFRKGKKALA 372
Query: 542 YVEKLIKSCQFPPAESVEECFSSFLFSNLIGFKRKARLLAYMVKCLLEAYTGRRKVDNRD 721
YV++LIK C+FPP ESVEEC +LF NL G K+KAR L YMVK LL A+ GRRKVDNRD
Sbjct: 373 YVDRLIKGCRFPPQESVEECIQHYLFPNLSGLKQKARFLGYMVKSLLHAFIGRRKVDNRD 432
Query: 722 DFRNKXXXXXXXXXXXXXXVHIKHAERRMVKAMQRDLYGDRTIHPIEHYMDSSIITNGLS 901
DFRNK HIKHAERRM+KAMQRDLYGDR + PIEHY+D+SIITNGLS
Sbjct: 433 DFRNKRLELAGELLERELRAHIKHAERRMLKAMQRDLYGDRQVQPIEHYLDASIITNGLS 492
Query: 902 RAFSTGAWSHPYKRAERTSGVVANLGRTNPLQMIAEMRRTRQHVEYTGKVGDARYP 1069
RAFSTG W HPYKR ER SGVVA + RTNPLQM A+MR+TRQ V YTGKVGDARYP
Sbjct: 493 RAFSTGHWCHPYKRMERVSGVVATIRRTNPLQMTADMRKTRQQVTYTGKVGDARYP 548
>XP_009787511.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 2 isoform X1
[Nicotiana sylvestris]
Length = 1226
Score = 515 bits (1327), Expect = e-170
Identities = 243/356 (68%), Positives = 287/356 (80%)
Frame = +2
Query: 2 KFKTGKEQFLDKDVSLVDTREIVIGTLPVMVKSDLCWMSKADKGDCDFDHGGYFIIKGAE 181
KFKTG +QF+DK+ + D R+++IG +PVMV S+LCWM+ DK DC+FDHGGYFI+KGAE
Sbjct: 201 KFKTGVDQFVDKECEMEDKRDVLIGRIPVMVNSELCWMNGVDKPDCEFDHGGYFIVKGAE 260
Query: 182 KTFVAQEQICLKRLWLASNPSWVVSYRNTFKRKRVYVKLLDSPKVEDIGGGEKVITVYFL 361
KTF+AQEQICLKRLW++++P+W V+YR KR RVY+KL ++ K+E I G EK +TVYF
Sbjct: 261 KTFIAQEQICLKRLWVSNSPTWTVAYRPVAKRNRVYIKLAETLKLEHIKGAEKALTVYFS 320
Query: 362 VTEIPIWVLFFALGVSSDKEAVNLIDADVEDGNIVNILIASIHDADKKCENFRRRGIALK 541
V E+PIW+LFFALGVSSD+E VNLID D+ED NIVNIL+ASIHDADKKCE+FR+ AL
Sbjct: 321 VAEMPIWILFFALGVSSDREVVNLIDVDIEDTNIVNILVASIHDADKKCEDFRKGKKALA 380
Query: 542 YVEKLIKSCQFPPAESVEECFSSFLFSNLIGFKRKARLLAYMVKCLLEAYTGRRKVDNRD 721
YV++LIK C+FPP ESVEEC +LF NL G K+KAR L YMVK LL A+ GRRKVDNRD
Sbjct: 381 YVDRLIKGCRFPPQESVEECIQQYLFPNLSGLKQKARFLGYMVKSLLHAFIGRRKVDNRD 440
Query: 722 DFRNKXXXXXXXXXXXXXXVHIKHAERRMVKAMQRDLYGDRTIHPIEHYMDSSIITNGLS 901
DFRNK HIKHAERRM+KAMQRDLYGDR + PIEHY+D+SIITNGLS
Sbjct: 441 DFRNKRLELAGELLERELRAHIKHAERRMLKAMQRDLYGDRQVQPIEHYLDASIITNGLS 500
Query: 902 RAFSTGAWSHPYKRAERTSGVVANLGRTNPLQMIAEMRRTRQHVEYTGKVGDARYP 1069
RAFSTG W HPYKR ER SGVVA + RTNPLQM A+MR+TRQ V YTGKVGDARYP
Sbjct: 501 RAFSTGHWCHPYKRMERVSGVVATIRRTNPLQMTADMRKTRQQVTYTGKVGDARYP 556
>XP_016433825.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
[Nicotiana tabacum]
Length = 1243
Score = 515 bits (1327), Expect = e-170
Identities = 243/356 (68%), Positives = 287/356 (80%)
Frame = +2
Query: 2 KFKTGKEQFLDKDVSLVDTREIVIGTLPVMVKSDLCWMSKADKGDCDFDHGGYFIIKGAE 181
KFKTG +QF+DK+ + D R+++IG +PVMV S+LCWM+ DK DC+FDHGGYFI+KGAE
Sbjct: 191 KFKTGVDQFVDKECEMEDKRDVLIGRIPVMVNSELCWMNGVDKPDCEFDHGGYFIVKGAE 250
Query: 182 KTFVAQEQICLKRLWLASNPSWVVSYRNTFKRKRVYVKLLDSPKVEDIGGGEKVITVYFL 361
KTF+AQEQICLKRLW++++P+W V+YR KR RVY+KL ++ K+E I G EK +TVYF
Sbjct: 251 KTFIAQEQICLKRLWVSNSPTWTVAYRPVAKRNRVYIKLAETLKLEHIKGAEKALTVYFS 310
Query: 362 VTEIPIWVLFFALGVSSDKEAVNLIDADVEDGNIVNILIASIHDADKKCENFRRRGIALK 541
V E+PIW+LFFALGVSSD+E VNLID D+ED NIVNIL+ASIHDADKKCE+FR+ AL
Sbjct: 311 VAEMPIWILFFALGVSSDREVVNLIDVDIEDTNIVNILVASIHDADKKCEDFRKGKKALA 370
Query: 542 YVEKLIKSCQFPPAESVEECFSSFLFSNLIGFKRKARLLAYMVKCLLEAYTGRRKVDNRD 721
YV++LIK C+FPP ESVEEC +LF NL G K+KAR L YMVK LL A+ GRRKVDNRD
Sbjct: 371 YVDRLIKGCRFPPQESVEECIQQYLFPNLSGLKQKARFLGYMVKSLLHAFIGRRKVDNRD 430
Query: 722 DFRNKXXXXXXXXXXXXXXVHIKHAERRMVKAMQRDLYGDRTIHPIEHYMDSSIITNGLS 901
DFRNK HIKHAERRM+KAMQRDLYGDR + PIEHY+D+SIITNGLS
Sbjct: 431 DFRNKRLELAGELLERELRAHIKHAERRMLKAMQRDLYGDRQVQPIEHYLDASIITNGLS 490
Query: 902 RAFSTGAWSHPYKRAERTSGVVANLGRTNPLQMIAEMRRTRQHVEYTGKVGDARYP 1069
RAFSTG W HPYKR ER SGVVA + RTNPLQM A+MR+TRQ V YTGKVGDARYP
Sbjct: 491 RAFSTGHWCHPYKRMERVSGVVATIRRTNPLQMTADMRKTRQQVTYTGKVGDARYP 546
>XP_016481856.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
[Nicotiana tabacum]
Length = 1220
Score = 512 bits (1319), Expect = e-169
Identities = 242/356 (67%), Positives = 287/356 (80%)
Frame = +2
Query: 2 KFKTGKEQFLDKDVSLVDTREIVIGTLPVMVKSDLCWMSKADKGDCDFDHGGYFIIKGAE 181
KFKTG +QF+DK+ + D R+++IG +PVMV S+LCWM+ DK DC+FDHGGYFI+KGAE
Sbjct: 195 KFKTGVDQFVDKECEMEDKRDVLIGRIPVMVNSELCWMNGVDKPDCEFDHGGYFIVKGAE 254
Query: 182 KTFVAQEQICLKRLWLASNPSWVVSYRNTFKRKRVYVKLLDSPKVEDIGGGEKVITVYFL 361
KTF+AQEQICLKRLW++++P+W V+YR KR RVY+KL ++ K+E I G EK +TVYF
Sbjct: 255 KTFIAQEQICLKRLWVSNSPTWTVAYRPVAKRNRVYIKLAETLKLEHIKGVEKALTVYFS 314
Query: 362 VTEIPIWVLFFALGVSSDKEAVNLIDADVEDGNIVNILIASIHDADKKCENFRRRGIALK 541
V E+PIW+LFFALGVSSD+E V+LID D+ED NIVNIL+ASIHDADKKCE+FR+ AL
Sbjct: 315 VAEMPIWILFFALGVSSDREVVDLIDVDIEDTNIVNILVASIHDADKKCEDFRKGKKALA 374
Query: 542 YVEKLIKSCQFPPAESVEECFSSFLFSNLIGFKRKARLLAYMVKCLLEAYTGRRKVDNRD 721
YV++LIK C+FPP ESVEEC +LF NL G K+KAR L YMVK LL A+ GRRKVDNRD
Sbjct: 375 YVDRLIKGCRFPPQESVEECIKQYLFPNLSGLKQKARFLGYMVKSLLHAFIGRRKVDNRD 434
Query: 722 DFRNKXXXXXXXXXXXXXXVHIKHAERRMVKAMQRDLYGDRTIHPIEHYMDSSIITNGLS 901
DFRNK HIKHAERRM+KAMQRDLYGDR + PIEHY+D+SIITNGLS
Sbjct: 435 DFRNKRLELAGELLERELRAHIKHAERRMLKAMQRDLYGDRQVQPIEHYLDASIITNGLS 494
Query: 902 RAFSTGAWSHPYKRAERTSGVVANLGRTNPLQMIAEMRRTRQHVEYTGKVGDARYP 1069
RAFSTG W HPYKR ER SGVVA + RTNPLQM A+MR+TRQ V YTGKVGDARYP
Sbjct: 495 RAFSTGHWCHPYKRMERVSGVVATIRRTNPLQMTADMRKTRQQVTYTGKVGDARYP 550
>XP_009605686.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 2 [Nicotiana
tomentosiformis]
Length = 1220
Score = 512 bits (1319), Expect = e-169
Identities = 242/356 (67%), Positives = 287/356 (80%)
Frame = +2
Query: 2 KFKTGKEQFLDKDVSLVDTREIVIGTLPVMVKSDLCWMSKADKGDCDFDHGGYFIIKGAE 181
KFKTG +QF+DK+ + D R+++IG +PVMV S+LCWM+ DK DC+FDHGGYFI+KGAE
Sbjct: 195 KFKTGVDQFVDKECEMEDKRDVLIGRIPVMVNSELCWMNGVDKPDCEFDHGGYFIVKGAE 254
Query: 182 KTFVAQEQICLKRLWLASNPSWVVSYRNTFKRKRVYVKLLDSPKVEDIGGGEKVITVYFL 361
KTF+AQEQICLKRLW++++P+W V+YR KR RVY+KL ++ K+E I G EK +TVYF
Sbjct: 255 KTFIAQEQICLKRLWVSNSPTWTVAYRPVAKRNRVYIKLAETLKLEHIKGVEKALTVYFS 314
Query: 362 VTEIPIWVLFFALGVSSDKEAVNLIDADVEDGNIVNILIASIHDADKKCENFRRRGIALK 541
V E+PIW+LFFALGVSSD+E V+LID D+ED NIVNIL+ASIHDADKKCE+FR+ AL
Sbjct: 315 VAEMPIWILFFALGVSSDREVVDLIDVDIEDTNIVNILVASIHDADKKCEDFRKGKKALA 374
Query: 542 YVEKLIKSCQFPPAESVEECFSSFLFSNLIGFKRKARLLAYMVKCLLEAYTGRRKVDNRD 721
YV++LIK C+FPP ESVEEC +LF NL G K+KAR L YMVK LL A+ GRRKVDNRD
Sbjct: 375 YVDRLIKGCRFPPQESVEECIKQYLFPNLSGLKQKARFLGYMVKSLLHAFIGRRKVDNRD 434
Query: 722 DFRNKXXXXXXXXXXXXXXVHIKHAERRMVKAMQRDLYGDRTIHPIEHYMDSSIITNGLS 901
DFRNK HIKHAERRM+KAMQRDLYGDR + PIEHY+D+SIITNGLS
Sbjct: 435 DFRNKRLELAGELLERELRAHIKHAERRMLKAMQRDLYGDRQVQPIEHYLDASIITNGLS 494
Query: 902 RAFSTGAWSHPYKRAERTSGVVANLGRTNPLQMIAEMRRTRQHVEYTGKVGDARYP 1069
RAFSTG W HPYKR ER SGVVA + RTNPLQM A+MR+TRQ V YTGKVGDARYP
Sbjct: 495 RAFSTGHWCHPYKRMERVSGVVATIRRTNPLQMTADMRKTRQQVTYTGKVGDARYP 550
>XP_006351506.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
[Solanum tuberosum]
Length = 1217
Score = 512 bits (1318), Expect = e-169
Identities = 243/356 (68%), Positives = 291/356 (81%)
Frame = +2
Query: 2 KFKTGKEQFLDKDVSLVDTREIVIGTLPVMVKSDLCWMSKADKGDCDFDHGGYFIIKGAE 181
KFKTG +QF+DK+ + D R+++IG +PVMV S+LCWM+ DK DC+FDHGGYFI+KGAE
Sbjct: 193 KFKTGVDQFVDKECEVEDKRDVLIGRIPVMVNSELCWMNGVDKLDCEFDHGGYFIVKGAE 252
Query: 182 KTFVAQEQICLKRLWLASNPSWVVSYRNTFKRKRVYVKLLDSPKVEDIGGGEKVITVYFL 361
KTF+AQEQ+CLKRLW+++NP+W+V YR KRKRVY+KL ++ K+E I GGEK ++VY L
Sbjct: 253 KTFIAQEQLCLKRLWVSNNPTWMVGYRPGEKRKRVYIKLTETLKLEHIKGGEKALSVYIL 312
Query: 362 VTEIPIWVLFFALGVSSDKEAVNLIDADVEDGNIVNILIASIHDADKKCENFRRRGIALK 541
E+PIWVLFFALGVSSD+E VNLID D+ED IVNIL+ASIH+ADK CE+FR+ AL
Sbjct: 313 A-EMPIWVLFFALGVSSDREVVNLIDVDIEDTTIVNILVASIHEADKNCEDFRKGKKALA 371
Query: 542 YVEKLIKSCQFPPAESVEECFSSFLFSNLIGFKRKARLLAYMVKCLLEAYTGRRKVDNRD 721
YV++LIK+C+FPP ESVEEC +++LF NL GFK+KAR L YMVKCLL ++ GRRKVDNRD
Sbjct: 372 YVDRLIKNCKFPPQESVEECINAYLFPNLSGFKQKARFLGYMVKCLLHSFIGRRKVDNRD 431
Query: 722 DFRNKXXXXXXXXXXXXXXVHIKHAERRMVKAMQRDLYGDRTIHPIEHYMDSSIITNGLS 901
DFRNK HIKHAERRMVKAMQRDLYGDR + PIEHY+D+SIITNGLS
Sbjct: 432 DFRNKRLELAGELLERELRAHIKHAERRMVKAMQRDLYGDRQVQPIEHYLDASIITNGLS 491
Query: 902 RAFSTGAWSHPYKRAERTSGVVANLGRTNPLQMIAEMRRTRQHVEYTGKVGDARYP 1069
RAFSTG W HPYKR ER SGVVA L RTNPLQM A+MR++RQ V YTGKVGDARYP
Sbjct: 492 RAFSTGHWCHPYKRMERVSGVVATLRRTNPLQMTADMRKSRQQVTYTGKVGDARYP 547
>XP_015069884.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
[Solanum pennellii]
Length = 1217
Score = 510 bits (1314), Expect = e-168
Identities = 242/356 (67%), Positives = 291/356 (81%)
Frame = +2
Query: 2 KFKTGKEQFLDKDVSLVDTREIVIGTLPVMVKSDLCWMSKADKGDCDFDHGGYFIIKGAE 181
KFKTG ++F+DK+ + D R+++IG +PVMV S+LCWM+ DK DC+FDHGGYFI+KGAE
Sbjct: 193 KFKTGVDRFVDKECEVEDKRDVLIGRIPVMVNSELCWMNGVDKLDCEFDHGGYFIVKGAE 252
Query: 182 KTFVAQEQICLKRLWLASNPSWVVSYRNTFKRKRVYVKLLDSPKVEDIGGGEKVITVYFL 361
KTF+AQEQ+CLKRLW+++NP+W+V YR KRKRVY+KL ++ K+E I GGEK ++VY L
Sbjct: 253 KTFIAQEQLCLKRLWVSNNPTWMVGYRPGEKRKRVYIKLTETLKLEHIKGGEKALSVYIL 312
Query: 362 VTEIPIWVLFFALGVSSDKEAVNLIDADVEDGNIVNILIASIHDADKKCENFRRRGIALK 541
E+PIWVLFFALGVSSD+E VNLID D+ED IVNIL+ASIH+ADK CE+FR+ AL
Sbjct: 313 A-EMPIWVLFFALGVSSDREVVNLIDVDIEDTTIVNILVASIHEADKNCEDFRKGKKALA 371
Query: 542 YVEKLIKSCQFPPAESVEECFSSFLFSNLIGFKRKARLLAYMVKCLLEAYTGRRKVDNRD 721
YV++LIK+C+FPP ESVEEC +++LF NL GFK+KAR L YMVKCLL ++ GRRKVDNRD
Sbjct: 372 YVDRLIKNCKFPPQESVEECINAYLFPNLSGFKQKARFLGYMVKCLLHSFIGRRKVDNRD 431
Query: 722 DFRNKXXXXXXXXXXXXXXVHIKHAERRMVKAMQRDLYGDRTIHPIEHYMDSSIITNGLS 901
DFRNK HIKHAERRMVKAMQRDLYGDR + PIEHY+D+SIITNGLS
Sbjct: 432 DFRNKRLELAGELLERELRAHIKHAERRMVKAMQRDLYGDRQVQPIEHYLDASIITNGLS 491
Query: 902 RAFSTGAWSHPYKRAERTSGVVANLGRTNPLQMIAEMRRTRQHVEYTGKVGDARYP 1069
RAFSTG W HPYKR ER SGVVA L RTNPLQM A+MR++RQ V YTGKVGDARYP
Sbjct: 492 RAFSTGHWCHPYKRMERVSGVVATLRRTNPLQMTADMRKSRQQVTYTGKVGDARYP 547
>XP_004236361.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 2 [Solanum
lycopersicum]
Length = 1217
Score = 509 bits (1312), Expect = e-168
Identities = 242/356 (67%), Positives = 291/356 (81%)
Frame = +2
Query: 2 KFKTGKEQFLDKDVSLVDTREIVIGTLPVMVKSDLCWMSKADKGDCDFDHGGYFIIKGAE 181
KFKTG ++F+DK+ + D R+++IG +PVMV S+LCWM+ DK DC+FDHGGYFI+KGAE
Sbjct: 193 KFKTGVDRFVDKEWEVEDKRDVLIGRIPVMVNSELCWMNGVDKLDCEFDHGGYFIVKGAE 252
Query: 182 KTFVAQEQICLKRLWLASNPSWVVSYRNTFKRKRVYVKLLDSPKVEDIGGGEKVITVYFL 361
KTF+AQEQ+CLKRLW+++NP+W+V YR KRKRVY+KL ++ K+E I GGEK ++VY L
Sbjct: 253 KTFIAQEQLCLKRLWVSNNPTWMVGYRPGEKRKRVYIKLTETLKLEHIKGGEKALSVYIL 312
Query: 362 VTEIPIWVLFFALGVSSDKEAVNLIDADVEDGNIVNILIASIHDADKKCENFRRRGIALK 541
E+PIWVLFFALGVSSD+E VNLID D+ED IVNIL+ASIH+ADK CE+FR+ AL
Sbjct: 313 A-EMPIWVLFFALGVSSDREVVNLIDVDIEDTTIVNILVASIHEADKNCEDFRKGKKALA 371
Query: 542 YVEKLIKSCQFPPAESVEECFSSFLFSNLIGFKRKARLLAYMVKCLLEAYTGRRKVDNRD 721
YV++LIK+C+FPP ESVEEC +++LF NL GFK+KAR L YMVKCLL ++ GRRKVDNRD
Sbjct: 372 YVDRLIKNCKFPPQESVEECINAYLFPNLSGFKQKARFLGYMVKCLLHSFIGRRKVDNRD 431
Query: 722 DFRNKXXXXXXXXXXXXXXVHIKHAERRMVKAMQRDLYGDRTIHPIEHYMDSSIITNGLS 901
DFRNK HIKHAERRMVKAMQRDLYGDR + PIEHY+D+SIITNGLS
Sbjct: 432 DFRNKRLELAGELLERELRAHIKHAERRMVKAMQRDLYGDRQVQPIEHYLDASIITNGLS 491
Query: 902 RAFSTGAWSHPYKRAERTSGVVANLGRTNPLQMIAEMRRTRQHVEYTGKVGDARYP 1069
RAFSTG W HPYKR ER SGVVA L RTNPLQM A+MR++RQ V YTGKVGDARYP
Sbjct: 492 RAFSTGHWCHPYKRMERVSGVVATLRRTNPLQMTADMRKSRQQVTYTGKVGDARYP 547
>KZM89779.1 hypothetical protein DCAR_022858 [Daucus carota subsp. sativus]
Length = 1552
Score = 516 bits (1328), Expect = e-167
Identities = 262/361 (72%), Positives = 291/361 (80%), Gaps = 5/361 (1%)
Frame = +2
Query: 2 KFKTGKEQFLDKDVSLVDTREIVIGTLPVMVKSDLCWMSKADKGDCDFDHGGYFIIKGAE 181
KFKTGKEQ++DK V EI IGTLPVMVKSDLCWM KA +GDCDFD GGYFIIKGAE
Sbjct: 609 KFKTGKEQYVDKTVCKEIREEIPIGTLPVMVKSDLCWMKKAKQGDCDFDQGGYFIIKGAE 668
Query: 182 KTFVAQEQICLKRLWLASNPSWVVSYRNTFKRKRVYVKLLDSPKVEDIGGGEKVITVYFL 361
KTFVAQEQICLKRLW+ S+P W SY + KRKRV V LLD PK +DIGG E +TV FL
Sbjct: 669 KTFVAQEQICLKRLWVTSSP-WKASYLHATKRKRVKVHLLD-PKSDDIGGVENFLTVSFL 726
Query: 362 VTEIPIWVLFFALGVSSDKEAVNLIDADVEDGNIVNILIASIHDADKKC-----ENFRRR 526
EIPIWVLFFALGVSSDKE V+LID D+EDG I+NI+IASIH ADK C E F RR
Sbjct: 727 GIEIPIWVLFFALGVSSDKEVVDLIDVDLEDGRIINIMIASIHHADKDCDEECGEKFCRR 786
Query: 527 GIALKYVEKLIKSCQFPPAESVEECFSSFLFSNLIGFKRKARLLAYMVKCLLEAYTGRRK 706
IALKY+EK +K+C FPP ESVE+C +LFS+L GFK+KAR+LAYM KCLL+AYTGRRK
Sbjct: 787 AIALKYLEKKLKNCTFPPEESVEDCIKKYLFSSLTGFKQKARVLAYMTKCLLQAYTGRRK 846
Query: 707 VDNRDDFRNKXXXXXXXXXXXXXXVHIKHAERRMVKAMQRDLYGDRTIHPIEHYMDSSII 886
VDNRDDFRNK VH+KHAERRMV+ MQRDLY D+ + IE Y+DSSII
Sbjct: 847 VDNRDDFRNKRLELAGELLERELKVHLKHAERRMVQTMQRDLYNDK-VEFIERYLDSSII 905
Query: 887 TNGLSRAFSTGAWSHPYKRAERTSGVVANLGRTNPLQMIAEMRRTRQHVEYTGKVGDARY 1066
TNGLSRAFSTGAWSHPYKR ERTSGVVANLGRTNPLQMIAEMRRTRQHV+YTG++GDARY
Sbjct: 906 TNGLSRAFSTGAWSHPYKRGERTSGVVANLGRTNPLQMIAEMRRTRQHVDYTGRIGDARY 965
Query: 1067 P 1069
P
Sbjct: 966 P 966
Score = 270 bits (691), Expect = 5e-78
Identities = 140/200 (70%), Positives = 156/200 (78%), Gaps = 5/200 (2%)
Frame = +2
Query: 2 KFKTGKEQFLDKDVSLVDTREIVIGTLPVMVKSDLCWMSKADKGDCDFDHGGYFIIKGAE 181
KFKTGKEQ++DK V EI IGTLPVMVKSDLCWM KA +GDCDFD GGYFIIKGAE
Sbjct: 199 KFKTGKEQYVDKTVCKEIREEIPIGTLPVMVKSDLCWMKKAKQGDCDFDQGGYFIIKGAE 258
Query: 182 KTFVAQEQICLKRLWLASNPSWVVSYRNTFKRKRVYVKLLDSPKVEDIGGGEKVITVYFL 361
KTFVAQEQICLKRLW+ S+P W SY + KRKRV V LLD PK +DIGG E +TV FL
Sbjct: 259 KTFVAQEQICLKRLWVTSSP-WKASYLHATKRKRVKVHLLD-PKSDDIGGVENFLTVSFL 316
Query: 362 VTEIPIWVLFFALGVSSDKEAVNLIDADVEDGNIVNILIASIHDADKKC-----ENFRRR 526
EIPIWVLFFALGVSSDKE V+LID D+EDG I+NI+IASIH ADK C E F RR
Sbjct: 317 GIEIPIWVLFFALGVSSDKEVVDLIDVDLEDGRIINIMIASIHHADKDCDEECGEKFCRR 376
Query: 527 GIALKYVEKLIKSCQFPPAE 586
IALKY+EK +K+C FPP +
Sbjct: 377 AIALKYLEKKLKNCTFPPED 396
>AAY68206.1 RNA polymerase IV second largest subunit, partial [Solanum
lycopersicum]
Length = 1123
Score = 505 bits (1301), Expect = e-167
Identities = 241/356 (67%), Positives = 289/356 (81%)
Frame = +2
Query: 2 KFKTGKEQFLDKDVSLVDTREIVIGTLPVMVKSDLCWMSKADKGDCDFDHGGYFIIKGAE 181
KFKTG ++F+DK+ + R+++IG +PVMV S+LCWM+ DK DC+FDHGGYFI KGAE
Sbjct: 187 KFKTGVDRFVDKEWEVEGKRDVLIGRIPVMVNSELCWMNGVDKLDCEFDHGGYFIAKGAE 246
Query: 182 KTFVAQEQICLKRLWLASNPSWVVSYRNTFKRKRVYVKLLDSPKVEDIGGGEKVITVYFL 361
KTF+AQEQ+CLKRLW+++NP+W+V YR KRKRVY+KL ++ K+E I GGEK ++VY L
Sbjct: 247 KTFIAQEQLCLKRLWVSNNPTWMVGYRPGEKRKRVYIKLTETLKLEHIKGGEKALSVYIL 306
Query: 362 VTEIPIWVLFFALGVSSDKEAVNLIDADVEDGNIVNILIASIHDADKKCENFRRRGIALK 541
E+PIWVLFFALGVSSD+E VNLID D+ED IVNIL+ASIH+ADK CE+FR+ AL
Sbjct: 307 A-EMPIWVLFFALGVSSDREVVNLIDVDIEDTTIVNILVASIHEADKNCEDFRKGKKALA 365
Query: 542 YVEKLIKSCQFPPAESVEECFSSFLFSNLIGFKRKARLLAYMVKCLLEAYTGRRKVDNRD 721
YV++LIK+C+FPP ESVEEC +++LF NL GFK+KAR L YMVKCLL ++ GRRKVDNRD
Sbjct: 366 YVDRLIKNCKFPPQESVEECINAYLFPNLSGFKQKARFLGYMVKCLLHSFIGRRKVDNRD 425
Query: 722 DFRNKXXXXXXXXXXXXXXVHIKHAERRMVKAMQRDLYGDRTIHPIEHYMDSSIITNGLS 901
DFRNK HIKHAERRMVKAMQRDLYGDR + PIEHY+D+SIITNGLS
Sbjct: 426 DFRNKRLELAGELLERELRAHIKHAERRMVKAMQRDLYGDRQVQPIEHYLDASIITNGLS 485
Query: 902 RAFSTGAWSHPYKRAERTSGVVANLGRTNPLQMIAEMRRTRQHVEYTGKVGDARYP 1069
RAFSTG W HPYKR ER SGVVA L RTNPLQM A+MR++RQ V YTGKVGDARYP
Sbjct: 486 RAFSTGHWCHPYKRMERVSGVVATLRRTNPLQMTADMRKSRQQVTYTGKVGDARYP 541
>XP_016563842.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
[Capsicum annuum] XP_016563843.1 PREDICTED: DNA-directed
RNA polymerases IV and V subunit 2-like [Capsicum annuum]
Length = 1217
Score = 508 bits (1307), Expect = e-167
Identities = 240/356 (67%), Positives = 290/356 (81%)
Frame = +2
Query: 2 KFKTGKEQFLDKDVSLVDTREIVIGTLPVMVKSDLCWMSKADKGDCDFDHGGYFIIKGAE 181
KFKTG ++F+DK+ + D R+++IG +PVMV S+LCWM+ +K DC+FDHGGYFI+KGAE
Sbjct: 193 KFKTGVDRFVDKECEVEDKRDVLIGRIPVMVNSELCWMNGVEKPDCEFDHGGYFIVKGAE 252
Query: 182 KTFVAQEQICLKRLWLASNPSWVVSYRNTFKRKRVYVKLLDSPKVEDIGGGEKVITVYFL 361
KTF+AQEQ+CLKRLW+++NP+W+V YR KRKRVYVKL ++ K+E I GGEK ++VY L
Sbjct: 253 KTFIAQEQLCLKRLWVSNNPTWMVGYRPGEKRKRVYVKLTETLKLEHIKGGEKALSVYIL 312
Query: 362 VTEIPIWVLFFALGVSSDKEAVNLIDADVEDGNIVNILIASIHDADKKCENFRRRGIALK 541
E+PIW+LFFALGVSSDKE VNLID D+ED IVNIL+ASIH+ADK CE+FR+ AL
Sbjct: 313 A-EMPIWILFFALGVSSDKEVVNLIDVDIEDTRIVNILVASIHEADKNCEDFRKGKKALA 371
Query: 542 YVEKLIKSCQFPPAESVEECFSSFLFSNLIGFKRKARLLAYMVKCLLEAYTGRRKVDNRD 721
+V++LIKSC+FPP ESVEEC ++LF NL GFK+KAR L YMVKCL+ ++ GRRKV+NRD
Sbjct: 372 FVDRLIKSCKFPPQESVEECIKAYLFPNLSGFKQKARFLGYMVKCLVHSFIGRRKVENRD 431
Query: 722 DFRNKXXXXXXXXXXXXXXVHIKHAERRMVKAMQRDLYGDRTIHPIEHYMDSSIITNGLS 901
DFRNK HIKHAERRMVKAMQRDLYGDR + PIEHY+D+SIITNGLS
Sbjct: 432 DFRNKRLELAGELLERELRAHIKHAERRMVKAMQRDLYGDRQVQPIEHYLDASIITNGLS 491
Query: 902 RAFSTGAWSHPYKRAERTSGVVANLGRTNPLQMIAEMRRTRQHVEYTGKVGDARYP 1069
RAFSTG W HPYKR ER SGVVA L RTNPLQM A+MR+TRQ V YTG+VGDARYP
Sbjct: 492 RAFSTGHWCHPYKRMERVSGVVATLRRTNPLQMTADMRKTRQQVTYTGRVGDARYP 547
>KDO52429.1 hypothetical protein CISIN_1g001050mg [Citrus sinensis]
Length = 1173
Score = 505 bits (1300), Expect = e-167
Identities = 240/356 (67%), Positives = 286/356 (80%)
Frame = +2
Query: 2 KFKTGKEQFLDKDVSLVDTREIVIGTLPVMVKSDLCWMSKADKGDCDFDHGGYFIIKGAE 181
KFKTG+EQ++ K+V +T I+IG +PVMVKSDLCWM +KGDCDFDHGGYFIIKGAE
Sbjct: 143 KFKTGREQYIQKEVLSDETTNIIIGRIPVMVKSDLCWMKGVEKGDCDFDHGGYFIIKGAE 202
Query: 182 KTFVAQEQICLKRLWLASNPSWVVSYRNTFKRKRVYVKLLDSPKVEDIGGGEKVITVYFL 361
K FVAQEQICLKRLW++++ W V+Y++ KR R+ V+L+D K EDI GGEKV++VYFL
Sbjct: 203 KVFVAQEQICLKRLWVSNSMGWTVAYKSENKRNRLIVRLVDMSKFEDIKGGEKVLSVYFL 262
Query: 362 VTEIPIWVLFFALGVSSDKEAVNLIDADVEDGNIVNILIASIHDADKKCENFRRRGIALK 541
TEIPIW+LFFALGVSSDKE VNLID ED +I+NIL ASIHDAD KC+ FR+ ALK
Sbjct: 263 STEIPIWILFFALGVSSDKEIVNLIDFTCEDCSILNILFASIHDADNKCDEFRKGRNALK 322
Query: 542 YVEKLIKSCQFPPAESVEECFSSFLFSNLIGFKRKARLLAYMVKCLLEAYTGRRKVDNRD 721
YV+KLIK FPP ES EEC +++LF +L G K+KAR L YMVKCLL+AY+GRRK DNRD
Sbjct: 323 YVDKLIKGTTFPPGESTEECMNTYLFPSLHGTKQKARFLGYMVKCLLQAYSGRRKCDNRD 382
Query: 722 DFRNKXXXXXXXXXXXXXXVHIKHAERRMVKAMQRDLYGDRTIHPIEHYMDSSIITNGLS 901
DFRNK VHI HA +RM KA+QRDLYGDRT+ PIE+Y+D+SI+TNGLS
Sbjct: 383 DFRNKRLELAGELLERELKVHIAHARKRMAKALQRDLYGDRTVRPIEYYLDASILTNGLS 442
Query: 902 RAFSTGAWSHPYKRAERTSGVVANLGRTNPLQMIAEMRRTRQHVEYTGKVGDARYP 1069
RAFSTGAWSHP+KR ER SG+VANLGR NPLQ + ++RRTRQ V+YTGKVGDARYP
Sbjct: 443 RAFSTGAWSHPFKRTERISGIVANLGRANPLQTLVDLRRTRQQVQYTGKVGDARYP 498
>XP_006442883.1 hypothetical protein CICLE_v10018562mg [Citrus clementina]
XP_006478802.1 PREDICTED: DNA-directed RNA polymerases IV
and V subunit 2-like [Citrus sinensis] ESR56123.1
hypothetical protein CICLE_v10018562mg [Citrus
clementina]
Length = 1198
Score = 504 bits (1297), Expect = e-166
Identities = 239/356 (67%), Positives = 286/356 (80%)
Frame = +2
Query: 2 KFKTGKEQFLDKDVSLVDTREIVIGTLPVMVKSDLCWMSKADKGDCDFDHGGYFIIKGAE 181
KFKTG+EQ++ K+V + +I+IG +PVMVKSDLCWM +KGDCDFDHGGYFIIKGAE
Sbjct: 168 KFKTGREQYIQKEVLSDEATDIIIGRIPVMVKSDLCWMKGVEKGDCDFDHGGYFIIKGAE 227
Query: 182 KTFVAQEQICLKRLWLASNPSWVVSYRNTFKRKRVYVKLLDSPKVEDIGGGEKVITVYFL 361
K FVAQEQICLKRLW++++ W V+Y++ KR R+ V+L+D K EDI GGEKV++VYFL
Sbjct: 228 KVFVAQEQICLKRLWVSNSMGWTVAYKSENKRNRLIVRLVDMSKFEDIKGGEKVLSVYFL 287
Query: 362 VTEIPIWVLFFALGVSSDKEAVNLIDADVEDGNIVNILIASIHDADKKCENFRRRGIALK 541
TEIPIW+LFFALGVSSDKE VNLID ED +I+NIL ASIHDAD KC+ FR+ ALK
Sbjct: 288 STEIPIWILFFALGVSSDKEIVNLIDFTCEDCSILNILFASIHDADNKCDEFRKGRNALK 347
Query: 542 YVEKLIKSCQFPPAESVEECFSSFLFSNLIGFKRKARLLAYMVKCLLEAYTGRRKVDNRD 721
YV+KLIK FPP ES EEC +++LF +L G K+KAR L YMVKCLL+AY+GRRK DNRD
Sbjct: 348 YVDKLIKGTTFPPGESTEECMNTYLFPSLHGTKQKARFLGYMVKCLLQAYSGRRKCDNRD 407
Query: 722 DFRNKXXXXXXXXXXXXXXVHIKHAERRMVKAMQRDLYGDRTIHPIEHYMDSSIITNGLS 901
DFRNK VHI HA +RM KA+QRDLYGDRT+ PIE+Y+D+SI+TNGLS
Sbjct: 408 DFRNKRLELAGELLERELKVHIAHARKRMAKALQRDLYGDRTVRPIEYYLDASILTNGLS 467
Query: 902 RAFSTGAWSHPYKRAERTSGVVANLGRTNPLQMIAEMRRTRQHVEYTGKVGDARYP 1069
RAFSTGAWSHP+KR ER SG+VANLGR NPLQ + ++RRTRQ V+YTGKVGDARYP
Sbjct: 468 RAFSTGAWSHPFKRTERISGIVANLGRANPLQTLVDLRRTRQQVQYTGKVGDARYP 523
>XP_013442398.1 DNA-directed RNA polymerase [Medicago truncatula] KEH16423.1
DNA-directed RNA polymerase [Medicago truncatula]
Length = 517
Score = 482 bits (1241), Expect = e-166
Identities = 232/356 (65%), Positives = 281/356 (78%)
Frame = +2
Query: 2 KFKTGKEQFLDKDVSLVDTREIVIGTLPVMVKSDLCWMSKADKGDCDFDHGGYFIIKGAE 181
KFKTGKE+++D+++ L +TREI IG LPVMVKSDLCWMS+A+KGDC+FDHGGYF+IKGAE
Sbjct: 163 KFKTGKEEYIDREIKLDETREITIGRLPVMVKSDLCWMSEAEKGDCEFDHGGYFLIKGAE 222
Query: 182 KTFVAQEQICLKRLWLASNPSWVVSYRNTFKRKRVYVKLLDSPKVEDIGGGEKVITVYFL 361
K F+AQEQ+ LKRLW+++ P W V++++ KR R+ VKL++ E I GEK++TVYFL
Sbjct: 223 KIFIAQEQVFLKRLWVSNIPYWAVAFKSQMKRNRMVVKLVEG-STEGITNGEKLLTVYFL 281
Query: 362 VTEIPIWVLFFALGVSSDKEAVNLIDADVEDGNIVNILIASIHDADKKCENFRRRGIALK 541
EIP+W+LFFALGV+SDKE V+LID DG I NIL ASI +AD KCE FRR AL
Sbjct: 282 SVEIPVWILFFALGVTSDKEIVDLIDYGESDGRIENILFASIREADDKCEAFRRGKNALL 341
Query: 542 YVEKLIKSCQFPPAESVEECFSSFLFSNLIGFKRKARLLAYMVKCLLEAYTGRRKVDNRD 721
++E+ +K QFPPAES++ECF+ ++F N+ G KRKAR LAYMVK LL AYTGRRK DNRD
Sbjct: 342 FLEERVKGVQFPPAESIDECFNMYVFPNIKGLKRKARYLAYMVKVLLLAYTGRRKTDNRD 401
Query: 722 DFRNKXXXXXXXXXXXXXXVHIKHAERRMVKAMQRDLYGDRTIHPIEHYMDSSIITNGLS 901
DFRNK VH HA +RM KA+QRDLYGDR + IEHY+D+SIITNGL
Sbjct: 402 DFRNKRLELAGELLEREIKVHFAHARKRMGKALQRDLYGDRDVRQIEHYLDASIITNGLQ 461
Query: 902 RAFSTGAWSHPYKRAERTSGVVANLGRTNPLQMIAEMRRTRQHVEYTGKVGDARYP 1069
RAFSTGAW+HP+KR ER SGVVA LGRTNPLQ IAE+RRTRQ V+YTGKVGDARYP
Sbjct: 462 RAFSTGAWTHPFKRMERISGVVATLGRTNPLQTIAELRRTRQQVQYTGKVGDARYP 517
>AAY68198.1 RNA polymerase IV second largest subunit, partial [Rhododendron
macrophyllum]
Length = 1019
Score = 498 bits (1283), Expect = e-166
Identities = 237/349 (67%), Positives = 282/349 (80%)
Frame = +2
Query: 23 QFLDKDVSLVDTREIVIGTLPVMVKSDLCWMSKADKGDCDFDHGGYFIIKGAEKTFVAQE 202
Q++DKD D R+++IG +PVM+KSDLCWM+ +K DCDFDHGGYF+IKGAEKTF+AQE
Sbjct: 1 QYVDKDPISEDNRDVIIGRIPVMLKSDLCWMNGVEKSDCDFDHGGYFLIKGAEKTFIAQE 60
Query: 203 QICLKRLWLASNPSWVVSYRNTFKRKRVYVKLLDSPKVEDIGGGEKVITVYFLVTEIPIW 382
QICLKRLW++++PSW V+YR+ KRKRVY+KL + PK E I GGEKV++VYF E PIW
Sbjct: 61 QICLKRLWVSNSPSWTVAYRDVSKRKRVYIKL-EPPKREHIRGGEKVLSVYFSAVEFPIW 119
Query: 383 VLFFALGVSSDKEAVNLIDADVEDGNIVNILIASIHDADKKCENFRRRGIALKYVEKLIK 562
+LFFALG SSDKE VNLID D ED IVN+LIASI+DAD+ C+ FRR A+ + K I+
Sbjct: 120 ILFFALGASSDKEVVNLIDCDGEDSRIVNVLIASIYDADENCKGFRRGRNAINDIMKKIE 179
Query: 563 SCQFPPAESVEECFSSFLFSNLIGFKRKARLLAYMVKCLLEAYTGRRKVDNRDDFRNKXX 742
+C+FPP ES+E S++LF NL GF++KAR L YMVKCLL+AYTGRRK+DNRDDFRNK
Sbjct: 180 NCKFPPQESIEAFLSNYLFPNLSGFRQKARFLGYMVKCLLQAYTGRRKIDNRDDFRNKRL 239
Query: 743 XXXXXXXXXXXXVHIKHAERRMVKAMQRDLYGDRTIHPIEHYMDSSIITNGLSRAFSTGA 922
VH+KHAERRMVKAMQRDLYG+R IH IEHY+D+SIITNGLSRAFSTGA
Sbjct: 240 ELAGELLERELRVHVKHAERRMVKAMQRDLYGERVIHAIEHYLDASIITNGLSRAFSTGA 299
Query: 923 WSHPYKRAERTSGVVANLGRTNPLQMIAEMRRTRQHVEYTGKVGDARYP 1069
WSHPYK+ ER SGVVA L RTNPLQ IA+MR+TRQ V YTGKVGDARYP
Sbjct: 300 WSHPYKKMERISGVVATLRRTNPLQTIADMRKTRQQVSYTGKVGDARYP 348
>XP_002283296.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 2 [Vitis
vinifera] XP_010648748.1 PREDICTED: DNA-directed RNA
polymerases IV and V subunit 2 [Vitis vinifera]
Length = 1198
Score = 501 bits (1291), Expect = e-165
Identities = 240/361 (66%), Positives = 296/361 (81%), Gaps = 5/361 (1%)
Frame = +2
Query: 2 KFKTGKE-QFLDKDVSLVDTREIVIGTLPVMVKSDLCWMSKADKGDCDFDHGGYFIIKGA 178
K+KTGK+ ++++K V D R+I+IG +PVMVKS+LCWM+ ++GDC++DHGGYF+IKGA
Sbjct: 169 KYKTGKDNKYVEKKVIFEDNRDILIGRIPVMVKSELCWMNGVERGDCEYDHGGYFLIKGA 228
Query: 179 EKTFVAQEQICLKRLWLASNPSWVVSYRNTFKRKRVYVKLLDSPKVEDIGGGEKVITVYF 358
EKTF+AQEQICLKRLW++SNP+W+V+YR +KRKRVYVKL + PK E+ GGEKV+TVYF
Sbjct: 229 EKTFIAQEQICLKRLWVSSNPTWMVAYRPIWKRKRVYVKL-EPPKDENNRGGEKVLTVYF 287
Query: 359 LVTEIPIWVLFFALGVSSDKEAVNLIDADVEDGNIVNILIASIHDADKKCEN----FRRR 526
TEIPIW+LFFALG SSDKE V+LID +++D I NIL+ASIH+AD++ E FRR+
Sbjct: 288 SSTEIPIWILFFALGASSDKEVVDLIDFNIDDAGISNILVASIHEADREAEKKGMYFRRQ 347
Query: 527 GIALKYVEKLIKSCQFPPAESVEECFSSFLFSNLIGFKRKARLLAYMVKCLLEAYTGRRK 706
G A+ +V+KL+KSC+FPP ES++EC S +LF N G K+KAR L YMVKCLL+AYTGRRK
Sbjct: 348 GNAISFVDKLVKSCKFPPGESIQECISKYLFPNFSGVKQKARFLGYMVKCLLQAYTGRRK 407
Query: 707 VDNRDDFRNKXXXXXXXXXXXXXXVHIKHAERRMVKAMQRDLYGDRTIHPIEHYMDSSII 886
DNRDDFRNK VHI+HAERRMVKAMQR+LYGDR + PIE+Y+D+SII
Sbjct: 408 CDNRDDFRNKRLELAGELLERELRVHIRHAERRMVKAMQRELYGDRDLRPIENYLDASII 467
Query: 887 TNGLSRAFSTGAWSHPYKRAERTSGVVANLGRTNPLQMIAEMRRTRQHVEYTGKVGDARY 1066
TNGLSRAFSTG WSHP+KR ER SGVVA L RTNPLQM A+MR+TRQ V+YTGKVGDARY
Sbjct: 468 TNGLSRAFSTGQWSHPFKRMERISGVVATLRRTNPLQMTADMRKTRQQVQYTGKVGDARY 527
Query: 1067 P 1069
P
Sbjct: 528 P 528
>CBI21137.3 unnamed protein product, partial [Vitis vinifera]
Length = 1220
Score = 501 bits (1291), Expect = e-165
Identities = 240/361 (66%), Positives = 296/361 (81%), Gaps = 5/361 (1%)
Frame = +2
Query: 2 KFKTGKE-QFLDKDVSLVDTREIVIGTLPVMVKSDLCWMSKADKGDCDFDHGGYFIIKGA 178
K+KTGK+ ++++K V D R+I+IG +PVMVKS+LCWM+ ++GDC++DHGGYF+IKGA
Sbjct: 205 KYKTGKDNKYVEKKVIFEDNRDILIGRIPVMVKSELCWMNGVERGDCEYDHGGYFLIKGA 264
Query: 179 EKTFVAQEQICLKRLWLASNPSWVVSYRNTFKRKRVYVKLLDSPKVEDIGGGEKVITVYF 358
EKTF+AQEQICLKRLW++SNP+W+V+YR +KRKRVYVKL + PK E+ GGEKV+TVYF
Sbjct: 265 EKTFIAQEQICLKRLWVSSNPTWMVAYRPIWKRKRVYVKL-EPPKDENNRGGEKVLTVYF 323
Query: 359 LVTEIPIWVLFFALGVSSDKEAVNLIDADVEDGNIVNILIASIHDADKKCEN----FRRR 526
TEIPIW+LFFALG SSDKE V+LID +++D I NIL+ASIH+AD++ E FRR+
Sbjct: 324 SSTEIPIWILFFALGASSDKEVVDLIDFNIDDAGISNILVASIHEADREAEKKGMYFRRQ 383
Query: 527 GIALKYVEKLIKSCQFPPAESVEECFSSFLFSNLIGFKRKARLLAYMVKCLLEAYTGRRK 706
G A+ +V+KL+KSC+FPP ES++EC S +LF N G K+KAR L YMVKCLL+AYTGRRK
Sbjct: 384 GNAISFVDKLVKSCKFPPGESIQECISKYLFPNFSGVKQKARFLGYMVKCLLQAYTGRRK 443
Query: 707 VDNRDDFRNKXXXXXXXXXXXXXXVHIKHAERRMVKAMQRDLYGDRTIHPIEHYMDSSII 886
DNRDDFRNK VHI+HAERRMVKAMQR+LYGDR + PIE+Y+D+SII
Sbjct: 444 CDNRDDFRNKRLELAGELLERELRVHIRHAERRMVKAMQRELYGDRDLRPIENYLDASII 503
Query: 887 TNGLSRAFSTGAWSHPYKRAERTSGVVANLGRTNPLQMIAEMRRTRQHVEYTGKVGDARY 1066
TNGLSRAFSTG WSHP+KR ER SGVVA L RTNPLQM A+MR+TRQ V+YTGKVGDARY
Sbjct: 504 TNGLSRAFSTGQWSHPFKRMERISGVVATLRRTNPLQMTADMRKTRQQVQYTGKVGDARY 563
Query: 1067 P 1069
P
Sbjct: 564 P 564