BLASTX nr result

ID: Panax24_contig00030800 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00030800
         (570 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017215280.1 PREDICTED: AT-hook motif nuclear-localized protei...    75   1e-12
KVH95255.1 protein of unknown function DUF296 [Cynara cardunculu...    60   2e-07
KVH91734.1 protein of unknown function DUF296 [Cynara cardunculu...    59   8e-07
XP_011082370.1 PREDICTED: uncharacterized protein LOC105165162 [...    59   8e-07
XP_011070240.1 PREDICTED: putative DNA-binding protein ESCAROLA ...    57   3e-06

>XP_017215280.1 PREDICTED: AT-hook motif nuclear-localized protein 13-like [Daucus
           carota subsp. sativus] KZM87867.1 hypothetical protein
           DCAR_024968 [Daucus carota subsp. sativus]
          Length = 382

 Score = 75.5 bits (184), Expect = 1e-12
 Identities = 43/90 (47%), Positives = 57/90 (63%), Gaps = 11/90 (12%)
 Frame = -2

Query: 239 VVMMAPPLNSYTPQIPNHNTTN----------NIDASTTTLMQQNPG-FPFNSVAQKPLD 93
           V+MMAP LN Y PQI ++N  N          NID+++  LMQ +P  F +NS   KPL+
Sbjct: 39  VMMMAPQLNPYAPQIQHNNNGNTNNNNNNAGINIDSASAALMQHDPNRFTYNSSEPKPLE 98

Query: 92  SMNSQYTDGSSPSSGFRAGGFSIEPARKKR 3
           ++NSQY+DGS+        GFS+EPARKKR
Sbjct: 99  AINSQYSDGSA--------GFSMEPARKKR 120


>KVH95255.1 protein of unknown function DUF296 [Cynara cardunculus var.
           scolymus]
          Length = 380

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 39/86 (45%), Positives = 48/86 (55%), Gaps = 9/86 (10%)
 Frame = -2

Query: 233 MMAPPLNSYTPQIPNHN---------TTNNIDASTTTLMQQNPGFPFNSVAQKPLDSMNS 81
           MM PP NSY+    +H+         T NN +A+  +       FPFN+         + 
Sbjct: 30  MMMPP-NSYSTH--HHHLSNTSNTAITNNNKNANIISPSSMQQRFPFNA---------SD 77

Query: 80  QYTDGSSPSSGFRAGGFSIEPARKKR 3
           QY DGSSPS GFRAGG+SIEPARKKR
Sbjct: 78  QYGDGSSPSGGFRAGGYSIEPARKKR 103


>KVH91734.1 protein of unknown function DUF296 [Cynara cardunculus var.
           scolymus]
          Length = 382

 Score = 58.5 bits (140), Expect = 8e-07
 Identities = 37/83 (44%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
 Frame = -2

Query: 233 MMAPP--LNSYTPQIPNHNTT----NNIDASTTTLMQQNPGFPFNSVAQKPLDSMNSQYT 72
           MM PP   N++   +PN++ T    NN    T   MQQ   FPF++         + Q+ 
Sbjct: 28  MMMPPNSYNTHHHHLPNNSNTAAPANNNSMITHDSMQQR--FPFDA---------SDQFG 76

Query: 71  DGSSPSSGFRAGGFSIEPARKKR 3
           DGSSP  GFR+GGF+IEPARKKR
Sbjct: 77  DGSSPPGGFRSGGFNIEPARKKR 99


>XP_011082370.1 PREDICTED: uncharacterized protein LOC105165162 [Sesamum indicum]
          Length = 386

 Score = 58.5 bits (140), Expect = 8e-07
 Identities = 42/85 (49%), Positives = 49/85 (57%), Gaps = 12/85 (14%)
 Frame = -2

Query: 221 PLNSYTPQIPNHNTTNNIDASTTT----LMQQNPGFPFNSVA--------QKPLDSMNSQ 78
           P NSY  Q+PN N++ N   S TT    +  QNP FPFNS+A         KPLD + S+
Sbjct: 42  PNNSY--QLPNSNSSVNPTTSATTNTAIMHHQNPRFPFNSMAAAAAAAAGPKPLDHIQSE 99

Query: 77  YTDGSSPSSGFRAGGFSIEPARKKR 3
                SPS G  A GFSIEPARKKR
Sbjct: 100 ----GSPSGGGGA-GFSIEPARKKR 119


>XP_011070240.1 PREDICTED: putative DNA-binding protein ESCAROLA [Sesamum indicum]
          Length = 400

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 39/86 (45%), Positives = 49/86 (56%), Gaps = 12/86 (13%)
 Frame = -2

Query: 224 PPLNSYTPQIPNHNT----TNNIDASTTTLMQQNPGFPFNSV--------AQKPLDSMNS 81
           P  NSY   +PN N+    T++  ++T  + QQNP FPFNS+        A KPLD    
Sbjct: 51  PSNNSYP--LPNSNSSVAPTSSATSNTAMMHQQNPRFPFNSMAAPAAAAPAPKPLD---H 105

Query: 80  QYTDGSSPSSGFRAGGFSIEPARKKR 3
           QY+DGS   SG   G F+IEP RKKR
Sbjct: 106 QYSDGSPSGSG--GGWFNIEPTRKKR 129


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