BLASTX nr result
ID: Panax24_contig00030735
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax24_contig00030735
(418 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_009340266.1 PREDICTED: pentatricopeptide repeat-containing pr... 69 8e-11
XP_008383264.1 PREDICTED: pentatricopeptide repeat-containing pr... 69 8e-11
XP_008223593.1 PREDICTED: pentatricopeptide repeat-containing pr... 68 2e-10
XP_007223989.1 hypothetical protein PRUPE_ppa014757mg [Prunus pe... 67 2e-10
XP_017215117.1 PREDICTED: pentatricopeptide repeat-containing pr... 62 2e-08
XP_011008234.1 PREDICTED: pentatricopeptide repeat-containing pr... 62 2e-08
XP_002299387.2 pentatricopeptide repeat-containing family protei... 62 2e-08
CBI27235.3 unnamed protein product, partial [Vitis vinifera] 61 3e-08
XP_006468579.1 PREDICTED: pentatricopeptide repeat-containing pr... 61 3e-08
XP_006448595.1 hypothetical protein CICLE_v10014221mg [Citrus cl... 61 3e-08
XP_002275546.2 PREDICTED: pentatricopeptide repeat-containing pr... 61 3e-08
KDO77215.1 hypothetical protein CISIN_1g002772mg [Citrus sinensis] 61 4e-08
XP_010260746.1 PREDICTED: pentatricopeptide repeat-containing pr... 60 8e-08
GAV75044.1 PPR domain-containing protein/PPR_2 domain-containing... 60 1e-07
XP_012065979.1 PREDICTED: pentatricopeptide repeat-containing pr... 59 2e-07
XP_004295518.1 PREDICTED: pentatricopeptide repeat-containing pr... 57 9e-07
XP_011100606.1 PREDICTED: pentatricopeptide repeat-containing pr... 56 2e-06
XP_018848683.1 PREDICTED: pentatricopeptide repeat-containing pr... 56 2e-06
EEF29678.1 pentatricopeptide repeat-containing protein, putative... 55 4e-06
XP_015583045.1 PREDICTED: pentatricopeptide repeat-containing pr... 55 4e-06
>XP_009340266.1 PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Pyrus x bretschneideri]
Length = 904
Score = 68.6 bits (166), Expect = 8e-11
Identities = 29/39 (74%), Positives = 36/39 (92%)
Frame = +2
Query: 302 ATWIESLRSLSRSNHFREAICTYIEMTMAGIQPNNFAFP 418
ATW+E+LRS +RSNHFREAI TYIEMT++G+ P+NFAFP
Sbjct: 66 ATWVETLRSQTRSNHFREAISTYIEMTLSGVAPDNFAFP 104
>XP_008383264.1 PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Malus domestica]
Length = 905
Score = 68.6 bits (166), Expect = 8e-11
Identities = 29/39 (74%), Positives = 36/39 (92%)
Frame = +2
Query: 302 ATWIESLRSLSRSNHFREAICTYIEMTMAGIQPNNFAFP 418
ATW+E+LRS +RSNHFREAI TYIEMT++G+ P+NFAFP
Sbjct: 67 ATWVETLRSQTRSNHFREAISTYIEMTLSGVAPDNFAFP 105
>XP_008223593.1 PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Prunus mume]
Length = 901
Score = 67.8 bits (164), Expect = 2e-10
Identities = 30/39 (76%), Positives = 36/39 (92%)
Frame = +2
Query: 302 ATWIESLRSLSRSNHFREAICTYIEMTMAGIQPNNFAFP 418
A+WIE+LRS +RSNHFREAI TYIEMT++GI P+NFAFP
Sbjct: 63 ASWIETLRSQTRSNHFREAILTYIEMTLSGIAPDNFAFP 101
>XP_007223989.1 hypothetical protein PRUPE_ppa014757mg [Prunus persica] ONI27715.1
hypothetical protein PRUPE_1G101200 [Prunus persica]
Length = 901
Score = 67.4 bits (163), Expect = 2e-10
Identities = 30/39 (76%), Positives = 36/39 (92%)
Frame = +2
Query: 302 ATWIESLRSLSRSNHFREAICTYIEMTMAGIQPNNFAFP 418
A+WIE+LRS +RSNHFREAI TYIEMT++GI P+NFAFP
Sbjct: 63 ASWIETLRSQTRSNHFREAILTYIEMTLSGIVPDNFAFP 101
>XP_017215117.1 PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Daucus carota subsp. sativus]
XP_017215119.1 PREDICTED: pentatricopeptide
repeat-containing protein At3g57430, chloroplastic
[Daucus carota subsp. sativus] XP_017215120.1 PREDICTED:
pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Daucus carota subsp. sativus]
Length = 875
Score = 61.6 bits (148), Expect = 2e-08
Identities = 27/39 (69%), Positives = 34/39 (87%)
Frame = +2
Query: 302 ATWIESLRSLSRSNHFREAICTYIEMTMAGIQPNNFAFP 418
A+WIESLRSL+RSN F++A+ TY +M MAG+ PNNFAFP
Sbjct: 39 ASWIESLRSLTRSNQFQQALYTYNDMIMAGVVPNNFAFP 77
>XP_011008234.1 PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Populus euphratica]
Length = 886
Score = 61.6 bits (148), Expect = 2e-08
Identities = 29/39 (74%), Positives = 33/39 (84%)
Frame = +2
Query: 302 ATWIESLRSLSRSNHFREAICTYIEMTMAGIQPNNFAFP 418
A+WIESLRS SRSN FREAI TYIEM +G+ P+NFAFP
Sbjct: 48 ASWIESLRSKSRSNLFREAISTYIEMIGSGVSPDNFAFP 86
>XP_002299387.2 pentatricopeptide repeat-containing family protein [Populus
trichocarpa] EEE84192.2 pentatricopeptide
repeat-containing family protein [Populus trichocarpa]
Length = 894
Score = 61.6 bits (148), Expect = 2e-08
Identities = 29/39 (74%), Positives = 33/39 (84%)
Frame = +2
Query: 302 ATWIESLRSLSRSNHFREAICTYIEMTMAGIQPNNFAFP 418
A+WIESLRS SRSN FREAI TYIEM +G+ P+NFAFP
Sbjct: 56 ASWIESLRSRSRSNLFREAISTYIEMIGSGVSPDNFAFP 94
>CBI27235.3 unnamed protein product, partial [Vitis vinifera]
Length = 696
Score = 61.2 bits (147), Expect = 3e-08
Identities = 26/39 (66%), Positives = 35/39 (89%)
Frame = +2
Query: 302 ATWIESLRSLSRSNHFREAICTYIEMTMAGIQPNNFAFP 418
A+W+++LRS +RSN FREAI TYIEMT++G +P+NFAFP
Sbjct: 58 ASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFP 96
>XP_006468579.1 PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Citrus sinensis]
Length = 882
Score = 61.2 bits (147), Expect = 3e-08
Identities = 28/38 (73%), Positives = 33/38 (86%)
Frame = +2
Query: 305 TWIESLRSLSRSNHFREAICTYIEMTMAGIQPNNFAFP 418
+WIESLRS +RSN FREAI +YIEMT + IQP+NFAFP
Sbjct: 44 SWIESLRSQTRSNQFREAILSYIEMTRSDIQPDNFAFP 81
>XP_006448595.1 hypothetical protein CICLE_v10014221mg [Citrus clementina]
ESR61835.1 hypothetical protein CICLE_v10014221mg
[Citrus clementina]
Length = 882
Score = 61.2 bits (147), Expect = 3e-08
Identities = 28/38 (73%), Positives = 33/38 (86%)
Frame = +2
Query: 305 TWIESLRSLSRSNHFREAICTYIEMTMAGIQPNNFAFP 418
+WIESLRS +RSN FREAI +YIEMT + IQP+NFAFP
Sbjct: 44 SWIESLRSQTRSNQFREAILSYIEMTRSDIQPDNFAFP 81
>XP_002275546.2 PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Vitis vinifera]
Length = 896
Score = 61.2 bits (147), Expect = 3e-08
Identities = 26/39 (66%), Positives = 35/39 (89%)
Frame = +2
Query: 302 ATWIESLRSLSRSNHFREAICTYIEMTMAGIQPNNFAFP 418
A+W+++LRS +RSN FREAI TYIEMT++G +P+NFAFP
Sbjct: 58 ASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFP 96
>KDO77215.1 hypothetical protein CISIN_1g002772mg [Citrus sinensis]
Length = 882
Score = 60.8 bits (146), Expect = 4e-08
Identities = 28/38 (73%), Positives = 33/38 (86%)
Frame = +2
Query: 305 TWIESLRSLSRSNHFREAICTYIEMTMAGIQPNNFAFP 418
+WIESLRS +RSN FREAI +YIEMT + IQP+NFAFP
Sbjct: 44 SWIESLRSEARSNQFREAILSYIEMTRSDIQPDNFAFP 81
>XP_010260746.1 PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic isoform X1 [Nelumbo nucifera]
Length = 902
Score = 60.1 bits (144), Expect = 8e-08
Identities = 27/37 (72%), Positives = 32/37 (86%)
Frame = +2
Query: 308 WIESLRSLSRSNHFREAICTYIEMTMAGIQPNNFAFP 418
WIE+LRS +RSN FREA+ TY+EMT AGI P+NFAFP
Sbjct: 60 WIETLRSHTRSNLFREALSTYVEMTTAGIPPDNFAFP 96
>GAV75044.1 PPR domain-containing protein/PPR_2 domain-containing protein/PPR_3
domain-containing protein/DYW_deaminase
domain-containing protein [Cephalotus follicularis]
Length = 900
Score = 59.7 bits (143), Expect = 1e-07
Identities = 28/39 (71%), Positives = 33/39 (84%)
Frame = +2
Query: 302 ATWIESLRSLSRSNHFREAICTYIEMTMAGIQPNNFAFP 418
A+WIESLRS +RSN F EAI TYIEMT++GI P+N AFP
Sbjct: 65 ASWIESLRSKTRSNLFHEAILTYIEMTLSGIPPDNTAFP 103
>XP_012065979.1 PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Jatropha curcas] KDP43137.1 hypothetical
protein JCGZ_26670 [Jatropha curcas]
Length = 889
Score = 58.9 bits (141), Expect = 2e-07
Identities = 26/39 (66%), Positives = 33/39 (84%)
Frame = +2
Query: 302 ATWIESLRSLSRSNHFREAICTYIEMTMAGIQPNNFAFP 418
A+WIESLR +RSN FRE+I TYIEM ++G+ P+NFAFP
Sbjct: 59 ASWIESLRFSTRSNLFRESISTYIEMILSGVSPDNFAFP 97
>XP_004295518.1 PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Fragaria vesca subsp. vesca]
Length = 893
Score = 57.0 bits (136), Expect = 9e-07
Identities = 23/38 (60%), Positives = 32/38 (84%)
Frame = +2
Query: 305 TWIESLRSLSRSNHFREAICTYIEMTMAGIQPNNFAFP 418
TWI+++R+ +RS H+ EAI TYI MT +GI+P+NFAFP
Sbjct: 56 TWIDTIRTQTRSGHYNEAISTYINMTRSGIRPDNFAFP 93
>XP_011100606.1 PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Sesamum indicum]
Length = 877
Score = 55.8 bits (133), Expect = 2e-06
Identities = 23/38 (60%), Positives = 33/38 (86%)
Frame = +2
Query: 305 TWIESLRSLSRSNHFREAICTYIEMTMAGIQPNNFAFP 418
+W+ESLRSL+RSN F +AI T+I+M ++G+ P+NFAFP
Sbjct: 40 SWVESLRSLTRSNSFPQAITTFIQMQVSGVLPDNFAFP 77
>XP_018848683.1 PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Juglans regia]
Length = 913
Score = 55.8 bits (133), Expect = 2e-06
Identities = 26/39 (66%), Positives = 33/39 (84%), Gaps = 1/39 (2%)
Frame = +2
Query: 305 TWIESLRSLSRSNHFREAICTYIEM-TMAGIQPNNFAFP 418
+W+ESLR +RSN FREAI TY++M T+AGI P+NFAFP
Sbjct: 77 SWVESLRFQARSNLFREAILTYVQMLTLAGISPDNFAFP 115
>EEF29678.1 pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 679
Score = 55.1 bits (131), Expect = 4e-06
Identities = 23/39 (58%), Positives = 33/39 (84%)
Frame = +2
Query: 302 ATWIESLRSLSRSNHFREAICTYIEMTMAGIQPNNFAFP 418
A+WIESLR +RSN FREAI TY++M ++G+ P+++AFP
Sbjct: 43 ASWIESLRFNTRSNLFREAISTYVDMILSGVSPDSYAFP 81
>XP_015583045.1 PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Ricinus communis]
Length = 877
Score = 55.1 bits (131), Expect = 4e-06
Identities = 23/39 (58%), Positives = 33/39 (84%)
Frame = +2
Query: 302 ATWIESLRSLSRSNHFREAICTYIEMTMAGIQPNNFAFP 418
A+WIESLR +RSN FREAI TY++M ++G+ P+++AFP
Sbjct: 43 ASWIESLRFNTRSNLFREAISTYVDMILSGVSPDSYAFP 81