BLASTX nr result

ID: Panax24_contig00030711 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00030711
         (724 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ABX75362.1 hypothetical protein LBL8, partial [Panax quinquefolius]    67   8e-10
ABX75361.1 hypothetical protein LBL7, partial [Panax quinquefolius]    67   8e-10
XP_011628832.1 PREDICTED: ubiquitin domain-containing protein DS...    62   2e-07
ERM96134.1 hypothetical protein AMTR_s00001p00026840 [Amborella ...    62   2e-07
XP_011628842.1 PREDICTED: ubiquitin domain-containing protein DS...    60   5e-07
XP_011040790.1 PREDICTED: ubiquitin domain-containing protein DS...    59   2e-06
XP_006384838.1 ubiquitin family protein [Populus trichocarpa] ER...    59   2e-06
XP_010941415.1 PREDICTED: ubiquitin domain-containing protein DS...    59   2e-06
XP_010530962.1 PREDICTED: ubiquitin domain-containing protein DS...    58   3e-06
XP_017436821.1 PREDICTED: ubiquitin domain-containing protein DS...    58   3e-06
XP_010941416.1 PREDICTED: ubiquitin domain-containing protein DS...    58   3e-06
XP_010530961.1 PREDICTED: ubiquitin domain-containing protein DS...    58   3e-06
XP_008812218.1 PREDICTED: ubiquitin domain-containing protein DS...    58   3e-06
XP_007199777.1 hypothetical protein PRUPE_ppa003711mg [Prunus pe...    58   3e-06
XP_008235954.1 PREDICTED: ubiquitin domain-containing protein DS...    58   3e-06
XP_010530960.1 PREDICTED: ubiquitin domain-containing protein DS...    58   3e-06
XP_004290059.1 PREDICTED: ubiquitin domain-containing protein DS...    57   6e-06
XP_010548158.1 PREDICTED: ubiquitin domain-containing protein DS...    57   6e-06
XP_010548157.1 PREDICTED: ubiquitin domain-containing protein DS...    57   6e-06
XP_008812227.1 PREDICTED: ubiquitin domain-containing protein DS...    57   8e-06

>ABX75362.1 hypothetical protein LBL8, partial [Panax quinquefolius]
          Length = 249

 Score = 67.4 bits (163), Expect = 8e-10
 Identities = 32/49 (65%), Positives = 39/49 (79%), Gaps = 3/49 (6%)
 Frame = -2

Query: 723 ALVGNQIRGQVEDQSTSPSTMGSDANSGSSVPNFKPLPNPW---SSTAG 586
           AL+G+Q+ GQVED+  +PSTMG D+NSGSSVPN  PLPNPW   S+T G
Sbjct: 36  ALLGSQVGGQVEDRPITPSTMGLDSNSGSSVPNSNPLPNPWRCASATGG 84


>ABX75361.1 hypothetical protein LBL7, partial [Panax quinquefolius]
          Length = 249

 Score = 67.4 bits (163), Expect = 8e-10
 Identities = 32/49 (65%), Positives = 39/49 (79%), Gaps = 3/49 (6%)
 Frame = -2

Query: 723 ALVGNQIRGQVEDQSTSPSTMGSDANSGSSVPNFKPLPNPW---SSTAG 586
           AL+G+Q+ GQVED+  +PSTMG D+NSGSSVPN  PLPNPW   S+T G
Sbjct: 36  ALLGSQVGGQVEDRPITPSTMGLDSNSGSSVPNSNPLPNPWRCASATGG 84


>XP_011628832.1 PREDICTED: ubiquitin domain-containing protein DSK2b isoform X1
           [Amborella trichopoda] XP_011628836.1 PREDICTED:
           ubiquitin domain-containing protein DSK2b isoform X2
           [Amborella trichopoda]
          Length = 539

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 28/46 (60%), Positives = 34/46 (73%)
 Frame = -2

Query: 723 ALVGNQIRGQVEDQSTSPSTMGSDANSGSSVPNFKPLPNPWSSTAG 586
           AL+GNQ  GQ  D+S +PST GS+A +GS VPN  PLPNPWS+  G
Sbjct: 287 ALLGNQGAGQPRDRSHNPSTTGSEATTGSPVPNTNPLPNPWSNATG 332


>ERM96134.1 hypothetical protein AMTR_s00001p00026840 [Amborella trichopoda]
          Length = 578

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 28/46 (60%), Positives = 34/46 (73%)
 Frame = -2

Query: 723 ALVGNQIRGQVEDQSTSPSTMGSDANSGSSVPNFKPLPNPWSSTAG 586
           AL+GNQ  GQ  D+S +PST GS+A +GS VPN  PLPNPWS+  G
Sbjct: 287 ALLGNQGAGQPRDRSHNPSTTGSEATTGSPVPNTNPLPNPWSNATG 332


>XP_011628842.1 PREDICTED: ubiquitin domain-containing protein DSK2b isoform X3
           [Amborella trichopoda]
          Length = 537

 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 28/45 (62%), Positives = 34/45 (75%)
 Frame = -2

Query: 723 ALVGNQIRGQVEDQSTSPSTMGSDANSGSSVPNFKPLPNPWSSTA 589
           AL+GNQ  GQ  D+S +PST GS+A +GS VPN  PLPNPWS+ A
Sbjct: 287 ALLGNQGAGQPRDRSHNPSTTGSEATTGSPVPNTNPLPNPWSNGA 331


>XP_011040790.1 PREDICTED: ubiquitin domain-containing protein DSK2b-like [Populus
           euphratica]
          Length = 567

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 28/54 (51%), Positives = 36/54 (66%)
 Frame = -2

Query: 723 ALVGNQIRGQVEDQSTSPSTMGSDANSGSSVPNFKPLPNPWSSTAGQ*RLDSKT 562
           AL+GNQ   QV D S +PST GS+A  G + PN  PLPNPW++ AG  + +S T
Sbjct: 305 ALLGNQGGTQVRDASNNPSTTGSEATGGLTAPNTNPLPNPWNNAAGGTQTNSTT 358


>XP_006384838.1 ubiquitin family protein [Populus trichocarpa] ERP62635.1 ubiquitin
           family protein [Populus trichocarpa]
          Length = 567

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 28/54 (51%), Positives = 36/54 (66%)
 Frame = -2

Query: 723 ALVGNQIRGQVEDQSTSPSTMGSDANSGSSVPNFKPLPNPWSSTAGQ*RLDSKT 562
           AL+GNQ   QV D S +PST GS+A  G + PN  PLPNPW++ AG  + +S T
Sbjct: 305 ALLGNQGGTQVRDASNNPSTTGSEATGGLTAPNTNPLPNPWNNAAGGTQTNSTT 358


>XP_010941415.1 PREDICTED: ubiquitin domain-containing protein DSK2a-like isoform
           X1 [Elaeis guineensis]
          Length = 554

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 27/46 (58%), Positives = 33/46 (71%)
 Frame = -2

Query: 723 ALVGNQIRGQVEDQSTSPSTMGSDANSGSSVPNFKPLPNPWSSTAG 586
           AL+GNQ   Q  D S +PST GS+A +GS+ PN  PLPNPWS+ AG
Sbjct: 293 ALLGNQGATQSRDPSPNPSTTGSEATTGSAEPNASPLPNPWSNAAG 338


>XP_010530962.1 PREDICTED: ubiquitin domain-containing protein DSK2b-like isoform
           X3 [Tarenaya hassleriana]
          Length = 487

 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 26/47 (55%), Positives = 33/47 (70%)
 Frame = -2

Query: 723 ALVGNQIRGQVEDQSTSPSTMGSDANSGSSVPNFKPLPNPWSSTAGQ 583
           AL+GNQ   Q  D S +PST  ++  +G+SVPN  PLPNPWS+T GQ
Sbjct: 299 ALLGNQGATQGRDASNNPSTANTETGTGNSVPNSNPLPNPWSATGGQ 345


>XP_017436821.1 PREDICTED: ubiquitin domain-containing protein DSK2a-like isoform
           X3 [Vigna angularis]
          Length = 542

 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 25/38 (65%), Positives = 29/38 (76%)
 Frame = -2

Query: 699 GQVEDQSTSPSTMGSDANSGSSVPNFKPLPNPWSSTAG 586
           G   DQST+PST  S+A +GS +PN  PLPNPWSSTAG
Sbjct: 287 GHARDQSTNPSTTSSEATAGSPLPNTNPLPNPWSSTAG 324


>XP_010941416.1 PREDICTED: ubiquitin domain-containing protein DSK2a-like isoform
           X2 [Elaeis guineensis]
          Length = 553

 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 28/65 (43%), Positives = 39/65 (60%)
 Frame = -2

Query: 723 ALVGNQIRGQVEDQSTSPSTMGSDANSGSSVPNFKPLPNPWSSTAGQ*RLDSKTDAIETC 544
           AL+GNQ   Q  D S +PST GS+A +GS+ PN  PLPNPWS+  G    +S++      
Sbjct: 293 ALLGNQGATQSRDPSPNPSTTGSEATTGSAEPNASPLPNPWSNAGGPQTTNSRSSPASDA 352

Query: 543 KHASV 529
           + + V
Sbjct: 353 RTSGV 357


>XP_010530961.1 PREDICTED: ubiquitin domain-containing protein DSK2b-like isoform
           X2 [Tarenaya hassleriana]
          Length = 553

 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 26/47 (55%), Positives = 33/47 (70%)
 Frame = -2

Query: 723 ALVGNQIRGQVEDQSTSPSTMGSDANSGSSVPNFKPLPNPWSSTAGQ 583
           AL+GNQ   Q  D S +PST  ++  +G+SVPN  PLPNPWS+T GQ
Sbjct: 299 ALLGNQGATQGRDASNNPSTANTETGTGNSVPNSNPLPNPWSATGGQ 345


>XP_008812218.1 PREDICTED: ubiquitin domain-containing protein DSK2a-like isoform
           X2 [Phoenix dactylifera]
          Length = 554

 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 27/46 (58%), Positives = 32/46 (69%)
 Frame = -2

Query: 723 ALVGNQIRGQVEDQSTSPSTMGSDANSGSSVPNFKPLPNPWSSTAG 586
           AL+GNQ   Q  D S +PST GS+A +GS+ PN  PLPNPW S AG
Sbjct: 294 ALLGNQGATQSRDPSPNPSTTGSEATTGSAEPNANPLPNPWGSAAG 339


>XP_007199777.1 hypothetical protein PRUPE_ppa003711mg [Prunus persica] ONH92478.1
           hypothetical protein PRUPE_8G178100 [Prunus persica]
          Length = 555

 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 26/46 (56%), Positives = 31/46 (67%)
 Frame = -2

Query: 723 ALVGNQIRGQVEDQSTSPSTMGSDANSGSSVPNFKPLPNPWSSTAG 586
           AL+GNQ   QV D S +PST GS+  +GS  PN  PLPNPW +T G
Sbjct: 294 ALLGNQGGAQVRDGSNNPSTTGSETTAGSVAPNTNPLPNPWGNTVG 339


>XP_008235954.1 PREDICTED: ubiquitin domain-containing protein DSK2a-like [Prunus
           mume]
          Length = 556

 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 26/46 (56%), Positives = 31/46 (67%)
 Frame = -2

Query: 723 ALVGNQIRGQVEDQSTSPSTMGSDANSGSSVPNFKPLPNPWSSTAG 586
           AL+GNQ   QV D S +PST GS+  +GS  PN  PLPNPW +T G
Sbjct: 295 ALLGNQGGAQVRDGSNNPSTTGSETTAGSVAPNTNPLPNPWGNTVG 340


>XP_010530960.1 PREDICTED: ubiquitin domain-containing protein DSK2b-like isoform
           X1 [Tarenaya hassleriana]
          Length = 559

 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 26/47 (55%), Positives = 33/47 (70%)
 Frame = -2

Query: 723 ALVGNQIRGQVEDQSTSPSTMGSDANSGSSVPNFKPLPNPWSSTAGQ 583
           AL+GNQ   Q  D S +PST  ++  +G+SVPN  PLPNPWS+T GQ
Sbjct: 299 ALLGNQGATQGRDASNNPSTANTETGTGNSVPNSNPLPNPWSATGGQ 345


>XP_004290059.1 PREDICTED: ubiquitin domain-containing protein DSK2a [Fragaria
           vesca subsp. vesca]
          Length = 559

 Score = 57.4 bits (137), Expect = 6e-06
 Identities = 24/46 (52%), Positives = 33/46 (71%)
 Frame = -2

Query: 723 ALVGNQIRGQVEDQSTSPSTMGSDANSGSSVPNFKPLPNPWSSTAG 586
           AL+GNQ   Q  + + +PST GS+  +GS++PN  PLPNPWS+T G
Sbjct: 291 ALLGNQGGAQARNGTNNPSTTGSETTAGSAIPNANPLPNPWSNTTG 336


>XP_010548158.1 PREDICTED: ubiquitin domain-containing protein DSK2b-like isoform
           X2 [Tarenaya hassleriana]
          Length = 562

 Score = 57.4 bits (137), Expect = 6e-06
 Identities = 26/47 (55%), Positives = 32/47 (68%)
 Frame = -2

Query: 723 ALVGNQIRGQVEDQSTSPSTMGSDANSGSSVPNFKPLPNPWSSTAGQ 583
           AL+GNQ   Q  D S +PST  ++  +G+SVPN  PLPNPWS T GQ
Sbjct: 301 ALLGNQGAVQGRDASNNPSTTSAETGTGNSVPNANPLPNPWSGTGGQ 347


>XP_010548157.1 PREDICTED: ubiquitin domain-containing protein DSK2b-like isoform
           X1 [Tarenaya hassleriana]
          Length = 564

 Score = 57.4 bits (137), Expect = 6e-06
 Identities = 26/47 (55%), Positives = 32/47 (68%)
 Frame = -2

Query: 723 ALVGNQIRGQVEDQSTSPSTMGSDANSGSSVPNFKPLPNPWSSTAGQ 583
           AL+GNQ   Q  D S +PST  ++  +G+SVPN  PLPNPWS T GQ
Sbjct: 301 ALLGNQGAVQGRDASNNPSTTSAETGTGNSVPNANPLPNPWSGTGGQ 347


>XP_008812227.1 PREDICTED: ubiquitin domain-containing protein DSK2a-like isoform
           X3 [Phoenix dactylifera]
          Length = 553

 Score = 57.0 bits (136), Expect = 8e-06
 Identities = 27/54 (50%), Positives = 35/54 (64%)
 Frame = -2

Query: 723 ALVGNQIRGQVEDQSTSPSTMGSDANSGSSVPNFKPLPNPWSSTAGQ*RLDSKT 562
           AL+GNQ   Q  D S +PST GS+A +GS+ PN  PLPNPW S  G    +S++
Sbjct: 294 ALLGNQGATQSRDPSPNPSTTGSEATTGSAEPNANPLPNPWGSAGGPQTTNSRS 347


Top