BLASTX nr result
ID: Panax24_contig00030604
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax24_contig00030604
(382 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_008340723.1 PREDICTED: DNA mismatch repair protein MSH4-like ... 173 2e-53
KVH95538.1 DNA mismatch repair protein MutS, clamp [Cynara cardu... 186 1e-52
XP_008345359.1 PREDICTED: DNA mismatch repair protein MSH4-like ... 173 5e-51
XP_017235754.1 PREDICTED: DNA mismatch repair protein MSH4 isofo... 177 4e-50
XP_017235753.1 PREDICTED: DNA mismatch repair protein MSH4 isofo... 177 6e-50
CBI37367.3 unnamed protein product, partial [Vitis vinifera] 169 7e-50
KZN06003.1 hypothetical protein DCAR_006840 [Daucus carota subsp... 177 1e-49
XP_017235752.1 PREDICTED: DNA mismatch repair protein MSH4 isofo... 177 1e-49
KDO61394.1 hypothetical protein CISIN_1g0068591mg, partial [Citr... 168 2e-49
XP_017235751.1 PREDICTED: DNA mismatch repair protein MSH4 isofo... 177 2e-49
XP_018819253.1 PREDICTED: DNA mismatch repair protein MSH4 [Jugl... 177 3e-49
JAU05646.1 DNA mismatch repair protein MSH4, partial [Noccaea ca... 164 3e-49
XP_016557348.1 PREDICTED: DNA mismatch repair protein MSH4-like ... 166 3e-49
CDP09986.1 unnamed protein product [Coffea canephora] 176 5e-49
OAY60056.1 hypothetical protein MANES_01G082400 [Manihot esculenta] 174 1e-48
OAY60055.1 hypothetical protein MANES_01G082400 [Manihot esculenta] 174 2e-48
KDP39890.1 hypothetical protein JCGZ_03421 [Jatropha curcas] 172 3e-48
XP_019073746.1 PREDICTED: DNA mismatch repair protein MSH4 [Viti... 169 4e-48
GAV72825.1 MutS_V domain-containing protein/MutS_IV domain-conta... 173 4e-48
XP_009334540.1 PREDICTED: DNA mismatch repair protein MSH4-like ... 173 5e-48
>XP_008340723.1 PREDICTED: DNA mismatch repair protein MSH4-like [Malus domestica]
Length = 143
Score = 173 bits (439), Expect = 2e-53
Identities = 86/114 (75%), Positives = 95/114 (83%)
Frame = -3
Query: 344 KDVETIKARLDCLDELMSNEQLFFGLSQALRKFPKESDRVLCHFCFKQKKVTNEVFGIDN 165
KD+ETI ARLDCLDELMSNEQLFFGL+Q LRKFPKESDRVLCHFCFK KK+TN+V G+D
Sbjct: 23 KDIETINARLDCLDELMSNEQLFFGLAQVLRKFPKESDRVLCHFCFKPKKITNKVVGVDC 82
Query: 164 ARKSQVLISNIIXXXXXXXXXXXLSKVLKDAKSFLLGNVYNSICENEKYASIRK 3
ARKSQVL+S+II LSKVLKDAK FLL NVY S+CENEKYA+IRK
Sbjct: 83 ARKSQVLVSSIILLKTALDALPLLSKVLKDAKCFLLANVYQSVCENEKYAAIRK 136
>KVH95538.1 DNA mismatch repair protein MutS, clamp [Cynara cardunculus var.
scolymus]
Length = 868
Score = 186 bits (473), Expect = 1e-52
Identities = 94/114 (82%), Positives = 99/114 (86%)
Frame = -3
Query: 344 KDVETIKARLDCLDELMSNEQLFFGLSQALRKFPKESDRVLCHFCFKQKKVTNEVFGIDN 165
KD+ETIKARLDCLDELMSNEQLFFGLSQALRKFPKE+DRVLCHFCFK KKVTNEV GIDN
Sbjct: 232 KDIETIKARLDCLDELMSNEQLFFGLSQALRKFPKETDRVLCHFCFKPKKVTNEVLGIDN 291
Query: 164 ARKSQVLISNIIXXXXXXXXXXXLSKVLKDAKSFLLGNVYNSICENEKYASIRK 3
ARKSQVLIS+II LSKVLKDA SFLLGN+Y S+CENEKYASIRK
Sbjct: 292 ARKSQVLISSIIVLKTALDALPFLSKVLKDANSFLLGNIYKSVCENEKYASIRK 345
>XP_008345359.1 PREDICTED: DNA mismatch repair protein MSH4-like [Malus domestica]
Length = 340
Score = 173 bits (439), Expect = 5e-51
Identities = 86/114 (75%), Positives = 95/114 (83%)
Frame = -3
Query: 344 KDVETIKARLDCLDELMSNEQLFFGLSQALRKFPKESDRVLCHFCFKQKKVTNEVFGIDN 165
KD+ETI ARLDCLDELMSNEQLFFGL+Q LRKFPKESDRVLCHFCFK KK+TN+V G+D
Sbjct: 220 KDIETINARLDCLDELMSNEQLFFGLAQVLRKFPKESDRVLCHFCFKPKKITNKVVGVDC 279
Query: 164 ARKSQVLISNIIXXXXXXXXXXXLSKVLKDAKSFLLGNVYNSICENEKYASIRK 3
ARKSQVL+S+II LSKVLKDAK FLL NVY S+CENEKYA+IRK
Sbjct: 280 ARKSQVLVSSIILLKTALDALPLLSKVLKDAKCFLLANVYQSVCENEKYAAIRK 333
>XP_017235754.1 PREDICTED: DNA mismatch repair protein MSH4 isoform X4 [Daucus
carota subsp. sativus]
Length = 638
Score = 177 bits (449), Expect = 4e-50
Identities = 91/114 (79%), Positives = 96/114 (84%)
Frame = -3
Query: 344 KDVETIKARLDCLDELMSNEQLFFGLSQALRKFPKESDRVLCHFCFKQKKVTNEVFGIDN 165
KDV TIKARLDCLDELM+NEQLFFGLSQALRKFPKE+DRVLCHFCFK KKVT EV GIDN
Sbjct: 66 KDVGTIKARLDCLDELMTNEQLFFGLSQALRKFPKETDRVLCHFCFKPKKVTREVLGIDN 125
Query: 164 ARKSQVLISNIIXXXXXXXXXXXLSKVLKDAKSFLLGNVYNSICENEKYASIRK 3
AR SQVLIS+II LS VLKDAKS LLGNVYNS+CENEKYASI+K
Sbjct: 126 ARSSQVLISSIILLKTALDALPLLSTVLKDAKSVLLGNVYNSVCENEKYASIKK 179
>XP_017235753.1 PREDICTED: DNA mismatch repair protein MSH4 isoform X3 [Daucus
carota subsp. sativus]
Length = 659
Score = 177 bits (449), Expect = 6e-50
Identities = 91/114 (79%), Positives = 96/114 (84%)
Frame = -3
Query: 344 KDVETIKARLDCLDELMSNEQLFFGLSQALRKFPKESDRVLCHFCFKQKKVTNEVFGIDN 165
KDV TIKARLDCLDELM+NEQLFFGLSQALRKFPKE+DRVLCHFCFK KKVT EV GIDN
Sbjct: 220 KDVGTIKARLDCLDELMTNEQLFFGLSQALRKFPKETDRVLCHFCFKPKKVTREVLGIDN 279
Query: 164 ARKSQVLISNIIXXXXXXXXXXXLSKVLKDAKSFLLGNVYNSICENEKYASIRK 3
AR SQVLIS+II LS VLKDAKS LLGNVYNS+CENEKYASI+K
Sbjct: 280 ARSSQVLISSIILLKTALDALPLLSTVLKDAKSVLLGNVYNSVCENEKYASIKK 333
>CBI37367.3 unnamed protein product, partial [Vitis vinifera]
Length = 280
Score = 169 bits (427), Expect = 7e-50
Identities = 85/114 (74%), Positives = 93/114 (81%)
Frame = -3
Query: 344 KDVETIKARLDCLDELMSNEQLFFGLSQALRKFPKESDRVLCHFCFKQKKVTNEVFGIDN 165
KD+ETI ARLDCLDELMSNEQLFFGLSQ LRKFPKE+DRVLCHFCFK KKVT EV G++
Sbjct: 56 KDIETINARLDCLDELMSNEQLFFGLSQVLRKFPKETDRVLCHFCFKPKKVTKEVLGVEY 115
Query: 164 ARKSQVLISNIIXXXXXXXXXXXLSKVLKDAKSFLLGNVYNSICENEKYASIRK 3
ARK+Q+LIS+II LSKVLKDAKSFLL NVY S+C NE YASIRK
Sbjct: 116 ARKNQMLISSIILLKTALDALPLLSKVLKDAKSFLLANVYKSVCANETYASIRK 169
>KZN06003.1 hypothetical protein DCAR_006840 [Daucus carota subsp. sativus]
Length = 734
Score = 177 bits (449), Expect = 1e-49
Identities = 91/114 (79%), Positives = 96/114 (84%)
Frame = -3
Query: 344 KDVETIKARLDCLDELMSNEQLFFGLSQALRKFPKESDRVLCHFCFKQKKVTNEVFGIDN 165
KDV TIKARLDCLDELM+NEQLFFGLSQALRKFPKE+DRVLCHFCFK KKVT EV GIDN
Sbjct: 161 KDVGTIKARLDCLDELMTNEQLFFGLSQALRKFPKETDRVLCHFCFKPKKVTREVLGIDN 220
Query: 164 ARKSQVLISNIIXXXXXXXXXXXLSKVLKDAKSFLLGNVYNSICENEKYASIRK 3
AR SQVLIS+II LS VLKDAKS LLGNVYNS+CENEKYASI+K
Sbjct: 221 ARSSQVLISSIILLKTALDALPLLSTVLKDAKSVLLGNVYNSVCENEKYASIKK 274
>XP_017235752.1 PREDICTED: DNA mismatch repair protein MSH4 isoform X2 [Daucus
carota subsp. sativus]
Length = 756
Score = 177 bits (449), Expect = 1e-49
Identities = 91/114 (79%), Positives = 96/114 (84%)
Frame = -3
Query: 344 KDVETIKARLDCLDELMSNEQLFFGLSQALRKFPKESDRVLCHFCFKQKKVTNEVFGIDN 165
KDV TIKARLDCLDELM+NEQLFFGLSQALRKFPKE+DRVLCHFCFK KKVT EV GIDN
Sbjct: 184 KDVGTIKARLDCLDELMTNEQLFFGLSQALRKFPKETDRVLCHFCFKPKKVTREVLGIDN 243
Query: 164 ARKSQVLISNIIXXXXXXXXXXXLSKVLKDAKSFLLGNVYNSICENEKYASIRK 3
AR SQVLIS+II LS VLKDAKS LLGNVYNS+CENEKYASI+K
Sbjct: 244 ARSSQVLISSIILLKTALDALPLLSTVLKDAKSVLLGNVYNSVCENEKYASIKK 297
>KDO61394.1 hypothetical protein CISIN_1g0068591mg, partial [Citrus sinensis]
Length = 301
Score = 168 bits (426), Expect = 2e-49
Identities = 83/114 (72%), Positives = 94/114 (82%)
Frame = -3
Query: 344 KDVETIKARLDCLDELMSNEQLFFGLSQALRKFPKESDRVLCHFCFKQKKVTNEVFGIDN 165
KD+ETI RLDCLDELMSNEQLFFGLSQ LRKFPKE+DRVLCHFCFK KKVT++V +DN
Sbjct: 56 KDIETINTRLDCLDELMSNEQLFFGLSQFLRKFPKETDRVLCHFCFKPKKVTSKVLDVDN 115
Query: 164 ARKSQVLISNIIXXXXXXXXXXXLSKVLKDAKSFLLGNVYNSICENEKYASIRK 3
A+KSQ LIS+II L+KVLKDA+SFLL N+Y S+CENEKYASIRK
Sbjct: 116 AKKSQTLISSIILLKTALDALPLLAKVLKDAQSFLLANIYRSVCENEKYASIRK 169
>XP_017235751.1 PREDICTED: DNA mismatch repair protein MSH4 isoform X1 [Daucus
carota subsp. sativus]
Length = 792
Score = 177 bits (449), Expect = 2e-49
Identities = 91/114 (79%), Positives = 96/114 (84%)
Frame = -3
Query: 344 KDVETIKARLDCLDELMSNEQLFFGLSQALRKFPKESDRVLCHFCFKQKKVTNEVFGIDN 165
KDV TIKARLDCLDELM+NEQLFFGLSQALRKFPKE+DRVLCHFCFK KKVT EV GIDN
Sbjct: 220 KDVGTIKARLDCLDELMTNEQLFFGLSQALRKFPKETDRVLCHFCFKPKKVTREVLGIDN 279
Query: 164 ARKSQVLISNIIXXXXXXXXXXXLSKVLKDAKSFLLGNVYNSICENEKYASIRK 3
AR SQVLIS+II LS VLKDAKS LLGNVYNS+CENEKYASI+K
Sbjct: 280 ARSSQVLISSIILLKTALDALPLLSTVLKDAKSVLLGNVYNSVCENEKYASIKK 333
>XP_018819253.1 PREDICTED: DNA mismatch repair protein MSH4 [Juglans regia]
XP_018819254.1 PREDICTED: DNA mismatch repair protein
MSH4 [Juglans regia]
Length = 792
Score = 177 bits (448), Expect = 3e-49
Identities = 88/114 (77%), Positives = 96/114 (84%)
Frame = -3
Query: 344 KDVETIKARLDCLDELMSNEQLFFGLSQALRKFPKESDRVLCHFCFKQKKVTNEVFGIDN 165
KD+ETI ARLDCLDELMSNEQLFFGLSQ LRKFPKE+DRVLCHFCFK KK+TNEV GID
Sbjct: 220 KDIETINARLDCLDELMSNEQLFFGLSQVLRKFPKETDRVLCHFCFKPKKITNEVLGIDY 279
Query: 164 ARKSQVLISNIIXXXXXXXXXXXLSKVLKDAKSFLLGNVYNSICENEKYASIRK 3
ARKSQ+LIS+II LSKVLKDAKSFLL N+Y S+CENEKYASI+K
Sbjct: 280 ARKSQMLISSIILLKTALDALPLLSKVLKDAKSFLLANIYKSVCENEKYASIKK 333
>JAU05646.1 DNA mismatch repair protein MSH4, partial [Noccaea caerulescens]
Length = 178
Score = 164 bits (414), Expect = 3e-49
Identities = 81/114 (71%), Positives = 90/114 (78%)
Frame = -3
Query: 344 KDVETIKARLDCLDELMSNEQLFFGLSQALRKFPKESDRVLCHFCFKQKKVTNEVFGIDN 165
KD+ETI RLDCLDELMSNEQLFFGLSQ LRKFPKE+DRVLCHFCFK KKVT V G DN
Sbjct: 56 KDIETINTRLDCLDELMSNEQLFFGLSQVLRKFPKETDRVLCHFCFKPKKVTEAVLGFDN 115
Query: 164 ARKSQVLISNIIXXXXXXXXXXXLSKVLKDAKSFLLGNVYNSICENEKYASIRK 3
R+SQ +IS+II L+KVLKDAK FLL NVY S+CEN++YASIRK
Sbjct: 116 TRRSQNMISSIILLKTALDALPLLAKVLKDAKCFLLANVYKSVCENDRYASIRK 169
>XP_016557348.1 PREDICTED: DNA mismatch repair protein MSH4-like [Capsicum annuum]
Length = 265
Score = 166 bits (421), Expect = 3e-49
Identities = 83/114 (72%), Positives = 93/114 (81%)
Frame = -3
Query: 344 KDVETIKARLDCLDELMSNEQLFFGLSQALRKFPKESDRVLCHFCFKQKKVTNEVFGIDN 165
KD+ETI RLDCLDELMSNEQLFFGLS+ALRKFPKE+DRVLCHFCFK KKVTNEV DN
Sbjct: 83 KDIETINTRLDCLDELMSNEQLFFGLSEALRKFPKETDRVLCHFCFKPKKVTNEVLASDN 142
Query: 164 ARKSQVLISNIIXXXXXXXXXXXLSKVLKDAKSFLLGNVYNSICENEKYASIRK 3
R+SQ++IS+II LSKVLK+AKS LLGNVY +ICENE YASIR+
Sbjct: 143 GRRSQIMISSIILLKTALDALPLLSKVLKEAKSCLLGNVYKTICENETYASIRE 196
>CDP09986.1 unnamed protein product [Coffea canephora]
Length = 795
Score = 176 bits (446), Expect = 5e-49
Identities = 89/114 (78%), Positives = 95/114 (83%)
Frame = -3
Query: 344 KDVETIKARLDCLDELMSNEQLFFGLSQALRKFPKESDRVLCHFCFKQKKVTNEVFGIDN 165
KD+ETI ARLDCLDELMSNEQLFFGLSQALRKFPKE+DRVLCHFCFK KKVTN V IDN
Sbjct: 222 KDIETINARLDCLDELMSNEQLFFGLSQALRKFPKETDRVLCHFCFKPKKVTNGVLAIDN 281
Query: 164 ARKSQVLISNIIXXXXXXXXXXXLSKVLKDAKSFLLGNVYNSICENEKYASIRK 3
ARKSQ+LIS+II LSKVLKDAK FLL N+Y S+CENEKYASIRK
Sbjct: 282 ARKSQILISSIILLKTALDALPLLSKVLKDAKCFLLTNIYKSVCENEKYASIRK 335
>OAY60056.1 hypothetical protein MANES_01G082400 [Manihot esculenta]
Length = 680
Score = 174 bits (441), Expect = 1e-48
Identities = 86/114 (75%), Positives = 95/114 (83%)
Frame = -3
Query: 344 KDVETIKARLDCLDELMSNEQLFFGLSQALRKFPKESDRVLCHFCFKQKKVTNEVFGIDN 165
KDVETI RLDCLDELMSNEQLFFGLSQ LRKFPK++DR+LCHFCFK KKVTNEV G DN
Sbjct: 108 KDVETINTRLDCLDELMSNEQLFFGLSQVLRKFPKDTDRILCHFCFKPKKVTNEVLGTDN 167
Query: 164 ARKSQVLISNIIXXXXXXXXXXXLSKVLKDAKSFLLGNVYNSICENEKYASIRK 3
AR+S+VLIS+II LSKVLKDAKSFLL N+Y ++CENEKYASIRK
Sbjct: 168 ARRSRVLISSIILLKTALEALPLLSKVLKDAKSFLLANIYKTVCENEKYASIRK 221
>OAY60055.1 hypothetical protein MANES_01G082400 [Manihot esculenta]
Length = 792
Score = 174 bits (441), Expect = 2e-48
Identities = 86/114 (75%), Positives = 95/114 (83%)
Frame = -3
Query: 344 KDVETIKARLDCLDELMSNEQLFFGLSQALRKFPKESDRVLCHFCFKQKKVTNEVFGIDN 165
KDVETI RLDCLDELMSNEQLFFGLSQ LRKFPK++DR+LCHFCFK KKVTNEV G DN
Sbjct: 220 KDVETINTRLDCLDELMSNEQLFFGLSQVLRKFPKDTDRILCHFCFKPKKVTNEVLGTDN 279
Query: 164 ARKSQVLISNIIXXXXXXXXXXXLSKVLKDAKSFLLGNVYNSICENEKYASIRK 3
AR+S+VLIS+II LSKVLKDAKSFLL N+Y ++CENEKYASIRK
Sbjct: 280 ARRSRVLISSIILLKTALEALPLLSKVLKDAKSFLLANIYKTVCENEKYASIRK 333
>KDP39890.1 hypothetical protein JCGZ_03421 [Jatropha curcas]
Length = 644
Score = 172 bits (437), Expect = 3e-48
Identities = 87/113 (76%), Positives = 94/113 (83%)
Frame = -3
Query: 344 KDVETIKARLDCLDELMSNEQLFFGLSQALRKFPKESDRVLCHFCFKQKKVTNEVFGIDN 165
KD+ETI RLDCLDELMSNEQLFFGLSQ L KFPKE+DRVLCHFCFK KKVTNEV GIDN
Sbjct: 72 KDIETINTRLDCLDELMSNEQLFFGLSQVLCKFPKETDRVLCHFCFKPKKVTNEVLGIDN 131
Query: 164 ARKSQVLISNIIXXXXXXXXXXXLSKVLKDAKSFLLGNVYNSICENEKYASIR 6
AR+SQVLIS+II LSKVLKDAKSFLL NVY ++CEN+KYASIR
Sbjct: 132 ARRSQVLISSIILLKTALDALPLLSKVLKDAKSFLLANVYRTVCENKKYASIR 184
>XP_019073746.1 PREDICTED: DNA mismatch repair protein MSH4 [Vitis vinifera]
Length = 452
Score = 169 bits (427), Expect = 4e-48
Identities = 85/114 (74%), Positives = 93/114 (81%)
Frame = -3
Query: 344 KDVETIKARLDCLDELMSNEQLFFGLSQALRKFPKESDRVLCHFCFKQKKVTNEVFGIDN 165
KD+ETI ARLDCLDELMSNEQLFFGLSQ LRKFPKE+DRVLCHFCFK KKVT EV G++
Sbjct: 222 KDIETINARLDCLDELMSNEQLFFGLSQVLRKFPKETDRVLCHFCFKPKKVTKEVLGVEY 281
Query: 164 ARKSQVLISNIIXXXXXXXXXXXLSKVLKDAKSFLLGNVYNSICENEKYASIRK 3
ARK+Q+LIS+II LSKVLKDAKSFLL NVY S+C NE YASIRK
Sbjct: 282 ARKNQMLISSIILLKTALDALPLLSKVLKDAKSFLLANVYKSVCANETYASIRK 335
>GAV72825.1 MutS_V domain-containing protein/MutS_IV domain-containing
protein/MutS_III domain-containing protein, partial
[Cephalotus follicularis]
Length = 786
Score = 173 bits (439), Expect = 4e-48
Identities = 84/114 (73%), Positives = 96/114 (84%)
Frame = -3
Query: 344 KDVETIKARLDCLDELMSNEQLFFGLSQALRKFPKESDRVLCHFCFKQKKVTNEVFGIDN 165
KD+ETI RLDCLDELMSNE+LFFG+SQ LRKFPKE+DRVLCHFCFK KKVTNEV G++N
Sbjct: 214 KDIETINTRLDCLDELMSNEELFFGISQVLRKFPKETDRVLCHFCFKPKKVTNEVLGVNN 273
Query: 164 ARKSQVLISNIIXXXXXXXXXXXLSKVLKDAKSFLLGNVYNSICENEKYASIRK 3
ARKSQ+LI+++I LSKVLKDAKSFLL NVY S+CENEKY+SIRK
Sbjct: 274 ARKSQLLIASVILLKTALDALPLLSKVLKDAKSFLLANVYKSVCENEKYSSIRK 327
>XP_009334540.1 PREDICTED: DNA mismatch repair protein MSH4-like [Pyrus x
bretschneideri]
Length = 792
Score = 173 bits (439), Expect = 5e-48
Identities = 86/114 (75%), Positives = 95/114 (83%)
Frame = -3
Query: 344 KDVETIKARLDCLDELMSNEQLFFGLSQALRKFPKESDRVLCHFCFKQKKVTNEVFGIDN 165
KD+ETI ARLDCLDELMSNEQLFFGL+Q LRKFPKESDRVLCHFCFK KK+TN+V G+D
Sbjct: 220 KDIETINARLDCLDELMSNEQLFFGLAQVLRKFPKESDRVLCHFCFKPKKITNKVVGVDC 279
Query: 164 ARKSQVLISNIIXXXXXXXXXXXLSKVLKDAKSFLLGNVYNSICENEKYASIRK 3
ARKSQVL+S+II LSKVLKDAK FLL NVY S+CENEKYA+IRK
Sbjct: 280 ARKSQVLVSSIILLKTALDALPLLSKVLKDAKCFLLANVYQSVCENEKYAAIRK 333