BLASTX nr result

ID: Panax24_contig00029664 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00029664
         (356 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_019194963.1 PREDICTED: snRNA-activating protein complex subun...    55   1e-06
KZV27587.1 SnRNA activating complex family protein isoform 4 [Do...    54   7e-06
XP_012841923.1 PREDICTED: snRNA-activating protein complex subun...    53   1e-05

>XP_019194963.1 PREDICTED: snRNA-activating protein complex subunit isoform X1
           [Ipomoea nil]
          Length = 472

 Score = 55.5 bits (132), Expect = 1e-06
 Identities = 27/47 (57%), Positives = 32/47 (68%)
 Frame = +1

Query: 214 MPPESRAADDGGVDQNVSVPRGGPIYVPDMVVSLTKVFDFELSLVRE 354
           M   S   D GG D N S+PRGGPIYVPDMV +LT++ DFE S+  E
Sbjct: 1   MATASMDFDVGGDDPNASIPRGGPIYVPDMVSALTRIPDFESSVFHE 47


>KZV27587.1 SnRNA activating complex family protein isoform 4 [Dorcoceras
           hygrometricum]
          Length = 483

 Score = 53.5 bits (127), Expect = 7e-06
 Identities = 23/39 (58%), Positives = 30/39 (76%)
 Frame = +1

Query: 238 DDGGVDQNVSVPRGGPIYVPDMVVSLTKVFDFELSLVRE 354
           DDGG D NVS+PRGGPIYVP+M+  +T +  F+ S+V E
Sbjct: 6   DDGGEDLNVSIPRGGPIYVPNMISPITNIPGFQASVVSE 44


>XP_012841923.1 PREDICTED: snRNA-activating protein complex subunit [Erythranthe
           guttata] XP_012841924.1 PREDICTED: snRNA-activating
           protein complex subunit [Erythranthe guttata]
          Length = 475

 Score = 53.1 bits (126), Expect = 1e-05
 Identities = 26/47 (55%), Positives = 32/47 (68%)
 Frame = +1

Query: 214 MPPESRAADDGGVDQNVSVPRGGPIYVPDMVVSLTKVFDFELSLVRE 354
           MP      +DGG + NVS+P GGPIYVPD V  LT+V DFE S+ +E
Sbjct: 1   MPTMLPGHEDGGEELNVSIPLGGPIYVPDSVGPLTRVPDFETSVFQE 47


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