BLASTX nr result

ID: Panax24_contig00029589 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00029589
         (623 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

OAO96707.1 hypothetical protein AXX17_AT4G16140 [Arabidopsis tha...    57   6e-06
NP_567421.1 F-box/RNI-like superfamily protein [Arabidopsis thal...    57   6e-06
CAB10188.1 hypothetical protein [Arabidopsis thaliana] CAB78451....    57   7e-06

>OAO96707.1 hypothetical protein AXX17_AT4G16140 [Arabidopsis thaliana]
          Length = 468

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 25/58 (43%), Positives = 39/58 (67%)
 Frame = +2

Query: 335 ESLCLPHKSLKALTTSLDVFPMFSNLTHLTLGLSKDLGWKFLPNLLTQMPKLKTLVIE 508
           ++L L   +L+ LT S D  P+F+NLTHLT+  + ++GW+ LP LL   P L+TL+ +
Sbjct: 291 KTLYLSSNTLQVLTYSCDAIPIFNNLTHLTIESNPEVGWQSLPGLLKNSPNLETLIFQ 348


>NP_567421.1 F-box/RNI-like superfamily protein [Arabidopsis thaliana]
           NP_001319929.1 F-box/RNI-like superfamily protein
           [Arabidopsis thaliana] Q94B46.1 RecName:
           Full=F-box/LRR-repeat protein At4g14096 AAK68800.1
           Unknown protein [Arabidopsis thaliana] AAM91134.1
           unknown protein [Arabidopsis thaliana] AEE83371.1
           F-box/RNI-like superfamily protein [Arabidopsis
           thaliana] ANM67110.1 F-box/RNI-like superfamily protein
           [Arabidopsis thaliana]
          Length = 468

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 25/58 (43%), Positives = 39/58 (67%)
 Frame = +2

Query: 335 ESLCLPHKSLKALTTSLDVFPMFSNLTHLTLGLSKDLGWKFLPNLLTQMPKLKTLVIE 508
           ++L L   +L+ LT S D  P+F+NLTHLT+  + ++GW+ LP LL   P L+TL+ +
Sbjct: 291 KTLYLSSNTLQVLTYSCDAIPIFNNLTHLTIESNPEVGWQSLPGLLKNSPNLETLIFQ 348


>CAB10188.1 hypothetical protein [Arabidopsis thaliana] CAB78451.1 hypothetical
           protein [Arabidopsis thaliana]
          Length = 1047

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 25/58 (43%), Positives = 39/58 (67%)
 Frame = +2

Query: 335 ESLCLPHKSLKALTTSLDVFPMFSNLTHLTLGLSKDLGWKFLPNLLTQMPKLKTLVIE 508
           ++L L   +L+ LT S D  P+F+NLTHLT+  + ++GW+ LP LL   P L+TL+ +
Sbjct: 529 KTLYLSSNTLQVLTYSCDAIPIFNNLTHLTIESNPEVGWQSLPGLLKNSPNLETLIFQ 586



 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 26/64 (40%), Positives = 42/64 (65%)
 Frame = +2

Query: 335  ESLCLPHKSLKALTTSLDVFPMFSNLTHLTLGLSKDLGWKFLPNLLTQMPKLKTLVIEVS 514
            ++L L   +L+ LT S D  P+F+NLTHLT+  +  +GW+ +P LL   P L+TL+ +V 
Sbjct: 949  KTLYLSANTLQVLTYSCDAIPIFNNLTHLTIESNPRVGWQSVPGLLKNSPNLETLIFQVR 1008

Query: 515  SEGL 526
            ++ L
Sbjct: 1009 NKPL 1012


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