BLASTX nr result

ID: Panax24_contig00029583 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00029583
         (616 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017235064.1 PREDICTED: putative E3 ubiquitin-protein ligase X...    58   2e-06
ACE86389.1 putative RING zinc finger ankyrin protein, partial [S...    56   5e-06
XP_010685779.1 PREDICTED: putative E3 ubiquitin-protein ligase X...    56   1e-05

>XP_017235064.1 PREDICTED: putative E3 ubiquitin-protein ligase XBAT31 [Daucus
           carota subsp. sativus] KZN04485.1 hypothetical protein
           DCAR_005322 [Daucus carota subsp. sativus]
          Length = 445

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 23/32 (71%), Positives = 28/32 (87%)
 Frame = +2

Query: 521 IHCENMLMQTSDAELCCICFDQVCTIEVQDCG 616
           +  ++ + +TSDAELCCICFDQVCTIEVQDCG
Sbjct: 308 VEIDDNMSETSDAELCCICFDQVCTIEVQDCG 339


>ACE86389.1 putative RING zinc finger ankyrin protein, partial [Sorghum
           bicolor]
          Length = 292

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 23/29 (79%), Positives = 24/29 (82%)
 Frame = +2

Query: 530 ENMLMQTSDAELCCICFDQVCTIEVQDCG 616
           E   +QTSD ELCCICFDQ CTIEVQDCG
Sbjct: 144 EPFTLQTSDTELCCICFDQACTIEVQDCG 172


>XP_010685779.1 PREDICTED: putative E3 ubiquitin-protein ligase XBAT31 [Beta
           vulgaris subsp. vulgaris] KMT05262.1 hypothetical
           protein BVRB_7g174010 [Beta vulgaris subsp. vulgaris]
          Length = 441

 Score = 55.8 bits (133), Expect = 1e-05
 Identities = 23/34 (67%), Positives = 27/34 (79%)
 Frame = +2

Query: 515 NGIHCENMLMQTSDAELCCICFDQVCTIEVQDCG 616
           +G   ++ L + SD ELCCICFDQVCTIEVQDCG
Sbjct: 307 DGGEIDDSLSEASDTELCCICFDQVCTIEVQDCG 340


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