BLASTX nr result

ID: Panax24_contig00029512 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00029512
         (570 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_016513876.1 PREDICTED: E3 ubiquitin protein ligase DRIP2-like...    79   7e-14
XP_017252477.1 PREDICTED: E3 ubiquitin protein ligase DRIP2-like...    59   4e-07
KZM95213.1 hypothetical protein DCAR_018455 [Daucus carota subsp...    59   4e-07
CDP03700.1 unnamed protein product [Coffea canephora]                  56   5e-06

>XP_016513876.1 PREDICTED: E3 ubiquitin protein ligase DRIP2-like isoform X2
           [Nicotiana tabacum]
          Length = 359

 Score = 78.6 bits (192), Expect = 7e-14
 Identities = 62/140 (44%), Positives = 71/140 (50%), Gaps = 23/140 (16%)
 Frame = -3

Query: 568 PRVSAQSALTGRRSKVSANKTLRGSSFFIEKQIXXXXXXXXXXXXXXSR--ETLTKCTQT 395
           PRVS Q+  TGRRSK  A K LRGS+F +EK I              S   ETLTK TQ 
Sbjct: 120 PRVSTQTGTTGRRSKSVARKALRGSTFSVEKPIKKEEKISGEDQLDSSSSPETLTKFTQN 179

Query: 394 IRQGSASKSQS*RDEKDS-TDLGPPE-SVKPKKLRILRQKKAAAF--------------- 266
           IRQ S+S   S +   D+ T+ G  +   KPKKLR  RQKKA+ F               
Sbjct: 180 IRQNSSSAELSGQPTPDNETENGTDQWEDKPKKLRRNRQKKASEFGESSISPQTVLDAIT 239

Query: 265 ----RELNQIWCSLVASEDQ 218
               R  N IW SLVASEDQ
Sbjct: 240 AKCERRNNPIWFSLVASEDQ 259


>XP_017252477.1 PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Daucus carota
           subsp. sativus]
          Length = 416

 Score = 59.3 bits (142), Expect = 4e-07
 Identities = 32/69 (46%), Positives = 44/69 (63%)
 Frame = -3

Query: 568 PRVSAQSALTGRRSKVSANKTLRGSSFFIEKQIXXXXXXXXXXXXXXSRETLTKCTQTIR 389
           P+VS ++ALTG+RSK +A K+LRGSSF ++K +              SRETLTK +QTIR
Sbjct: 116 PKVSPKTALTGKRSKATARKSLRGSSFSVQKHVKKEEDYESDSESFNSRETLTKFSQTIR 175

Query: 388 QGSASKSQS 362
           Q  ++   S
Sbjct: 176 QNFSNGEPS 184


>KZM95213.1 hypothetical protein DCAR_018455 [Daucus carota subsp. sativus]
          Length = 435

 Score = 59.3 bits (142), Expect = 4e-07
 Identities = 32/69 (46%), Positives = 44/69 (63%)
 Frame = -3

Query: 568 PRVSAQSALTGRRSKVSANKTLRGSSFFIEKQIXXXXXXXXXXXXXXSRETLTKCTQTIR 389
           P+VS ++ALTG+RSK +A K+LRGSSF ++K +              SRETLTK +QTIR
Sbjct: 135 PKVSPKTALTGKRSKATARKSLRGSSFSVQKHVKKEEDYESDSESFNSRETLTKFSQTIR 194

Query: 388 QGSASKSQS 362
           Q  ++   S
Sbjct: 195 QNFSNGEPS 203


>CDP03700.1 unnamed protein product [Coffea canephora]
          Length = 428

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 36/70 (51%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
 Frame = -3

Query: 568 PRVSAQSALTGRRSKVSANKTLRGSSFFIEKQIXXXXXXXXXXXXXXSR-ETLTKCTQTI 392
           PRVSAQS +TGRRSK  A K+LRGSSF IEK +              S  ETL K TQ I
Sbjct: 120 PRVSAQSGMTGRRSKSIARKSLRGSSFSIEKPVKKEEDSGEDRPESSSSPETLNKFTQNI 179

Query: 391 RQGSASKSQS 362
           RQ S++   S
Sbjct: 180 RQNSSNGDPS 189


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