BLASTX nr result
ID: Panax24_contig00029512
seq
BLASTX 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax24_contig00029512 (570 letters) Database: ./nr 115,041,592 sequences; 42,171,959,267 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value XP_016513876.1 PREDICTED: E3 ubiquitin protein ligase DRIP2-like... 79 7e-14 XP_017252477.1 PREDICTED: E3 ubiquitin protein ligase DRIP2-like... 59 4e-07 KZM95213.1 hypothetical protein DCAR_018455 [Daucus carota subsp... 59 4e-07 CDP03700.1 unnamed protein product [Coffea canephora] 56 5e-06 >XP_016513876.1 PREDICTED: E3 ubiquitin protein ligase DRIP2-like isoform X2 [Nicotiana tabacum] Length = 359 Score = 78.6 bits (192), Expect = 7e-14 Identities = 62/140 (44%), Positives = 71/140 (50%), Gaps = 23/140 (16%) Frame = -3 Query: 568 PRVSAQSALTGRRSKVSANKTLRGSSFFIEKQIXXXXXXXXXXXXXXSR--ETLTKCTQT 395 PRVS Q+ TGRRSK A K LRGS+F +EK I S ETLTK TQ Sbjct: 120 PRVSTQTGTTGRRSKSVARKALRGSTFSVEKPIKKEEKISGEDQLDSSSSPETLTKFTQN 179 Query: 394 IRQGSASKSQS*RDEKDS-TDLGPPE-SVKPKKLRILRQKKAAAF--------------- 266 IRQ S+S S + D+ T+ G + KPKKLR RQKKA+ F Sbjct: 180 IRQNSSSAELSGQPTPDNETENGTDQWEDKPKKLRRNRQKKASEFGESSISPQTVLDAIT 239 Query: 265 ----RELNQIWCSLVASEDQ 218 R N IW SLVASEDQ Sbjct: 240 AKCERRNNPIWFSLVASEDQ 259 >XP_017252477.1 PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Daucus carota subsp. sativus] Length = 416 Score = 59.3 bits (142), Expect = 4e-07 Identities = 32/69 (46%), Positives = 44/69 (63%) Frame = -3 Query: 568 PRVSAQSALTGRRSKVSANKTLRGSSFFIEKQIXXXXXXXXXXXXXXSRETLTKCTQTIR 389 P+VS ++ALTG+RSK +A K+LRGSSF ++K + SRETLTK +QTIR Sbjct: 116 PKVSPKTALTGKRSKATARKSLRGSSFSVQKHVKKEEDYESDSESFNSRETLTKFSQTIR 175 Query: 388 QGSASKSQS 362 Q ++ S Sbjct: 176 QNFSNGEPS 184 >KZM95213.1 hypothetical protein DCAR_018455 [Daucus carota subsp. sativus] Length = 435 Score = 59.3 bits (142), Expect = 4e-07 Identities = 32/69 (46%), Positives = 44/69 (63%) Frame = -3 Query: 568 PRVSAQSALTGRRSKVSANKTLRGSSFFIEKQIXXXXXXXXXXXXXXSRETLTKCTQTIR 389 P+VS ++ALTG+RSK +A K+LRGSSF ++K + SRETLTK +QTIR Sbjct: 135 PKVSPKTALTGKRSKATARKSLRGSSFSVQKHVKKEEDYESDSESFNSRETLTKFSQTIR 194 Query: 388 QGSASKSQS 362 Q ++ S Sbjct: 195 QNFSNGEPS 203 >CDP03700.1 unnamed protein product [Coffea canephora] Length = 428 Score = 56.2 bits (134), Expect = 5e-06 Identities = 36/70 (51%), Positives = 41/70 (58%), Gaps = 1/70 (1%) Frame = -3 Query: 568 PRVSAQSALTGRRSKVSANKTLRGSSFFIEKQIXXXXXXXXXXXXXXSR-ETLTKCTQTI 392 PRVSAQS +TGRRSK A K+LRGSSF IEK + S ETL K TQ I Sbjct: 120 PRVSAQSGMTGRRSKSIARKSLRGSSFSIEKPVKKEEDSGEDRPESSSSPETLNKFTQNI 179 Query: 391 RQGSASKSQS 362 RQ S++ S Sbjct: 180 RQNSSNGDPS 189