BLASTX nr result
ID: Panax24_contig00029424
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax24_contig00029424
(386 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_017243572.1 PREDICTED: transcription elongation factor B poly... 89 3e-19
XP_017245788.1 PREDICTED: uncharacterized protein LOC108217469 [... 74 8e-15
XP_016668129.1 PREDICTED: transcription elongation factor B poly... 71 2e-12
XP_016718653.1 PREDICTED: transcription elongation factor B poly... 71 2e-12
XP_012483379.1 PREDICTED: transcription elongation factor B poly... 71 2e-12
XP_011008965.1 PREDICTED: uncharacterized protein LOC105114188 [... 67 4e-12
XP_012070201.1 PREDICTED: elongin-A [Jatropha curcas] KDP39805.1... 70 6e-12
XP_017608503.1 PREDICTED: transcription elongation factor B poly... 70 7e-12
KHF97908.1 Elongin-A [Gossypium arboreum] 70 7e-12
KZM99339.1 hypothetical protein DCAR_013299 [Daucus carota subsp... 69 1e-11
XP_017245939.1 PREDICTED: uncharacterized protein LOC108217610 [... 69 1e-11
XP_002317925.1 hypothetical protein POPTR_0012s05560g [Populus t... 69 2e-11
OAY57308.1 hypothetical protein MANES_02G087000 [Manihot esculen... 69 2e-11
OMO60894.1 RNA polymerase II transcription factor SIII, subunit ... 67 3e-11
XP_014522546.1 PREDICTED: transcription elongation factor B poly... 67 6e-11
XP_011008966.1 PREDICTED: transcription elongation factor B poly... 67 8e-11
XP_006448014.1 hypothetical protein CICLE_v10016502mg [Citrus cl... 67 1e-10
XP_019440699.1 PREDICTED: uncharacterized protein LOC109345894 i... 66 1e-10
XP_019440697.1 PREDICTED: uncharacterized protein LOC109345894 i... 66 1e-10
XP_008342397.1 PREDICTED: transcription elongation factor B poly... 66 1e-10
>XP_017243572.1 PREDICTED: transcription elongation factor B polypeptide 3-like
[Daucus carota subsp. sativus] XP_017243573.1 PREDICTED:
transcription elongation factor B polypeptide 3-like
[Daucus carota subsp. sativus] KZM99346.1 hypothetical
protein DCAR_013292 [Daucus carota subsp. sativus]
Length = 234
Score = 89.0 bits (219), Expect = 3e-19
Identities = 44/66 (66%), Positives = 56/66 (84%), Gaps = 4/66 (6%)
Frame = +1
Query: 1 IGNSKSSFMKKSKVDFLKSQEVKNLTAMKRNAVQRNNSPLSIKKPSGF----SASTSQDI 168
+G+SKS+ MKKSKVDFLKSQEV+NLTA+++N VQ+++ PL I+KP GF SASTSQ+I
Sbjct: 169 VGSSKSNLMKKSKVDFLKSQEVRNLTALRKNVVQKDDRPLCIRKPGGFSSKGSASTSQNI 228
Query: 169 KPLQRR 186
KP QRR
Sbjct: 229 KPFQRR 234
>XP_017245788.1 PREDICTED: uncharacterized protein LOC108217469 [Daucus carota
subsp. sativus]
Length = 103
Score = 74.3 bits (181), Expect = 8e-15
Identities = 37/66 (56%), Positives = 51/66 (77%), Gaps = 4/66 (6%)
Frame = +1
Query: 1 IGNSKSSFMKKSKVDFLKSQEVKNLTAMKRNAVQRNNSPLSIKKPSGF----SASTSQDI 168
+G+SK S MKKS+ DF+ SQEV+NLTA+++NAVQ+N+ PL I++P GF S+S SQ
Sbjct: 38 VGSSKGSLMKKSRDDFVNSQEVRNLTALRQNAVQKNDRPLCIREPGGFSSNGSSSNSQGS 97
Query: 169 KPLQRR 186
+ LQRR
Sbjct: 98 RALQRR 103
>XP_016668129.1 PREDICTED: transcription elongation factor B polypeptide 3-like
[Gossypium hirsutum] XP_016668130.1 PREDICTED:
transcription elongation factor B polypeptide 3-like
[Gossypium hirsutum] XP_016668131.1 PREDICTED:
transcription elongation factor B polypeptide 3-like
[Gossypium hirsutum]
Length = 237
Score = 70.9 bits (172), Expect = 2e-12
Identities = 38/66 (57%), Positives = 49/66 (74%), Gaps = 4/66 (6%)
Frame = +1
Query: 1 IGNSKSSFMKKSKVDFLKSQEVKNLTAMKRNAVQRNNSPLSIKKPSGF----SASTSQDI 168
+ N KS+ MKK+K+D +KSQEVKNL AMK+ AVQ ++S +I K SGF SASTS+
Sbjct: 171 MSNVKSNIMKKAKIDLMKSQEVKNLAAMKKKAVQSHHSGTTITKSSGFCGKNSASTSKHS 230
Query: 169 KPLQRR 186
KPL+RR
Sbjct: 231 KPLERR 236
>XP_016718653.1 PREDICTED: transcription elongation factor B polypeptide 3-like
[Gossypium hirsutum]
Length = 237
Score = 70.9 bits (172), Expect = 2e-12
Identities = 38/66 (57%), Positives = 49/66 (74%), Gaps = 4/66 (6%)
Frame = +1
Query: 1 IGNSKSSFMKKSKVDFLKSQEVKNLTAMKRNAVQRNNSPLSIKKPSGF----SASTSQDI 168
+ N KS+ MKK+K+D +KSQEVKNL AMK+ AVQ ++S +I K SGF SASTS+
Sbjct: 171 MSNVKSNIMKKAKIDLMKSQEVKNLAAMKKKAVQSHHSGTTITKSSGFCGKNSASTSKHS 230
Query: 169 KPLQRR 186
KPL+RR
Sbjct: 231 KPLERR 236
>XP_012483379.1 PREDICTED: transcription elongation factor B polypeptide 3
[Gossypium raimondii] KJB33266.1 hypothetical protein
B456_006G004800 [Gossypium raimondii]
Length = 237
Score = 70.9 bits (172), Expect = 2e-12
Identities = 38/66 (57%), Positives = 49/66 (74%), Gaps = 4/66 (6%)
Frame = +1
Query: 1 IGNSKSSFMKKSKVDFLKSQEVKNLTAMKRNAVQRNNSPLSIKKPSGF----SASTSQDI 168
+ N KS+ MKK+K+D +KSQEVKNL AMK+ AVQ ++S +I K SGF SASTS+
Sbjct: 171 MSNVKSNIMKKAKIDLMKSQEVKNLAAMKKKAVQSHHSGTTITKSSGFCGKNSASTSKHS 230
Query: 169 KPLQRR 186
KPL+RR
Sbjct: 231 KPLERR 236
>XP_011008965.1 PREDICTED: uncharacterized protein LOC105114188 [Populus
euphratica]
Length = 107
Score = 67.4 bits (163), Expect = 4e-12
Identities = 33/66 (50%), Positives = 50/66 (75%), Gaps = 4/66 (6%)
Frame = +1
Query: 1 IGNSKSSFMKKSKVDFLKSQEVKNLTAMKRNAVQRNNSPLSIKKPSGF----SASTSQDI 168
+ N KS+ MKK+K+DFLKS+EV+N+ AM++NA+QRN+S S+ KP G S+++S +
Sbjct: 41 LSNGKSNLMKKAKMDFLKSREVQNIAAMRKNALQRNSSSSSMMKPPGSFPGKSSASSNPV 100
Query: 169 KPLQRR 186
K L+RR
Sbjct: 101 KSLERR 106
>XP_012070201.1 PREDICTED: elongin-A [Jatropha curcas] KDP39805.1 hypothetical
protein JCGZ_03941 [Jatropha curcas]
Length = 226
Score = 69.7 bits (169), Expect = 6e-12
Identities = 37/66 (56%), Positives = 49/66 (74%), Gaps = 4/66 (6%)
Frame = +1
Query: 1 IGNSKSSFMKKSKVDFLKSQEVKNLTAMKRNAVQRNNSPLSIKKPSGF----SASTSQDI 168
+ N KS+ MKKSK+DFLKS+EV+N+ AMK+ +VQRNN S+ KPS F SAS+S+
Sbjct: 160 LSNVKSNIMKKSKIDFLKSREVQNIAAMKKISVQRNNRTSSVIKPSSFPGNNSASSSKPS 219
Query: 169 KPLQRR 186
K L+RR
Sbjct: 220 KSLERR 225
>XP_017608503.1 PREDICTED: transcription elongation factor B polypeptide 3
[Gossypium arboreum] XP_017608504.1 PREDICTED:
transcription elongation factor B polypeptide 3
[Gossypium arboreum]
Length = 237
Score = 69.7 bits (169), Expect = 7e-12
Identities = 37/66 (56%), Positives = 49/66 (74%), Gaps = 4/66 (6%)
Frame = +1
Query: 1 IGNSKSSFMKKSKVDFLKSQEVKNLTAMKRNAVQRNNSPLSIKKPSGF----SASTSQDI 168
+ N KS+ +KK+K+D +KSQEVKNL AMK+ AVQ ++S +I K SGF SASTS+
Sbjct: 171 MSNVKSNILKKAKIDLMKSQEVKNLAAMKKKAVQSHHSGTTITKSSGFCGKNSASTSKHS 230
Query: 169 KPLQRR 186
KPL+RR
Sbjct: 231 KPLERR 236
>KHF97908.1 Elongin-A [Gossypium arboreum]
Length = 237
Score = 69.7 bits (169), Expect = 7e-12
Identities = 38/66 (57%), Positives = 48/66 (72%), Gaps = 4/66 (6%)
Frame = +1
Query: 1 IGNSKSSFMKKSKVDFLKSQEVKNLTAMKRNAVQRNNSPLSIKKPSGF----SASTSQDI 168
+ N KS+ MKK+K+D +KSQEVKNL AMK+ AVQ +S +I K SGF SASTS+
Sbjct: 171 MSNVKSNIMKKAKIDLMKSQEVKNLAAMKKKAVQSYHSGTTITKSSGFCGKNSASTSKHS 230
Query: 169 KPLQRR 186
KPL+RR
Sbjct: 231 KPLERR 236
>KZM99339.1 hypothetical protein DCAR_013299 [Daucus carota subsp. sativus]
Length = 219
Score = 68.9 bits (167), Expect = 1e-11
Identities = 36/66 (54%), Positives = 49/66 (74%), Gaps = 4/66 (6%)
Frame = +1
Query: 1 IGNSKSSFMKKSKVDFLKSQEVKNLTAMKRNAVQRNNSPLSIKKPSGF----SASTSQDI 168
+G+SKSS MKKS+ DF+ SQEV+NL A+++NAVQ+N PL I++ G S+S+SQ
Sbjct: 154 VGSSKSSLMKKSREDFVNSQEVRNLKALRKNAVQKNGRPLCIREYGGVSSNGSSSSSQGS 213
Query: 169 KPLQRR 186
K LQRR
Sbjct: 214 KELQRR 219
>XP_017245939.1 PREDICTED: uncharacterized protein LOC108217610 [Daucus carota
subsp. sativus]
Length = 236
Score = 68.9 bits (167), Expect = 1e-11
Identities = 36/66 (54%), Positives = 49/66 (74%), Gaps = 4/66 (6%)
Frame = +1
Query: 1 IGNSKSSFMKKSKVDFLKSQEVKNLTAMKRNAVQRNNSPLSIKKPSGF----SASTSQDI 168
+G+SKSS MKKS+ DF+ SQEV+NL A+++NAVQ+N PL I++ G S+S+SQ
Sbjct: 171 VGSSKSSLMKKSREDFVNSQEVRNLKALRKNAVQKNGRPLCIREYGGVSSNGSSSSSQGS 230
Query: 169 KPLQRR 186
K LQRR
Sbjct: 231 KELQRR 236
>XP_002317925.1 hypothetical protein POPTR_0012s05560g [Populus trichocarpa]
ABK92704.1 unknown [Populus trichocarpa] EEE96145.1
hypothetical protein POPTR_0012s05560g [Populus
trichocarpa]
Length = 227
Score = 68.6 bits (166), Expect = 2e-11
Identities = 34/66 (51%), Positives = 50/66 (75%), Gaps = 4/66 (6%)
Frame = +1
Query: 1 IGNSKSSFMKKSKVDFLKSQEVKNLTAMKRNAVQRNNSPLSIKKPSGF----SASTSQDI 168
+ N KS+ MKK+K+DFLKS+EV+N+ AMK+NA+QRN+S S+ KP G S+++S +
Sbjct: 161 LSNGKSNLMKKAKMDFLKSREVQNIAAMKKNALQRNSSSSSMMKPPGSFPGKSSASSNPM 220
Query: 169 KPLQRR 186
KP +RR
Sbjct: 221 KPRERR 226
>OAY57308.1 hypothetical protein MANES_02G087000 [Manihot esculenta] OAY57309.1
hypothetical protein MANES_02G087000 [Manihot esculenta]
Length = 234
Score = 68.6 bits (166), Expect = 2e-11
Identities = 36/66 (54%), Positives = 49/66 (74%), Gaps = 4/66 (6%)
Frame = +1
Query: 1 IGNSKSSFMKKSKVDFLKSQEVKNLTAMKRNAVQRNNSPLSIKKPSGF----SASTSQDI 168
+ + KS+ MKKSKV+FLKS+EVKN+ AMK+ +VQRNNS S+ K GF SAS+S++
Sbjct: 168 LSHVKSNLMKKSKVEFLKSREVKNIAAMKKISVQRNNSASSVTKTGGFPGNNSASSSRET 227
Query: 169 KPLQRR 186
K +RR
Sbjct: 228 KSFERR 233
>OMO60894.1 RNA polymerase II transcription factor SIII, subunit A [Corchorus
olitorius]
Length = 211
Score = 67.4 bits (163), Expect = 3e-11
Identities = 37/66 (56%), Positives = 46/66 (69%), Gaps = 4/66 (6%)
Frame = +1
Query: 1 IGNSKSSFMKKSKVDFLKSQEVKNLTAMKRNAVQRNNSPLSIKKPSGF----SASTSQDI 168
+ N KS+ MKK+K+D LKSQEVKNLTA++R AVQ S S+ K SG SASTS+
Sbjct: 145 LSNCKSNIMKKAKLDLLKSQEVKNLTALRRKAVQGQYSGTSMTKSSGLNGKNSASTSRQT 204
Query: 169 KPLQRR 186
KP +RR
Sbjct: 205 KPFERR 210
>XP_014522546.1 PREDICTED: transcription elongation factor B polypeptide 3 [Vigna
radiata var. radiata]
Length = 230
Score = 67.0 bits (162), Expect = 6e-11
Identities = 32/64 (50%), Positives = 48/64 (75%), Gaps = 2/64 (3%)
Frame = +1
Query: 1 IGNSKSSFMKKSKVDFLKSQEVKNLTAMKRNAVQRNNSPLSIKKPSGFS--ASTSQDIKP 174
+GN KS+ MKK+K++F+KSQEVKN+ AMK+N++QR+ S S+ K S S+S+DIK
Sbjct: 165 VGNVKSNIMKKAKIEFMKSQEVKNIAAMKKNSIQRSQSSSSVTKSRNISGIGSSSKDIKS 224
Query: 175 LQRR 186
++R
Sbjct: 225 TKKR 228
>XP_011008966.1 PREDICTED: transcription elongation factor B polypeptide 3 [Populus
euphratica]
Length = 227
Score = 66.6 bits (161), Expect = 8e-11
Identities = 33/66 (50%), Positives = 50/66 (75%), Gaps = 4/66 (6%)
Frame = +1
Query: 1 IGNSKSSFMKKSKVDFLKSQEVKNLTAMKRNAVQRNNSPLSIKKPSGF----SASTSQDI 168
+ N KS+ MKK+K+DFLKS+EV+N+ AM++NA+QRN+S S+ KP G S+++S +
Sbjct: 161 LSNGKSNLMKKAKMDFLKSREVQNIAAMRKNALQRNSSSSSMMKPPGSFPGKSSASSNPM 220
Query: 169 KPLQRR 186
K L+RR
Sbjct: 221 KSLERR 226
>XP_006448014.1 hypothetical protein CICLE_v10016502mg [Citrus clementina]
XP_006492250.1 PREDICTED: transcription elongation
factor B polypeptide 3 [Citrus sinensis] XP_006495225.1
PREDICTED: transcription elongation factor B polypeptide
3-like [Citrus sinensis] ESR61254.1 hypothetical protein
CICLE_v10016502mg [Citrus clementina]
Length = 237
Score = 66.6 bits (161), Expect = 1e-10
Identities = 39/66 (59%), Positives = 43/66 (65%), Gaps = 4/66 (6%)
Frame = +1
Query: 1 IGNSKSSFMKKSKVDFLKSQEVKNLTAMKRNAVQRNNSPLSIKKPSGFSA----STSQDI 168
I KSS MKK+K+D LKSQE KNL AMK+NAVQR SP K S FS+ STS
Sbjct: 171 ISGGKSSLMKKAKLDLLKSQEFKNLAAMKKNAVQRTYSPAPAKGSSVFSSKASGSTSNHS 230
Query: 169 KPLQRR 186
KPL RR
Sbjct: 231 KPLGRR 236
>XP_019440699.1 PREDICTED: uncharacterized protein LOC109345894 isoform X2 [Lupinus
angustifolius] OIW13404.1 hypothetical protein
TanjilG_19756 [Lupinus angustifolius]
Length = 227
Score = 66.2 bits (160), Expect = 1e-10
Identities = 36/63 (57%), Positives = 45/63 (71%), Gaps = 2/63 (3%)
Frame = +1
Query: 1 IGNSKSSFMKKSKVDFLKSQEVKNLTAMKRNAVQRNNSPLSIKKPSGFS--ASTSQDIKP 174
+ N KS+ MKK+K++FLKS EVKNL AMKRN++QRN S SI K S ASTS+D K
Sbjct: 163 VSNVKSNIMKKAKIEFLKSPEVKNLAAMKRNSIQRNVSSSSIMKTGSISRIASTSKDPKS 222
Query: 175 LQR 183
+R
Sbjct: 223 TKR 225
>XP_019440697.1 PREDICTED: uncharacterized protein LOC109345894 isoform X1 [Lupinus
angustifolius] XP_019440698.1 PREDICTED: uncharacterized
protein LOC109345894 isoform X1 [Lupinus angustifolius]
Length = 229
Score = 66.2 bits (160), Expect = 1e-10
Identities = 36/63 (57%), Positives = 45/63 (71%), Gaps = 2/63 (3%)
Frame = +1
Query: 1 IGNSKSSFMKKSKVDFLKSQEVKNLTAMKRNAVQRNNSPLSIKKPSGFS--ASTSQDIKP 174
+ N KS+ MKK+K++FLKS EVKNL AMKRN++QRN S SI K S ASTS+D K
Sbjct: 165 VSNVKSNIMKKAKIEFLKSPEVKNLAAMKRNSIQRNVSSSSIMKTGSISRIASTSKDPKS 224
Query: 175 LQR 183
+R
Sbjct: 225 TKR 227
>XP_008342397.1 PREDICTED: transcription elongation factor B polypeptide 3-like
[Malus domestica]
Length = 231
Score = 66.2 bits (160), Expect = 1e-10
Identities = 35/61 (57%), Positives = 47/61 (77%), Gaps = 4/61 (6%)
Frame = +1
Query: 13 KSSFMKKSKVDFLKSQEVKNLTAMKRNAVQRNNSPLSIKKPSGF----SASTSQDIKPLQ 180
KS+ MKK+K+DFLKS EVKNL AMKRNA+Q++ S +K+P+ F SAS+S+ IKP +
Sbjct: 168 KSNLMKKAKLDFLKSNEVKNLAAMKRNALQKSYSAPPMKRPAAFSGNASASSSKQIKPPK 227
Query: 181 R 183
R
Sbjct: 228 R 228