BLASTX nr result

ID: Panax24_contig00029342 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00029342
         (402 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_010263324.1 PREDICTED: disease resistance protein TAO1-like [...    58   4e-07
XP_019054016.1 PREDICTED: LOW QUALITY PROTEIN: TMV resistance pr...    55   5e-06
XP_012091992.1 PREDICTED: TMV resistance protein N-like [Jatroph...    55   5e-06

>XP_010263324.1 PREDICTED: disease resistance protein TAO1-like [Nelumbo nucifera]
          Length = 637

 Score = 57.8 bits (138), Expect = 4e-07
 Identities = 40/106 (37%), Positives = 52/106 (49%), Gaps = 13/106 (12%)
 Frame = +2

Query: 5   FCNLPSTLCRLSNLTDLDLSYCKXXXXXXXXXXXXHKLNVHGCTAMKIIPNLSNS----- 169
           FC+LP TL   S LT L LS C               L+ +GCT+M+ +PNLSN+     
Sbjct: 418 FCSLPDTLKDFSLLTSLHLSDCTNLKALPELPSSLMHLHANGCTSMERLPNLSNNLNLRS 477

Query: 170 --------LVQVQGLENLKLTSFSMTGCNNLAMNTSFN*SLFQRFF 283
                   LV++QGL+ L L    + GC  LA NT  N  LF+  F
Sbjct: 478 LVLRCCNKLVEIQGLQMLHLELIDLAGCKELA-NTWCN-FLFKELF 521


>XP_019054016.1 PREDICTED: LOW QUALITY PROTEIN: TMV resistance protein N-like
            [Nelumbo nucifera]
          Length = 1189

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 39/117 (33%), Positives = 52/117 (44%), Gaps = 16/117 (13%)
 Frame = +2

Query: 5    FCNLPSTLCRLSNLTDLDLSYCKXXXXXXXXXXXXHKLNVHGCTAMKIIPNLSNS----- 169
            FC LP TL   S+L  L +  CK              L   GCT+M+ + NLS +     
Sbjct: 937  FCRLPDTLSHFSHLRTLVVRNCKNLCTIPNLPSHLETLRADGCTSMEKLQNLSRAPKLSN 996

Query: 170  --------LVQVQGLENLKLTSFSMTGCNNLAMNTSFN*SLFQRFFE---RGHDESS 307
                    L+++QGLENL+L    + GC  L    S+   L  RF E   RG D S+
Sbjct: 997  LNLRNCEKLIEIQGLENLRLWKIDLLGCYKL--EHSWKSILQNRFLEAMLRGEDIST 1051


>XP_012091992.1 PREDICTED: TMV resistance protein N-like [Jatropha curcas]
          Length = 1361

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 36/90 (40%), Positives = 46/90 (51%), Gaps = 14/90 (15%)
 Frame = +2

Query: 2    DFCNLPSTLCRLSNLTDLDLSYCKXXXXXXXXXXXXHKLNVHGCTAMKIIPNLSN----- 166
            DFC+LPS+L  LS L DL LS+CK             KLNV  CTA++ + NL N     
Sbjct: 1089 DFCSLPSSLRGLSVLEDLSLSHCKQLKSLPLLPSSVLKLNVAYCTALEGVCNLENLVSLQ 1148

Query: 167  --------SLVQVQGLENLK-LTSFSMTGC 229
                     ++ +QGLE LK L    +TGC
Sbjct: 1149 DLDLTNCSRIIDIQGLECLKCLRRLYLTGC 1178


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