BLASTX nr result

ID: Panax24_contig00029193 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00029193
         (573 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017233600.1 PREDICTED: mechanosensitive ion channel protein 1...    74   7e-12
XP_017233592.1 PREDICTED: mechanosensitive ion channel protein 1...    74   7e-12
XP_017231828.1 PREDICTED: mechanosensitive ion channel protein 1...    73   1e-11
XP_017230073.1 PREDICTED: mechanosensitive ion channel protein 1...    70   1e-10
XP_017230072.1 PREDICTED: mechanosensitive ion channel protein 1...    70   1e-10
XP_017230074.1 PREDICTED: mechanosensitive ion channel protein 1...    66   2e-09
XP_017231844.1 PREDICTED: mechanosensitive ion channel protein 1...    62   5e-08
KZN11058.1 hypothetical protein DCAR_003714 [Daucus carota subsp...    58   2e-06

>XP_017233600.1 PREDICTED: mechanosensitive ion channel protein 10-like isoform X2
           [Daucus carota subsp. sativus]
          Length = 765

 Score = 73.6 bits (179), Expect = 7e-12
 Identities = 39/67 (58%), Positives = 44/67 (65%)
 Frame = -2

Query: 203 MDANVMSSNSGEISMTEGNKSGEVVVMIYGQEEDEKSSLHLVSGDSHIGAVQFAPLRCPS 24
           MDAN    +SGEISM E  KS +VVVM+ G+E D KSS   VS D  IG V+F P   PS
Sbjct: 1   MDANGKKKSSGEISMAESRKSSDVVVMVSGEERDVKSSPRRVSDDLPIGNVKFVPTSSPS 60

Query: 23  PETARFS 3
           PE ARFS
Sbjct: 61  PENARFS 67


>XP_017233592.1 PREDICTED: mechanosensitive ion channel protein 10-like isoform X1
           [Daucus carota subsp. sativus]
          Length = 769

 Score = 73.6 bits (179), Expect = 7e-12
 Identities = 39/67 (58%), Positives = 44/67 (65%)
 Frame = -2

Query: 203 MDANVMSSNSGEISMTEGNKSGEVVVMIYGQEEDEKSSLHLVSGDSHIGAVQFAPLRCPS 24
           MDAN    +SGEISM E  KS +VVVM+ G+E D KSS   VS D  IG V+F P   PS
Sbjct: 1   MDANGKKKSSGEISMAESRKSSDVVVMVSGEERDVKSSPRRVSDDLPIGNVKFVPTSSPS 60

Query: 23  PETARFS 3
           PE ARFS
Sbjct: 61  PENARFS 67


>XP_017231828.1 PREDICTED: mechanosensitive ion channel protein 10 isoform X1
           [Daucus carota subsp. sativus] XP_017231836.1 PREDICTED:
           mechanosensitive ion channel protein 10 isoform X1
           [Daucus carota subsp. sativus] KZN08151.1 hypothetical
           protein DCAR_000820 [Daucus carota subsp. sativus]
          Length = 772

 Score = 72.8 bits (177), Expect = 1e-11
 Identities = 39/67 (58%), Positives = 48/67 (71%)
 Frame = -2

Query: 203 MDANVMSSNSGEISMTEGNKSGEVVVMIYGQEEDEKSSLHLVSGDSHIGAVQFAPLRCPS 24
           M A V +  +GEISM+E  KS EVVVMI GQE+D K+S   VS DSH  AV+FAP+  PS
Sbjct: 1   MAAIVSNPKTGEISMSEAKKSSEVVVMISGQEKDVKNSPRRVSIDSHFDAVKFAPVGMPS 60

Query: 23  PETARFS 3
           PE AR++
Sbjct: 61  PEIARYA 67


>XP_017230073.1 PREDICTED: mechanosensitive ion channel protein 10-like isoform X2
           [Daucus carota subsp. sativus]
          Length = 786

 Score = 70.1 bits (170), Expect = 1e-10
 Identities = 39/79 (49%), Positives = 50/79 (63%), Gaps = 10/79 (12%)
 Frame = -2

Query: 209 GLMDANVMSSNSGEISMTEGNKSGEVVVMIYG----------QEEDEKSSLHLVSGDSHI 60
           GLM ANV +S +GEISM E  +SG+VVVM+ G          QE+D K+S   +S DSH 
Sbjct: 8   GLMAANVGNSKTGEISMLETKRSGDVVVMVSGQEKDVKNSPRQEKDVKNSPRRLSSDSHF 67

Query: 59  GAVQFAPLRCPSPETARFS 3
             V+F P+  PSPE ARF+
Sbjct: 68  EGVKFVPMGTPSPENARFA 86


>XP_017230072.1 PREDICTED: mechanosensitive ion channel protein 10-like isoform X1
           [Daucus carota subsp. sativus]
          Length = 789

 Score = 70.1 bits (170), Expect = 1e-10
 Identities = 39/79 (49%), Positives = 50/79 (63%), Gaps = 10/79 (12%)
 Frame = -2

Query: 209 GLMDANVMSSNSGEISMTEGNKSGEVVVMIYG----------QEEDEKSSLHLVSGDSHI 60
           GLM ANV +S +GEISM E  +SG+VVVM+ G          QE+D K+S   +S DSH 
Sbjct: 11  GLMAANVGNSKTGEISMLETKRSGDVVVMVSGQEKDVKNSPRQEKDVKNSPRRLSSDSHF 70

Query: 59  GAVQFAPLRCPSPETARFS 3
             V+F P+  PSPE ARF+
Sbjct: 71  EGVKFVPMGTPSPENARFA 89


>XP_017230074.1 PREDICTED: mechanosensitive ion channel protein 10-like isoform X3
           [Daucus carota subsp. sativus] XP_017230075.1 PREDICTED:
           mechanosensitive ion channel protein 10-like isoform X3
           [Daucus carota subsp. sativus] XP_017230076.1 PREDICTED:
           mechanosensitive ion channel protein 10-like isoform X3
           [Daucus carota subsp. sativus] KZN11728.1 hypothetical
           protein DCAR_004384 [Daucus carota subsp. sativus]
          Length = 777

 Score = 66.2 bits (160), Expect = 2e-09
 Identities = 37/77 (48%), Positives = 48/77 (62%), Gaps = 10/77 (12%)
 Frame = -2

Query: 203 MDANVMSSNSGEISMTEGNKSGEVVVMIYG----------QEEDEKSSLHLVSGDSHIGA 54
           M ANV +S +GEISM E  +SG+VVVM+ G          QE+D K+S   +S DSH   
Sbjct: 1   MAANVGNSKTGEISMLETKRSGDVVVMVSGQEKDVKNSPRQEKDVKNSPRRLSSDSHFEG 60

Query: 53  VQFAPLRCPSPETARFS 3
           V+F P+  PSPE ARF+
Sbjct: 61  VKFVPMGTPSPENARFA 77


>XP_017231844.1 PREDICTED: mechanosensitive ion channel protein 10 isoform X2
           [Daucus carota subsp. sativus]
          Length = 758

 Score = 62.4 bits (150), Expect = 5e-08
 Identities = 32/53 (60%), Positives = 39/53 (73%)
 Frame = -2

Query: 161 MTEGNKSGEVVVMIYGQEEDEKSSLHLVSGDSHIGAVQFAPLRCPSPETARFS 3
           M+E  KS EVVVMI GQE+D K+S   VS DSH  AV+FAP+  PSPE AR++
Sbjct: 1   MSEAKKSSEVVVMISGQEKDVKNSPRRVSIDSHFDAVKFAPVGMPSPEIARYA 53


>KZN11058.1 hypothetical protein DCAR_003714 [Daucus carota subsp. sativus]
          Length = 514

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 30/53 (56%), Positives = 34/53 (64%)
 Frame = -2

Query: 161 MTEGNKSGEVVVMIYGQEEDEKSSLHLVSGDSHIGAVQFAPLRCPSPETARFS 3
           M E  KS +VVVM+ G+E D KSS   VS D  IG V+F P   PSPE ARFS
Sbjct: 1   MAESRKSSDVVVMVSGEERDVKSSPRRVSDDLPIGNVKFVPTSSPSPENARFS 53


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