BLASTX nr result
ID: Panax24_contig00029049
seq
BLASTX 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax24_contig00029049 (406 letters) Database: ./nr 115,041,592 sequences; 42,171,959,267 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value XP_017252680.1 PREDICTED: replication factor C subunit 1 [Daucus... 68 1e-10 KZM94968.1 hypothetical protein DCAR_018210 [Daucus carota subsp... 68 1e-10 KHG30496.1 replication factor c large subunit [Gossypium arboreum] 64 3e-09 XP_018851841.1 PREDICTED: replication factor C subunit 1 [Juglan... 62 1e-08 KJB75074.1 hypothetical protein B456_012G023000 [Gossypium raimo... 62 1e-08 KJB75073.1 hypothetical protein B456_012G023000 [Gossypium raimo... 62 1e-08 XP_016714165.1 PREDICTED: replication factor C subunit 1 [Gossyp... 62 1e-08 XP_012459306.1 PREDICTED: replication factor C subunit 1 [Gossyp... 62 1e-08 XP_018826530.1 PREDICTED: replication factor C subunit 1-like [J... 62 2e-08 XP_017615387.1 PREDICTED: replication factor C subunit 1 [Gossyp... 61 3e-08 XP_010248015.1 PREDICTED: replication factor C subunit 1 isoform... 60 9e-08 XP_010248008.1 PREDICTED: replication factor C subunit 1 isoform... 60 9e-08 OMO94457.1 hypothetical protein COLO4_16322 [Corchorus olitorius] 58 4e-07 OMO75794.1 hypothetical protein CCACVL1_16037 [Corchorus capsula... 58 4e-07 XP_017985217.1 PREDICTED: replication factor C subunit 1 [Theobr... 57 6e-07 EOY19345.1 Replication factor C subunit 1 [Theobroma cacao] 57 6e-07 CDP15576.1 unnamed protein product [Coffea canephora] 57 8e-07 KCW50954.1 hypothetical protein EUGRSUZ_J00591 [Eucalyptus grandis] 57 1e-06 XP_010031591.1 PREDICTED: replication factor C subunit 1 [Eucaly... 57 1e-06 XP_010681144.1 PREDICTED: replication factor C subunit 1 [Beta v... 55 5e-06 >XP_017252680.1 PREDICTED: replication factor C subunit 1 [Daucus carota subsp. sativus] XP_017252681.1 PREDICTED: replication factor C subunit 1 [Daucus carota subsp. sativus] Length = 995 Score = 68.2 bits (165), Expect = 1e-10 Identities = 35/67 (52%), Positives = 45/67 (67%) Frame = +3 Query: 42 FVLTNSKRKGSVEVTPNKKSRSGLGRGVAKKSADINECDEDNMDNTDTKSHSKSAXXXXX 221 F + +SKRKG VEVTPNK+S+SG+GRG AKK D++E DED++ TKS KSA Sbjct: 93 FEMPSSKRKGLVEVTPNKRSKSGVGRGAAKKGIDLDESDEDDVKVKATKSTPKSAGRGRG 152 Query: 222 XXTASLA 242 S+A Sbjct: 153 GKAVSVA 159 >KZM94968.1 hypothetical protein DCAR_018210 [Daucus carota subsp. sativus] Length = 1012 Score = 68.2 bits (165), Expect = 1e-10 Identities = 35/67 (52%), Positives = 45/67 (67%) Frame = +3 Query: 42 FVLTNSKRKGSVEVTPNKKSRSGLGRGVAKKSADINECDEDNMDNTDTKSHSKSAXXXXX 221 F + +SKRKG VEVTPNK+S+SG+GRG AKK D++E DED++ TKS KSA Sbjct: 93 FEMPSSKRKGLVEVTPNKRSKSGVGRGAAKKGIDLDESDEDDVKVKATKSTPKSAGRGRG 152 Query: 222 XXTASLA 242 S+A Sbjct: 153 GKAVSVA 159 >KHG30496.1 replication factor c large subunit [Gossypium arboreum] Length = 1005 Score = 63.9 bits (154), Expect = 3e-09 Identities = 36/67 (53%), Positives = 43/67 (64%) Frame = +3 Query: 60 KRKGSVEVTPNKKSRSGLGRGVAKKSADINECDEDNMDNTDTKSHSKSAXXXXXXXTASL 239 K K SV+VTP+KK +SG G+GVA+K+ DI+E DED D D KS KS AS Sbjct: 100 KSKNSVDVTPSKKLKSGSGKGVAQKAVDIDESDED--DVKDLKSPVKSGGKVRGGRGASK 157 Query: 240 APAGGRG 260 PAGGRG Sbjct: 158 GPAGGRG 164 >XP_018851841.1 PREDICTED: replication factor C subunit 1 [Juglans regia] Length = 954 Score = 62.4 bits (150), Expect = 1e-08 Identities = 35/73 (47%), Positives = 49/73 (67%) Frame = +3 Query: 42 FVLTNSKRKGSVEVTPNKKSRSGLGRGVAKKSADINECDEDNMDNTDTKSHSKSAXXXXX 221 FVL +S RK V+VTP+KK +SGLGRG+++K D+ E DE++ +T+T+ KS Sbjct: 98 FVLPSS-RKNLVDVTPSKKLKSGLGRGISQKPVDVEEGDEEDDKDTETQ---KSGGRGRG 153 Query: 222 XXTASLAPAGGRG 260 +S APAGGRG Sbjct: 154 RRGSSAAPAGGRG 166 >KJB75074.1 hypothetical protein B456_012G023000 [Gossypium raimondii] Length = 811 Score = 62.0 bits (149), Expect = 1e-08 Identities = 35/67 (52%), Positives = 42/67 (62%) Frame = +3 Query: 60 KRKGSVEVTPNKKSRSGLGRGVAKKSADINECDEDNMDNTDTKSHSKSAXXXXXXXTASL 239 K K SV+VTP+KK +SG G+GVA+K+ DI+E DED D D KS K AS Sbjct: 102 KSKNSVDVTPSKKLKSGSGKGVAQKAVDIDESDED--DVKDLKSPVKPGGKVRGGRGASK 159 Query: 240 APAGGRG 260 PAGGRG Sbjct: 160 GPAGGRG 166 >KJB75073.1 hypothetical protein B456_012G023000 [Gossypium raimondii] Length = 852 Score = 62.0 bits (149), Expect = 1e-08 Identities = 35/67 (52%), Positives = 42/67 (62%) Frame = +3 Query: 60 KRKGSVEVTPNKKSRSGLGRGVAKKSADINECDEDNMDNTDTKSHSKSAXXXXXXXTASL 239 K K SV+VTP+KK +SG G+GVA+K+ DI+E DED D D KS K AS Sbjct: 102 KSKNSVDVTPSKKLKSGSGKGVAQKAVDIDESDED--DVKDLKSPVKPGGKVRGGRGASK 159 Query: 240 APAGGRG 260 PAGGRG Sbjct: 160 GPAGGRG 166 >XP_016714165.1 PREDICTED: replication factor C subunit 1 [Gossypium hirsutum] Length = 992 Score = 62.0 bits (149), Expect = 1e-08 Identities = 35/67 (52%), Positives = 42/67 (62%) Frame = +3 Query: 60 KRKGSVEVTPNKKSRSGLGRGVAKKSADINECDEDNMDNTDTKSHSKSAXXXXXXXTASL 239 K K SV+VTP+KK +SG G+GVA+K+ DI+E DED D D KS K AS Sbjct: 102 KSKNSVDVTPSKKLKSGSGKGVAQKAVDIDESDED--DVKDLKSPVKPGGKVRGGRGASK 159 Query: 240 APAGGRG 260 PAGGRG Sbjct: 160 GPAGGRG 166 >XP_012459306.1 PREDICTED: replication factor C subunit 1 [Gossypium raimondii] Length = 992 Score = 62.0 bits (149), Expect = 1e-08 Identities = 35/67 (52%), Positives = 42/67 (62%) Frame = +3 Query: 60 KRKGSVEVTPNKKSRSGLGRGVAKKSADINECDEDNMDNTDTKSHSKSAXXXXXXXTASL 239 K K SV+VTP+KK +SG G+GVA+K+ DI+E DED D D KS K AS Sbjct: 102 KSKNSVDVTPSKKLKSGSGKGVAQKAVDIDESDED--DVKDLKSPVKPGGKVRGGRGASK 159 Query: 240 APAGGRG 260 PAGGRG Sbjct: 160 GPAGGRG 166 >XP_018826530.1 PREDICTED: replication factor C subunit 1-like [Juglans regia] XP_018826531.1 PREDICTED: replication factor C subunit 1-like [Juglans regia] Length = 960 Score = 61.6 bits (148), Expect = 2e-08 Identities = 33/73 (45%), Positives = 48/73 (65%) Frame = +3 Query: 42 FVLTNSKRKGSVEVTPNKKSRSGLGRGVAKKSADINECDEDNMDNTDTKSHSKSAXXXXX 221 F+L +S RK V+ TP+KK +SGLGRG+++K D+ E DE++ +T+T+ KS Sbjct: 99 FILPSS-RKNLVDATPSKKLKSGLGRGISQKGVDVEESDEEDDKDTETQ---KSGGRGRG 154 Query: 222 XXTASLAPAGGRG 260 +S APAGGRG Sbjct: 155 RRGSSAAPAGGRG 167 >XP_017615387.1 PREDICTED: replication factor C subunit 1 [Gossypium arboreum] Length = 990 Score = 61.2 bits (147), Expect = 3e-08 Identities = 35/67 (52%), Positives = 42/67 (62%) Frame = +3 Query: 60 KRKGSVEVTPNKKSRSGLGRGVAKKSADINECDEDNMDNTDTKSHSKSAXXXXXXXTASL 239 K K SV+VTP+KK +SG G+GVA+K+ DI+ DED D D KS KS AS Sbjct: 100 KSKNSVDVTPSKKLKSGSGKGVAQKAVDIDGSDED--DVKDLKSPVKSGGKVRGGRGASK 157 Query: 240 APAGGRG 260 PAGGRG Sbjct: 158 GPAGGRG 164 >XP_010248015.1 PREDICTED: replication factor C subunit 1 isoform X2 [Nelumbo nucifera] Length = 974 Score = 59.7 bits (143), Expect = 9e-08 Identities = 34/73 (46%), Positives = 45/73 (61%) Frame = +3 Query: 42 FVLTNSKRKGSVEVTPNKKSRSGLGRGVAKKSADINECDEDNMDNTDTKSHSKSAXXXXX 221 FVL + K K S + TP KK +SG G+G+A+KS D +E DE+ D+ KS K+A Sbjct: 112 FVLPSLK-KNSAKDTPTKKLKSGSGKGIAQKSVDSDESDEEVPDDKTVKSPFKAAGRGAG 170 Query: 222 XXTASLAPAGGRG 260 A+ APAGGRG Sbjct: 171 GRGAAAAPAGGRG 183 >XP_010248008.1 PREDICTED: replication factor C subunit 1 isoform X1 [Nelumbo nucifera] Length = 975 Score = 59.7 bits (143), Expect = 9e-08 Identities = 34/73 (46%), Positives = 45/73 (61%) Frame = +3 Query: 42 FVLTNSKRKGSVEVTPNKKSRSGLGRGVAKKSADINECDEDNMDNTDTKSHSKSAXXXXX 221 FVL + K K S + TP KK +SG G+G+A+KS D +E DE+ D+ KS K+A Sbjct: 113 FVLPSLK-KNSAKDTPTKKLKSGSGKGIAQKSVDSDESDEEVPDDKTVKSPFKAAGRGAG 171 Query: 222 XXTASLAPAGGRG 260 A+ APAGGRG Sbjct: 172 GRGAAAAPAGGRG 184 >OMO94457.1 hypothetical protein COLO4_16322 [Corchorus olitorius] Length = 916 Score = 57.8 bits (138), Expect = 4e-07 Identities = 34/67 (50%), Positives = 41/67 (61%) Frame = +3 Query: 60 KRKGSVEVTPNKKSRSGLGRGVAKKSADINECDEDNMDNTDTKSHSKSAXXXXXXXTASL 239 K K SV+VTP+KK +SG GRGVA+K+ D + DED D D +S KS AS Sbjct: 99 KSKNSVDVTPSKKLKSGSGRGVAQKAVDTVDSDED--DAKDLESPVKSGGRGRGGRGASG 156 Query: 240 APAGGRG 260 APA GRG Sbjct: 157 APAAGRG 163 >OMO75794.1 hypothetical protein CCACVL1_16037 [Corchorus capsularis] Length = 921 Score = 57.8 bits (138), Expect = 4e-07 Identities = 34/67 (50%), Positives = 41/67 (61%) Frame = +3 Query: 60 KRKGSVEVTPNKKSRSGLGRGVAKKSADINECDEDNMDNTDTKSHSKSAXXXXXXXTASL 239 K K SV+VTP+KK +SG GRGVA+K+ D + DED D D +S KS AS Sbjct: 99 KSKNSVDVTPSKKLKSGSGRGVAQKAVDTVDSDED--DAKDLESPVKSGGRGRGGRGASG 156 Query: 240 APAGGRG 260 APA GRG Sbjct: 157 APAAGRG 163 >XP_017985217.1 PREDICTED: replication factor C subunit 1 [Theobroma cacao] XP_017985218.1 PREDICTED: replication factor C subunit 1 [Theobroma cacao] XP_017985219.1 PREDICTED: replication factor C subunit 1 [Theobroma cacao] Length = 957 Score = 57.4 bits (137), Expect = 6e-07 Identities = 34/68 (50%), Positives = 44/68 (64%), Gaps = 1/68 (1%) Frame = +3 Query: 60 KRKGSVEVTPNKKSRSGLGRGVAKKSADINECDEDNMDNTDTKSHSKSAXXXXXXXT-AS 236 K + +V+VTP+KK +SG GRGVA+K+ D +E DED D D +S KS T AS Sbjct: 100 KSRNTVDVTPSKKRKSGSGRGVAQKAEDNDESDED--DAKDLESPVKSGGRGGRGGTGAS 157 Query: 237 LAPAGGRG 260 +APA GRG Sbjct: 158 VAPASGRG 165 >EOY19345.1 Replication factor C subunit 1 [Theobroma cacao] Length = 1012 Score = 57.4 bits (137), Expect = 6e-07 Identities = 34/68 (50%), Positives = 44/68 (64%), Gaps = 1/68 (1%) Frame = +3 Query: 60 KRKGSVEVTPNKKSRSGLGRGVAKKSADINECDEDNMDNTDTKSHSKSAXXXXXXXT-AS 236 K + +V+VTP+KK +SG GRGVA+K+ D +E DED D D +S KS T AS Sbjct: 100 KSRNTVDVTPSKKRKSGSGRGVAQKAEDNDESDED--DAKDLESPVKSGGRGGRGGTGAS 157 Query: 237 LAPAGGRG 260 +APA GRG Sbjct: 158 VAPASGRG 165 >CDP15576.1 unnamed protein product [Coffea canephora] Length = 1020 Score = 57.0 bits (136), Expect = 8e-07 Identities = 30/60 (50%), Positives = 38/60 (63%) Frame = +3 Query: 84 TPNKKSRSGLGRGVAKKSADINECDEDNMDNTDTKSHSKSAXXXXXXXTASLAPAGGRGM 263 TP+KK +SG GRG+A+KSAD++E DED D TKSHSK A + AP +GM Sbjct: 113 TPSKKLKSGSGRGIARKSADVDESDED--DVIGTKSHSKPAGRGRGGKSGITAPGSRKGM 170 >KCW50954.1 hypothetical protein EUGRSUZ_J00591 [Eucalyptus grandis] Length = 899 Score = 56.6 bits (135), Expect = 1e-06 Identities = 32/61 (52%), Positives = 37/61 (60%) Frame = +3 Query: 78 EVTPNKKSRSGLGRGVAKKSADINECDEDNMDNTDTKSHSKSAXXXXXXXTASLAPAGGR 257 +VTP+KK +SG GRGV KK DI E D+D D+ KS KS AS APAGGR Sbjct: 120 DVTPSKKLKSGSGRGVPKKPVDIEESDDD--DHKCAKSPPKSGGRGRGGRGASAAPAGGR 177 Query: 258 G 260 G Sbjct: 178 G 178 >XP_010031591.1 PREDICTED: replication factor C subunit 1 [Eucalyptus grandis] KCW50953.1 hypothetical protein EUGRSUZ_J00591 [Eucalyptus grandis] Length = 966 Score = 56.6 bits (135), Expect = 1e-06 Identities = 32/61 (52%), Positives = 37/61 (60%) Frame = +3 Query: 78 EVTPNKKSRSGLGRGVAKKSADINECDEDNMDNTDTKSHSKSAXXXXXXXTASLAPAGGR 257 +VTP+KK +SG GRGV KK DI E D+D D+ KS KS AS APAGGR Sbjct: 120 DVTPSKKLKSGSGRGVPKKPVDIEESDDD--DHKCAKSPPKSGGRGRGGRGASAAPAGGR 177 Query: 258 G 260 G Sbjct: 178 G 178 >XP_010681144.1 PREDICTED: replication factor C subunit 1 [Beta vulgaris subsp. vulgaris] XP_010681145.1 PREDICTED: replication factor C subunit 1 [Beta vulgaris subsp. vulgaris] XP_019105805.1 PREDICTED: replication factor C subunit 1 [Beta vulgaris subsp. vulgaris] KMT08722.1 hypothetical protein BVRB_6g139950 [Beta vulgaris subsp. vulgaris] Length = 976 Score = 54.7 bits (130), Expect = 5e-06 Identities = 28/68 (41%), Positives = 39/68 (57%) Frame = +3 Query: 57 SKRKGSVEVTPNKKSRSGLGRGVAKKSADINECDEDNMDNTDTKSHSKSAXXXXXXXTAS 236 S +K S E TP+K+ + GRG+AKK D E DE+ ++ +T++ KSA TAS Sbjct: 114 STKKKSAEATPSKRLKGNSGRGIAKKEVDAEESDEEMDEDKETQTPVKSAGRGRGRGTAS 173 Query: 237 LAPAGGRG 260 A GRG Sbjct: 174 AAAPSGRG 181