BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00029049
         (406 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017252680.1 PREDICTED: replication factor C subunit 1 [Daucus...    68   1e-10
KZM94968.1 hypothetical protein DCAR_018210 [Daucus carota subsp...    68   1e-10
KHG30496.1 replication factor c large subunit [Gossypium arboreum]     64   3e-09
XP_018851841.1 PREDICTED: replication factor C subunit 1 [Juglan...    62   1e-08
KJB75074.1 hypothetical protein B456_012G023000 [Gossypium raimo...    62   1e-08
KJB75073.1 hypothetical protein B456_012G023000 [Gossypium raimo...    62   1e-08
XP_016714165.1 PREDICTED: replication factor C subunit 1 [Gossyp...    62   1e-08
XP_012459306.1 PREDICTED: replication factor C subunit 1 [Gossyp...    62   1e-08
XP_018826530.1 PREDICTED: replication factor C subunit 1-like [J...    62   2e-08
XP_017615387.1 PREDICTED: replication factor C subunit 1 [Gossyp...    61   3e-08
XP_010248015.1 PREDICTED: replication factor C subunit 1 isoform...    60   9e-08
XP_010248008.1 PREDICTED: replication factor C subunit 1 isoform...    60   9e-08
OMO94457.1 hypothetical protein COLO4_16322 [Corchorus olitorius]      58   4e-07
OMO75794.1 hypothetical protein CCACVL1_16037 [Corchorus capsula...    58   4e-07
XP_017985217.1 PREDICTED: replication factor C subunit 1 [Theobr...    57   6e-07
EOY19345.1 Replication factor C subunit 1 [Theobroma cacao]            57   6e-07
CDP15576.1 unnamed protein product [Coffea canephora]                  57   8e-07
KCW50954.1 hypothetical protein EUGRSUZ_J00591 [Eucalyptus grandis]    57   1e-06
XP_010031591.1 PREDICTED: replication factor C subunit 1 [Eucaly...    57   1e-06
XP_010681144.1 PREDICTED: replication factor C subunit 1 [Beta v...    55   5e-06

>XP_017252680.1 PREDICTED: replication factor C subunit 1 [Daucus carota subsp.
           sativus] XP_017252681.1 PREDICTED: replication factor C
           subunit 1 [Daucus carota subsp. sativus]
          Length = 995

 Score = 68.2 bits (165), Expect = 1e-10
 Identities = 35/67 (52%), Positives = 45/67 (67%)
 Frame = +3

Query: 42  FVLTNSKRKGSVEVTPNKKSRSGLGRGVAKKSADINECDEDNMDNTDTKSHSKSAXXXXX 221
           F + +SKRKG VEVTPNK+S+SG+GRG AKK  D++E DED++    TKS  KSA     
Sbjct: 93  FEMPSSKRKGLVEVTPNKRSKSGVGRGAAKKGIDLDESDEDDVKVKATKSTPKSAGRGRG 152

Query: 222 XXTASLA 242
               S+A
Sbjct: 153 GKAVSVA 159


>KZM94968.1 hypothetical protein DCAR_018210 [Daucus carota subsp. sativus]
          Length = 1012

 Score = 68.2 bits (165), Expect = 1e-10
 Identities = 35/67 (52%), Positives = 45/67 (67%)
 Frame = +3

Query: 42  FVLTNSKRKGSVEVTPNKKSRSGLGRGVAKKSADINECDEDNMDNTDTKSHSKSAXXXXX 221
           F + +SKRKG VEVTPNK+S+SG+GRG AKK  D++E DED++    TKS  KSA     
Sbjct: 93  FEMPSSKRKGLVEVTPNKRSKSGVGRGAAKKGIDLDESDEDDVKVKATKSTPKSAGRGRG 152

Query: 222 XXTASLA 242
               S+A
Sbjct: 153 GKAVSVA 159


>KHG30496.1 replication factor c large subunit [Gossypium arboreum]
          Length = 1005

 Score = 63.9 bits (154), Expect = 3e-09
 Identities = 36/67 (53%), Positives = 43/67 (64%)
 Frame = +3

Query: 60  KRKGSVEVTPNKKSRSGLGRGVAKKSADINECDEDNMDNTDTKSHSKSAXXXXXXXTASL 239
           K K SV+VTP+KK +SG G+GVA+K+ DI+E DED  D  D KS  KS         AS 
Sbjct: 100 KSKNSVDVTPSKKLKSGSGKGVAQKAVDIDESDED--DVKDLKSPVKSGGKVRGGRGASK 157

Query: 240 APAGGRG 260
            PAGGRG
Sbjct: 158 GPAGGRG 164


>XP_018851841.1 PREDICTED: replication factor C subunit 1 [Juglans regia]
          Length = 954

 Score = 62.4 bits (150), Expect = 1e-08
 Identities = 35/73 (47%), Positives = 49/73 (67%)
 Frame = +3

Query: 42  FVLTNSKRKGSVEVTPNKKSRSGLGRGVAKKSADINECDEDNMDNTDTKSHSKSAXXXXX 221
           FVL +S RK  V+VTP+KK +SGLGRG+++K  D+ E DE++  +T+T+   KS      
Sbjct: 98  FVLPSS-RKNLVDVTPSKKLKSGLGRGISQKPVDVEEGDEEDDKDTETQ---KSGGRGRG 153

Query: 222 XXTASLAPAGGRG 260
              +S APAGGRG
Sbjct: 154 RRGSSAAPAGGRG 166


>KJB75074.1 hypothetical protein B456_012G023000 [Gossypium raimondii]
          Length = 811

 Score = 62.0 bits (149), Expect = 1e-08
 Identities = 35/67 (52%), Positives = 42/67 (62%)
 Frame = +3

Query: 60  KRKGSVEVTPNKKSRSGLGRGVAKKSADINECDEDNMDNTDTKSHSKSAXXXXXXXTASL 239
           K K SV+VTP+KK +SG G+GVA+K+ DI+E DED  D  D KS  K          AS 
Sbjct: 102 KSKNSVDVTPSKKLKSGSGKGVAQKAVDIDESDED--DVKDLKSPVKPGGKVRGGRGASK 159

Query: 240 APAGGRG 260
            PAGGRG
Sbjct: 160 GPAGGRG 166


>KJB75073.1 hypothetical protein B456_012G023000 [Gossypium raimondii]
          Length = 852

 Score = 62.0 bits (149), Expect = 1e-08
 Identities = 35/67 (52%), Positives = 42/67 (62%)
 Frame = +3

Query: 60  KRKGSVEVTPNKKSRSGLGRGVAKKSADINECDEDNMDNTDTKSHSKSAXXXXXXXTASL 239
           K K SV+VTP+KK +SG G+GVA+K+ DI+E DED  D  D KS  K          AS 
Sbjct: 102 KSKNSVDVTPSKKLKSGSGKGVAQKAVDIDESDED--DVKDLKSPVKPGGKVRGGRGASK 159

Query: 240 APAGGRG 260
            PAGGRG
Sbjct: 160 GPAGGRG 166


>XP_016714165.1 PREDICTED: replication factor C subunit 1 [Gossypium hirsutum]
          Length = 992

 Score = 62.0 bits (149), Expect = 1e-08
 Identities = 35/67 (52%), Positives = 42/67 (62%)
 Frame = +3

Query: 60  KRKGSVEVTPNKKSRSGLGRGVAKKSADINECDEDNMDNTDTKSHSKSAXXXXXXXTASL 239
           K K SV+VTP+KK +SG G+GVA+K+ DI+E DED  D  D KS  K          AS 
Sbjct: 102 KSKNSVDVTPSKKLKSGSGKGVAQKAVDIDESDED--DVKDLKSPVKPGGKVRGGRGASK 159

Query: 240 APAGGRG 260
            PAGGRG
Sbjct: 160 GPAGGRG 166


>XP_012459306.1 PREDICTED: replication factor C subunit 1 [Gossypium raimondii]
          Length = 992

 Score = 62.0 bits (149), Expect = 1e-08
 Identities = 35/67 (52%), Positives = 42/67 (62%)
 Frame = +3

Query: 60  KRKGSVEVTPNKKSRSGLGRGVAKKSADINECDEDNMDNTDTKSHSKSAXXXXXXXTASL 239
           K K SV+VTP+KK +SG G+GVA+K+ DI+E DED  D  D KS  K          AS 
Sbjct: 102 KSKNSVDVTPSKKLKSGSGKGVAQKAVDIDESDED--DVKDLKSPVKPGGKVRGGRGASK 159

Query: 240 APAGGRG 260
            PAGGRG
Sbjct: 160 GPAGGRG 166


>XP_018826530.1 PREDICTED: replication factor C subunit 1-like [Juglans regia]
           XP_018826531.1 PREDICTED: replication factor C subunit
           1-like [Juglans regia]
          Length = 960

 Score = 61.6 bits (148), Expect = 2e-08
 Identities = 33/73 (45%), Positives = 48/73 (65%)
 Frame = +3

Query: 42  FVLTNSKRKGSVEVTPNKKSRSGLGRGVAKKSADINECDEDNMDNTDTKSHSKSAXXXXX 221
           F+L +S RK  V+ TP+KK +SGLGRG+++K  D+ E DE++  +T+T+   KS      
Sbjct: 99  FILPSS-RKNLVDATPSKKLKSGLGRGISQKGVDVEESDEEDDKDTETQ---KSGGRGRG 154

Query: 222 XXTASLAPAGGRG 260
              +S APAGGRG
Sbjct: 155 RRGSSAAPAGGRG 167


>XP_017615387.1 PREDICTED: replication factor C subunit 1 [Gossypium arboreum]
          Length = 990

 Score = 61.2 bits (147), Expect = 3e-08
 Identities = 35/67 (52%), Positives = 42/67 (62%)
 Frame = +3

Query: 60  KRKGSVEVTPNKKSRSGLGRGVAKKSADINECDEDNMDNTDTKSHSKSAXXXXXXXTASL 239
           K K SV+VTP+KK +SG G+GVA+K+ DI+  DED  D  D KS  KS         AS 
Sbjct: 100 KSKNSVDVTPSKKLKSGSGKGVAQKAVDIDGSDED--DVKDLKSPVKSGGKVRGGRGASK 157

Query: 240 APAGGRG 260
            PAGGRG
Sbjct: 158 GPAGGRG 164


>XP_010248015.1 PREDICTED: replication factor C subunit 1 isoform X2 [Nelumbo
           nucifera]
          Length = 974

 Score = 59.7 bits (143), Expect = 9e-08
 Identities = 34/73 (46%), Positives = 45/73 (61%)
 Frame = +3

Query: 42  FVLTNSKRKGSVEVTPNKKSRSGLGRGVAKKSADINECDEDNMDNTDTKSHSKSAXXXXX 221
           FVL + K K S + TP KK +SG G+G+A+KS D +E DE+  D+   KS  K+A     
Sbjct: 112 FVLPSLK-KNSAKDTPTKKLKSGSGKGIAQKSVDSDESDEEVPDDKTVKSPFKAAGRGAG 170

Query: 222 XXTASLAPAGGRG 260
              A+ APAGGRG
Sbjct: 171 GRGAAAAPAGGRG 183


>XP_010248008.1 PREDICTED: replication factor C subunit 1 isoform X1 [Nelumbo
           nucifera]
          Length = 975

 Score = 59.7 bits (143), Expect = 9e-08
 Identities = 34/73 (46%), Positives = 45/73 (61%)
 Frame = +3

Query: 42  FVLTNSKRKGSVEVTPNKKSRSGLGRGVAKKSADINECDEDNMDNTDTKSHSKSAXXXXX 221
           FVL + K K S + TP KK +SG G+G+A+KS D +E DE+  D+   KS  K+A     
Sbjct: 113 FVLPSLK-KNSAKDTPTKKLKSGSGKGIAQKSVDSDESDEEVPDDKTVKSPFKAAGRGAG 171

Query: 222 XXTASLAPAGGRG 260
              A+ APAGGRG
Sbjct: 172 GRGAAAAPAGGRG 184


>OMO94457.1 hypothetical protein COLO4_16322 [Corchorus olitorius]
          Length = 916

 Score = 57.8 bits (138), Expect = 4e-07
 Identities = 34/67 (50%), Positives = 41/67 (61%)
 Frame = +3

Query: 60  KRKGSVEVTPNKKSRSGLGRGVAKKSADINECDEDNMDNTDTKSHSKSAXXXXXXXTASL 239
           K K SV+VTP+KK +SG GRGVA+K+ D  + DED  D  D +S  KS         AS 
Sbjct: 99  KSKNSVDVTPSKKLKSGSGRGVAQKAVDTVDSDED--DAKDLESPVKSGGRGRGGRGASG 156

Query: 240 APAGGRG 260
           APA GRG
Sbjct: 157 APAAGRG 163


>OMO75794.1 hypothetical protein CCACVL1_16037 [Corchorus capsularis]
          Length = 921

 Score = 57.8 bits (138), Expect = 4e-07
 Identities = 34/67 (50%), Positives = 41/67 (61%)
 Frame = +3

Query: 60  KRKGSVEVTPNKKSRSGLGRGVAKKSADINECDEDNMDNTDTKSHSKSAXXXXXXXTASL 239
           K K SV+VTP+KK +SG GRGVA+K+ D  + DED  D  D +S  KS         AS 
Sbjct: 99  KSKNSVDVTPSKKLKSGSGRGVAQKAVDTVDSDED--DAKDLESPVKSGGRGRGGRGASG 156

Query: 240 APAGGRG 260
           APA GRG
Sbjct: 157 APAAGRG 163


>XP_017985217.1 PREDICTED: replication factor C subunit 1 [Theobroma cacao]
           XP_017985218.1 PREDICTED: replication factor C subunit 1
           [Theobroma cacao] XP_017985219.1 PREDICTED: replication
           factor C subunit 1 [Theobroma cacao]
          Length = 957

 Score = 57.4 bits (137), Expect = 6e-07
 Identities = 34/68 (50%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
 Frame = +3

Query: 60  KRKGSVEVTPNKKSRSGLGRGVAKKSADINECDEDNMDNTDTKSHSKSAXXXXXXXT-AS 236
           K + +V+VTP+KK +SG GRGVA+K+ D +E DED  D  D +S  KS        T AS
Sbjct: 100 KSRNTVDVTPSKKRKSGSGRGVAQKAEDNDESDED--DAKDLESPVKSGGRGGRGGTGAS 157

Query: 237 LAPAGGRG 260
           +APA GRG
Sbjct: 158 VAPASGRG 165


>EOY19345.1 Replication factor C subunit 1 [Theobroma cacao]
          Length = 1012

 Score = 57.4 bits (137), Expect = 6e-07
 Identities = 34/68 (50%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
 Frame = +3

Query: 60  KRKGSVEVTPNKKSRSGLGRGVAKKSADINECDEDNMDNTDTKSHSKSAXXXXXXXT-AS 236
           K + +V+VTP+KK +SG GRGVA+K+ D +E DED  D  D +S  KS        T AS
Sbjct: 100 KSRNTVDVTPSKKRKSGSGRGVAQKAEDNDESDED--DAKDLESPVKSGGRGGRGGTGAS 157

Query: 237 LAPAGGRG 260
           +APA GRG
Sbjct: 158 VAPASGRG 165


>CDP15576.1 unnamed protein product [Coffea canephora]
          Length = 1020

 Score = 57.0 bits (136), Expect = 8e-07
 Identities = 30/60 (50%), Positives = 38/60 (63%)
 Frame = +3

Query: 84  TPNKKSRSGLGRGVAKKSADINECDEDNMDNTDTKSHSKSAXXXXXXXTASLAPAGGRGM 263
           TP+KK +SG GRG+A+KSAD++E DED  D   TKSHSK A       +   AP   +GM
Sbjct: 113 TPSKKLKSGSGRGIARKSADVDESDED--DVIGTKSHSKPAGRGRGGKSGITAPGSRKGM 170


>KCW50954.1 hypothetical protein EUGRSUZ_J00591 [Eucalyptus grandis]
          Length = 899

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 32/61 (52%), Positives = 37/61 (60%)
 Frame = +3

Query: 78  EVTPNKKSRSGLGRGVAKKSADINECDEDNMDNTDTKSHSKSAXXXXXXXTASLAPAGGR 257
           +VTP+KK +SG GRGV KK  DI E D+D  D+   KS  KS         AS APAGGR
Sbjct: 120 DVTPSKKLKSGSGRGVPKKPVDIEESDDD--DHKCAKSPPKSGGRGRGGRGASAAPAGGR 177

Query: 258 G 260
           G
Sbjct: 178 G 178


>XP_010031591.1 PREDICTED: replication factor C subunit 1 [Eucalyptus grandis]
           KCW50953.1 hypothetical protein EUGRSUZ_J00591
           [Eucalyptus grandis]
          Length = 966

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 32/61 (52%), Positives = 37/61 (60%)
 Frame = +3

Query: 78  EVTPNKKSRSGLGRGVAKKSADINECDEDNMDNTDTKSHSKSAXXXXXXXTASLAPAGGR 257
           +VTP+KK +SG GRGV KK  DI E D+D  D+   KS  KS         AS APAGGR
Sbjct: 120 DVTPSKKLKSGSGRGVPKKPVDIEESDDD--DHKCAKSPPKSGGRGRGGRGASAAPAGGR 177

Query: 258 G 260
           G
Sbjct: 178 G 178


>XP_010681144.1 PREDICTED: replication factor C subunit 1 [Beta vulgaris subsp.
           vulgaris] XP_010681145.1 PREDICTED: replication factor C
           subunit 1 [Beta vulgaris subsp. vulgaris] XP_019105805.1
           PREDICTED: replication factor C subunit 1 [Beta vulgaris
           subsp. vulgaris] KMT08722.1 hypothetical protein
           BVRB_6g139950 [Beta vulgaris subsp. vulgaris]
          Length = 976

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 28/68 (41%), Positives = 39/68 (57%)
 Frame = +3

Query: 57  SKRKGSVEVTPNKKSRSGLGRGVAKKSADINECDEDNMDNTDTKSHSKSAXXXXXXXTAS 236
           S +K S E TP+K+ +   GRG+AKK  D  E DE+  ++ +T++  KSA       TAS
Sbjct: 114 STKKKSAEATPSKRLKGNSGRGIAKKEVDAEESDEEMDEDKETQTPVKSAGRGRGRGTAS 173

Query: 237 LAPAGGRG 260
            A   GRG
Sbjct: 174 AAAPSGRG 181