BLASTX nr result

ID: Panax24_contig00028972 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00028972
         (467 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KZM81339.1 hypothetical protein DCAR_028952 [Daucus carota subsp...    55   2e-06
XP_004138827.2 PREDICTED: phosphoribosylaminoimidazole carboxyla...    56   3e-06
XP_017223819.1 PREDICTED: phosphoribosylaminoimidazole carboxyla...    55   5e-06
XP_017235785.1 PREDICTED: phosphoribosylaminoimidazole carboxyla...    55   5e-06
KZN09208.1 hypothetical protein DCAR_001864 [Daucus carota subsp...    55   5e-06
XP_010102266.1 Phosphoribosylaminoimidazole carboxylase [Morus n...    55   8e-06
XP_004299242.2 PREDICTED: phosphoribosylaminoimidazole carboxyla...    55   8e-06
XP_011464252.1 PREDICTED: phosphoribosylaminoimidazole carboxyla...    55   8e-06
XP_007030499.2 PREDICTED: phosphoribosylaminoimidazole carboxyla...    55   9e-06

>KZM81339.1 hypothetical protein DCAR_028952 [Daucus carota subsp. sativus]
          Length = 219

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 26/37 (70%), Positives = 30/37 (81%)
 Frame = -1

Query: 392 ETVHGMLETIVGVLGGGQLGRMLCQAASRKGI*ICYL 282
           E VHG+ ET+VGVLGGGQLGRMLCQAAS+  I +  L
Sbjct: 17  EAVHGLSETVVGVLGGGQLGRMLCQAASQMAIKVVIL 53


>XP_004138827.2 PREDICTED: phosphoribosylaminoimidazole carboxylase, chloroplastic
           [Cucumis sativus] KGN63071.1 hypothetical protein
           Csa_2G401310 [Cucumis sativus]
          Length = 641

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 41/88 (46%), Positives = 47/88 (53%), Gaps = 17/88 (19%)
 Frame = -1

Query: 461 ISCYNNLNFLE--ESSP*KNPLVR-------TET--------VHGMLETIVGVLGGGQLG 333
           I CY+  + L+     P KNP +        TET        VHG+ E IVGVLGGGQLG
Sbjct: 45  IPCYSFPSLLKMAHQPPRKNPALHCSASLHSTETLPRKDEIAVHGVSEKIVGVLGGGQLG 104

Query: 332 RMLCQAASRKGI*ICYLKHSIC*PLFRC 249
           RMLCQAAS+  I     K SI  PL  C
Sbjct: 105 RMLCQAASKLSI-----KISILDPLVNC 127


>XP_017223819.1 PREDICTED: phosphoribosylaminoimidazole carboxylase, chloroplastic
           [Daucus carota subsp. sativus]
          Length = 634

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 26/37 (70%), Positives = 30/37 (81%)
 Frame = -1

Query: 392 ETVHGMLETIVGVLGGGQLGRMLCQAASRKGI*ICYL 282
           E VHG+ ET+VGVLGGGQLGRMLCQAAS+  I +  L
Sbjct: 73  EAVHGLSETVVGVLGGGQLGRMLCQAASQMAIKVVIL 109


>XP_017235785.1 PREDICTED: phosphoribosylaminoimidazole carboxylase,
           chloroplastic-like [Daucus carota subsp. sativus]
          Length = 659

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 26/37 (70%), Positives = 30/37 (81%)
 Frame = -1

Query: 392 ETVHGMLETIVGVLGGGQLGRMLCQAASRKGI*ICYL 282
           E VHG+ ET+VGVLGGGQLGRMLCQAAS+  I +  L
Sbjct: 98  EAVHGLSETVVGVLGGGQLGRMLCQAASQMAIKVVIL 134


>KZN09208.1 hypothetical protein DCAR_001864 [Daucus carota subsp. sativus]
          Length = 696

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 26/37 (70%), Positives = 30/37 (81%)
 Frame = -1

Query: 392 ETVHGMLETIVGVLGGGQLGRMLCQAASRKGI*ICYL 282
           E VHG+ ET+VGVLGGGQLGRMLCQAAS+  I +  L
Sbjct: 98  EAVHGLSETVVGVLGGGQLGRMLCQAASQMAIKVVIL 134


>XP_010102266.1 Phosphoribosylaminoimidazole carboxylase [Morus notabilis]
           EXB93209.1 Phosphoribosylaminoimidazole carboxylase
           [Morus notabilis]
          Length = 614

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 26/35 (74%), Positives = 29/35 (82%)
 Frame = -1

Query: 386 VHGMLETIVGVLGGGQLGRMLCQAASRKGI*ICYL 282
           VHG+ ETIVGVLGGGQLGRMLCQAAS+  I +  L
Sbjct: 92  VHGLFETIVGVLGGGQLGRMLCQAASQMAIKVVVL 126


>XP_004299242.2 PREDICTED: phosphoribosylaminoimidazole carboxylase, chloroplastic
           isoform X2 [Fragaria vesca subsp. vesca]
          Length = 633

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 28/46 (60%), Positives = 32/46 (69%)
 Frame = -1

Query: 419 P*KNPLVRTETVHGMLETIVGVLGGGQLGRMLCQAASRKGI*ICYL 282
           P   P  +   VHG+ ETIVGVLGGGQLGRMLCQAAS+  I +  L
Sbjct: 63  PHVTPPSKDGAVHGLSETIVGVLGGGQLGRMLCQAASQMAIKVMVL 108


>XP_011464252.1 PREDICTED: phosphoribosylaminoimidazole carboxylase, chloroplastic
           isoform X1 [Fragaria vesca subsp. vesca]
          Length = 635

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 28/46 (60%), Positives = 32/46 (69%)
 Frame = -1

Query: 419 P*KNPLVRTETVHGMLETIVGVLGGGQLGRMLCQAASRKGI*ICYL 282
           P   P  +   VHG+ ETIVGVLGGGQLGRMLCQAAS+  I +  L
Sbjct: 63  PHVTPPSKDGAVHGLSETIVGVLGGGQLGRMLCQAASQMAIKVMVL 108


>XP_007030499.2 PREDICTED: phosphoribosylaminoimidazole carboxylase, chloroplastic
           [Theobroma cacao]
          Length = 653

 Score = 54.7 bits (130), Expect = 9e-06
 Identities = 27/38 (71%), Positives = 30/38 (78%)
 Frame = -1

Query: 386 VHGMLETIVGVLGGGQLGRMLCQAASRKGI*ICYLKHS 273
           VHG+ ETIVGVLGGGQLGRMLCQAAS+  I +  L  S
Sbjct: 94  VHGLSETIVGVLGGGQLGRMLCQAASKMAIKVMVLDPS 131


Top