BLASTX nr result

ID: Panax24_contig00028705 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00028705
         (464 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KDP25042.1 hypothetical protein JCGZ_22577 [Jatropha curcas]           67   5e-10
XP_012087452.1 PREDICTED: uncharacterized protein LOC105646246 [...    66   1e-09
KVI05798.1 Helicase Sen1, N-terminal [Cynara cardunculus var. sc...    57   2e-06
OAY48715.1 hypothetical protein MANES_06G179400 [Manihot esculen...    55   7e-06

>KDP25042.1 hypothetical protein JCGZ_22577 [Jatropha curcas]
          Length = 2752

 Score = 67.0 bits (162), Expect = 5e-10
 Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 25/173 (14%)
 Frame = +3

Query: 21   KANRRKGKSEHGVSAKKDLGPVVMDSSVNKTSKEVKSIIAGQITGN-------------- 158
            + ++RK +++H +       P V  S  N+TSK VK  ++ +   N              
Sbjct: 2557 QGSKRKARADHDL-------PPVHASDENRTSKNVKCAVSREYVRNSESKCNYRSEKKQD 2609

Query: 159  -----KNRGKMSC-----EKKLEVGNSNMGDGNRDAN-DEARASNQLGNPKDAISKRKQQ 305
                 K + K +C     ++ LE+  S+ G  N+    ++ R SN+LG  +D I+KRK+Q
Sbjct: 2610 FKDPHKGKKKDTCMNSKSDRNLEISTSSAGGNNKGGEINDGRISNELGASEDIITKRKRQ 2669

Query: 306  RDAVDXXXXXXXXXXXXXXXXXXXXXXXRSISPTNTTRRSIKPPNQRKG*VIC 464
            R+AVD                       +S+SPT+     I+PP +RKG + C
Sbjct: 2670 REAVDAILCSSLISSKKPESSTRPVPTKKSLSPTSIATNGIRPPKKRKGKLPC 2722


>XP_012087452.1 PREDICTED: uncharacterized protein LOC105646246 [Jatropha curcas]
          Length = 2797

 Score = 65.9 bits (159), Expect = 1e-09
 Identities = 46/169 (27%), Positives = 76/169 (44%), Gaps = 25/169 (14%)
 Frame = +3

Query: 21   KANRRKGKSEHGVSAKKDLGPVVMDSSVNKTSKEVKSIIAGQITGN-------------- 158
            + ++RK +++H +       P V  S  N+TSK VK  ++ +   N              
Sbjct: 2625 QGSKRKARADHDL-------PPVHASDENRTSKNVKCAVSREYVRNSESKCNYRSEKKQD 2677

Query: 159  -----KNRGKMSC-----EKKLEVGNSNMGDGNRDAN-DEARASNQLGNPKDAISKRKQQ 305
                 K + K +C     ++ LE+  S+ G  N+    ++ R SN+LG  +D I+KRK+Q
Sbjct: 2678 FKDPHKGKKKDTCMNSKSDRNLEISTSSAGGNNKGGEINDGRISNELGASEDIITKRKRQ 2737

Query: 306  RDAVDXXXXXXXXXXXXXXXXXXXXXXXRSISPTNTTRRSIKPPNQRKG 452
            R+AVD                       +S+SPT+     I+PP +RKG
Sbjct: 2738 REAVDAILCSSLISSKKPESSTRPVPTKKSLSPTSIATNGIRPPKKRKG 2786


>KVI05798.1 Helicase Sen1, N-terminal [Cynara cardunculus var. scolymus]
          Length = 2083

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 47/153 (30%), Positives = 67/153 (43%), Gaps = 4/153 (2%)
 Frame = +3

Query: 6    LMEADKANRRKGKSEHGVSAKKDLGPVVMDSSVNKTSKEVK-SIIAGQITGNKNRGKMSC 182
            + + DK  +R  K  +  SAKK    V  +SSVNKT K+VK +    + T   + GK   
Sbjct: 1910 IRDNDKTKKR-AKKHYDSSAKKSTECVYTESSVNKTLKDVKLATDEHRETHAGSWGKKGV 1968

Query: 183  EKKL---EVGNSNMGDGNRDANDEARASNQLGNPKDAISKRKQQRDAVDXXXXXXXXXXX 353
            E++     V      +      + +R+S Q+  P D+I KRKQQR+AVD           
Sbjct: 1969 ERQRFDRNVAGDKPLNETIQREEGSRSSGQVEKPMDSICKRKQQREAVDALLPSAFISSK 2028

Query: 354  XXXXXXXXXXXXRSISPTNTTRRSIKPPNQRKG 452
                        RS  P   +  +IKP   RKG
Sbjct: 2029 KPESKLKSVPDRRSRPPVRPSDHAIKPAKTRKG 2061


>OAY48715.1 hypothetical protein MANES_06G179400 [Manihot esculenta] OAY48716.1
            hypothetical protein MANES_06G179400 [Manihot esculenta]
          Length = 2325

 Score = 55.1 bits (131), Expect = 7e-06
 Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
 Frame = +3

Query: 183  EKKLEVGNSNMGDGNRDAN-DEARASNQLGNPKDAISKRKQQRDAVDXXXXXXXXXXXXX 359
            +K+LE+  S  G G + +  D  R  NQ+G  +D I+KRKQQR+AVD             
Sbjct: 2224 DKELEISTSLAGTGIKGSECDVGRTPNQIGASEDLITKRKQQREAVDAILYSSLISSKKS 2283

Query: 360  XXXXXXXXXXRSISPTNTTRRSIKPPNQRKG 452
                      R +SPT+     I+PP  RKG
Sbjct: 2284 ESSMKPVPAKRPLSPTSIVSSGIRPPKTRKG 2314


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