BLASTX nr result

ID: Panax24_contig00028643 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00028643
         (452 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_015582652.1 PREDICTED: non-functional pseudokinase ZED1 [Rici...    54   9e-06

>XP_015582652.1 PREDICTED: non-functional pseudokinase ZED1 [Ricinus communis]
          Length = 372

 Score = 54.3 bits (129), Expect = 9e-06
 Identities = 41/116 (35%), Positives = 59/116 (50%), Gaps = 6/116 (5%)
 Frame = -1

Query: 449 SENFVVYSFRIFLLQLFTGDEPFGMVGNVKMPH------LVDRVKNFVDKDQFYKILYHN 288
           +E+  VY+F +FLL L TG +    V +   P       LVD VK F+  D+FY+ +   
Sbjct: 236 NESQDVYNFGVFLLMLLTGQK----VVDSYRPQAGEELGLVDHVKKFIADDRFYETVDSI 291

Query: 287 LLGEEGGIEKEDHFQTRLAVALSCSQEK*EDKPEMIGLKNSGELRGILILFSSIKT 120
           +LGE    EK+   Q    ++  C  E  ED+P MI +  + ELR +    SSI T
Sbjct: 292 ILGEGSLPEKDQQLQAFTLLSFRCISEADEDRPMMIDV--AKELRKMYKCSSSIST 345


Top