BLASTX nr result
ID: Panax24_contig00028601
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax24_contig00028601
(567 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_015056787.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 88 8e-17
XP_018632617.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 87 2e-16
XP_009802889.1 PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA ... 86 4e-16
XP_016454834.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 86 5e-16
XP_018632619.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 86 5e-16
XP_018632614.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 86 5e-16
XP_018632606.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 86 5e-16
XP_018632625.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 85 1e-15
XP_019225778.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 84 2e-15
XP_018632612.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 82 8e-15
XP_016447890.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 82 1e-14
XP_019225779.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 82 1e-14
XP_019066486.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 82 1e-14
XP_018632616.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 80 3e-14
XP_016557263.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 80 5e-14
XP_018632629.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 79 7e-14
XP_012836426.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 79 1e-13
XP_017225052.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 78 2e-13
XP_018632623.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 78 2e-13
XP_017257953.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 78 2e-13
>XP_015056787.1 PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Solanum
pennellii] XP_015056795.1 PREDICTED: DNA-directed RNA
polymerase V subunit 1-like [Solanum pennellii]
Length = 2044
Score = 87.8 bits (216), Expect = 8e-17
Identities = 65/221 (29%), Positives = 98/221 (44%), Gaps = 38/221 (17%)
Frame = +2
Query: 14 SSTVGG--WGKRSEEDAGDGWSKVERSGDKAQQSGWGKKADE---ADWNKKDMQPLPDQA 178
+ T GG WGK++E DAG W K G+ S WGKK + + W +K P+
Sbjct: 1470 AETDGGSSWGKKAETDAGSSWGK---KGETDGGSSWGKKGETDGGSSWGEK-----PETD 1521
Query: 179 GLLNSSTDVVWGEKSEDDSANGWGTKADKAVDTRWNKKD-------SQSLSDQDYP---- 325
G SS WG+K+E D + WG K DK + W KK + + +++P
Sbjct: 1522 G--GSS----WGKKAETDGGSSWGKKVDKDGGSSWGKKVDKDGASWGKKVESENFPQLSG 1575
Query: 326 -----SSTANWSKRSVEDSEDAWGKKAKNSGNDAQQSG---------PWLPKKVDGAAET 463
S ++W K+ +D +WGKK + QSG W + DG +
Sbjct: 1576 KEEQSGSWSSWGKQVEKDGGSSWGKKVDEPEKNLHQSGNGEQSGFVSSWGKVEKDGGS-- 1633
Query: 464 PWNK-----NNSRPSTAGIL---GERLEEDSGDGWGKKVER 562
W K + + +G L G+++E D G WGKKV++
Sbjct: 1634 -WGKKIESHQSGKGEESGSLSSWGKKVETDGGSSWGKKVDK 1673
Score = 84.7 bits (208), Expect = 1e-15
Identities = 58/200 (29%), Positives = 89/200 (44%), Gaps = 24/200 (12%)
Frame = +2
Query: 32 WGKRSEEDAGDGWSKVERSGDKAQQSGWGKKADE---ADWNKKDMQPLPDQAGLLNSSTD 202
WGK++E D G W K G+ S WGKK + + W KK A + S+
Sbjct: 1418 WGKKAETDGGSSWGK---KGETDGGSSWGKKGETDGGSSWGKK--------AEMDGGSS- 1465
Query: 203 VVWGEKSEDDSANGWGTKADKAVDTRWNKK----DSQSLSDQDYPSSTANWSKRSVEDSE 370
WG+K+E D + WG KA+ + W KK S + ++W ++ D
Sbjct: 1466 --WGKKAETDGGSSWGKKAETDAGSSWGKKGETDGGSSWGKKGETDGGSSWGEKPETDGG 1523
Query: 371 DAWGKKAKNSGNDA------QQSGPWLPKKV--DGAAETPWNKNNSRPSTAG-------- 502
+WGKKA+ G + + G KKV DGA+ ++ + P +G
Sbjct: 1524 SSWGKKAETDGGSSWGKKVDKDGGSSWGKKVDKDGASWGKKVESENFPQLSGKEEQSGSW 1583
Query: 503 -ILGERLEEDSGDGWGKKVE 559
G+++E+D G WGKKV+
Sbjct: 1584 SSWGKQVEKDGGSSWGKKVD 1603
Score = 75.9 bits (185), Expect = 1e-12
Identities = 61/214 (28%), Positives = 90/214 (42%), Gaps = 30/214 (14%)
Frame = +2
Query: 14 SSTVGGWGKRSEEDAGDGWSK--------VERSGDKAQQ---SGWGK-KADEADWNKK-- 151
S + WGK+ E+D G W K + +SG+ Q S WGK + D W KK
Sbjct: 1580 SGSWSSWGKQVEKDGGSSWGKKVDEPEKNLHQSGNGEQSGFVSSWGKVEKDGGSWGKKIE 1639
Query: 152 -DMQPLPDQAGLLNSSTDVVWGEKSEDDSANGWGTKADKAVDT----------RWNKK-- 292
+++G L+S WG+K E D + WG K DK + W KK
Sbjct: 1640 SHQSGKGEESGSLSS-----WGKKVETDGGSSWGKKVDKDSSSWGKKVDKDGGSWGKKIE 1694
Query: 293 --DSQSLSDQDYPS-STANWSKRSVEDSEDAWGKKAKNSGNDAQQSGPWLPKKVDGAAET 463
++ LS ++ S S ++W K+ +D +WGKK N+ QQSG G
Sbjct: 1695 TENTPQLSGKEEQSGSLSSWGKKVEKDGGSSWGKKVDEPENNTQQSG-------SGEQSG 1747
Query: 464 PWNKNNSRPSTAGILGERLEEDSGDGWGKKVERS 565
W+ G+++E+D G G K S
Sbjct: 1748 SWSS----------WGKKVEKDGGSWDGPKQSNS 1771
Score = 75.5 bits (184), Expect = 2e-12
Identities = 53/186 (28%), Positives = 79/186 (42%), Gaps = 10/186 (5%)
Frame = +2
Query: 32 WGKRSEED--AGDGWSKVERSGDKAQQ--------SGWGKKADEADWNKKDMQPLPDQAG 181
W K S +G W ++ + A++ S WGKK D ++ P Q+G
Sbjct: 1324 WEKASSGSVKSGGSWDMAGKTQNGAEEGVNQSDSWSAWGKKVDGSN---------PQQSG 1374
Query: 182 LLNSSTDVVWGEKSEDDSANGWGTKADKAVDTRWNKKDSQSLSDQDYPSSTANWSKRSVE 361
+ S WG+K E D + WG K + V + W KK ++ D SS W K++
Sbjct: 1375 VTEQSES--WGKKGETDGGSSWGKKGETDVGSSWGKK-----AEMDGGSS---WGKKAET 1424
Query: 362 DSEDAWGKKAKNSGNDAQQSGPWLPKKVDGAAETPWNKNNSRPSTAGILGERLEEDSGDG 541
D +WGKK + G + W KK + + W K + G++ E D G
Sbjct: 1425 DGGSSWGKKGETDGGSS-----W-GKKGETDGGSSWGK-KAEMDGGSSWGKKAETDGGSS 1477
Query: 542 WGKKVE 559
WGKK E
Sbjct: 1478 WGKKAE 1483
Score = 68.2 bits (165), Expect = 5e-10
Identities = 58/200 (29%), Positives = 84/200 (42%), Gaps = 23/200 (11%)
Frame = +2
Query: 14 SSTVGGWGKRSEEDAGDGWSKVERSGDKAQQSGWGKKADE--ADWNKK-------DMQPL 166
S ++ WGK+ E D G W K DK S WGKK D+ W KK +
Sbjct: 1649 SGSLSSWGKKVETDGGSSWGK---KVDK-DSSSWGKKVDKDGGSWGKKIETENTPQLSGK 1704
Query: 167 PDQAGLLNSSTDVVWGEKSEDDSANGWGTKADKAVDTRWNKKDSQSLSDQDYPSSTANWS 346
+Q+G L+S WG+K E D + WG K D+ + ++Q + S ++W
Sbjct: 1705 EEQSGSLSS-----WGKKVEKDGGSSWGKKVDEP------ENNTQQSGSGEQSGSWSSWG 1753
Query: 347 KRSVED-----------SEDAWGKKAKNSG-NDAQQSGPWLPKKVDGAAETPWNKNNSRP 490
K+ +D SE +WGK G A G K++D + W+ + SR
Sbjct: 1754 KKVEKDGGSWDGPKQSNSESSWGKAPNGGGLGSATAEG---NKRLDQSV-NDWSSSVSRD 1809
Query: 491 STAGILGERLEEDS--GDGW 544
G L E +DS GW
Sbjct: 1810 ---GQLNEPTHDDSTKNGGW 1826
Score = 58.9 bits (141), Expect = 8e-07
Identities = 41/182 (22%), Positives = 71/182 (39%), Gaps = 9/182 (4%)
Frame = +2
Query: 41 RSEEDAGDGWSKVERSGDKAQQSGWGKKADEADWNKKDMQPLPDQAGLLNSSTDVVWGEK 220
R+E D + + + SG +++ G W+ + G+ S + WG+K
Sbjct: 1305 RAEFDYNENLDEGKPSGSAWEKASSGSVKSGGSWDMAGKTQNGAEEGVNQSDSWSAWGKK 1364
Query: 221 SE---------DDSANGWGTKADKAVDTRWNKKDSQSLSDQDYPSSTANWSKRSVEDSED 373
+ + + WG K + + W KK + ++W K++ D
Sbjct: 1365 VDGSNPQQSGVTEQSESWGKKGETDGGSSWGKKGETDVG--------SSWGKKAEMDGGS 1416
Query: 374 AWGKKAKNSGNDAQQSGPWLPKKVDGAAETPWNKNNSRPSTAGILGERLEEDSGDGWGKK 553
+WGKKA+ G + W KK + + W K + G++ E D G WGKK
Sbjct: 1417 SWGKKAETDGGSS-----W-GKKGETDGGSSWGKKGETDGGSS-WGKKAEMDGGSSWGKK 1469
Query: 554 VE 559
E
Sbjct: 1470 AE 1471
>XP_018632617.1 PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X5
[Nicotiana tomentosiformis]
Length = 2002
Score = 87.0 bits (214), Expect = 2e-16
Identities = 58/202 (28%), Positives = 93/202 (46%), Gaps = 19/202 (9%)
Frame = +2
Query: 14 SSTVGGWGKRSEEDAGDGWSKVERSGDKAQQSGWGKKADE-ADWNKKDMQPLPDQAGLLN 190
S ++ WGK+ E+D G +VE + + QSG +K+ + W KK + G +
Sbjct: 1491 SGSLSSWGKKVEKDGGSWGKRVEETENHNHQSGKDEKSGSLSSWGKKVEKDGDSSWGKVE 1550
Query: 191 SSTDVVWGEKSEDDSANGWGTKADKAVDTRWNKK------DSQSLSDQDYPSSTANWSKR 352
WG+K E D + WG K +K + W KK SQ ++ S ++W K+
Sbjct: 1551 IDGGSSWGKKVEKDGVSSWGKKVEKDGGS-WGKKVEQAEIHSQQSGKEEKSESLSSWGKQ 1609
Query: 353 SVEDSEDAWGKKAKNSGNDAQQSGPWLPKKVDGAAETPWN-----KNNSRPSTAG----- 502
+D +WGK+ ++ G W KKV+ + W +N RPS G
Sbjct: 1610 VEKDGGSSWGKQ-------VEKGGSW-GKKVEKDGGSSWGEKVEAENTPRPSGKGEQSGS 1661
Query: 503 --ILGERLEEDSGDGWGKKVER 562
G++++ED G WG+KVE+
Sbjct: 1662 WSSWGKQVKEDGGASWGEKVEK 1683
Score = 74.7 bits (182), Expect = 3e-12
Identities = 54/183 (29%), Positives = 83/183 (45%), Gaps = 2/183 (1%)
Frame = +2
Query: 23 VGGWGKRSEEDAGDGWSKVERSGDKAQQSGWGKKADE-ADWNKKDMQPLPDQAGLLNSST 199
V WGK+ E+D G KVE++ +QQSG +K++ + W K+ + G
Sbjct: 1566 VSSWGKKVEKDGGSWGKKVEQAEIHSQQSGKEEKSESLSSWGKQVEKDGGSSWG-KQVEK 1624
Query: 200 DVVWGEKSEDDSANGWGTKADKAVDTRWNKKDSQSLSDQDYPSSTANWSKRSVEDSEDAW 379
WG+K E D + WG K + R + K QS S ++W K+ ED +W
Sbjct: 1625 GGSWGKKVEKDGGSSWGEKVEAENTPRPSGKGEQS-------GSWSSWGKQVKEDGGASW 1677
Query: 380 GKKAKNSGNDAQQSGPWLPKKVDGAAETPWNK-NNSRPSTAGILGERLEEDSGDGWGKKV 556
G+K + G + W KKVD + P N +P + G+++E+D G G K
Sbjct: 1678 GEKVEKDGGSS-----W-GKKVDEPEDKPHQSGNGEQPGSWSSWGKKVEKDGGSWDGPKQ 1731
Query: 557 ERS 565
S
Sbjct: 1732 SNS 1734
Score = 68.6 bits (166), Expect = 4e-10
Identities = 44/154 (28%), Positives = 69/154 (44%), Gaps = 24/154 (15%)
Frame = +2
Query: 14 SSTVGGWGKRSEEDAGDGWSK-VERSGDKAQQSGWGKKADE---ADWNKK---DMQPLPD 172
S ++ WGK+ E+D G W K VE+ G WGKK ++ + W +K + P P
Sbjct: 1600 SESLSSWGKQVEKDGGSSWGKQVEKGGS------WGKKVEKDGGSSWGEKVEAENTPRPS 1653
Query: 173 QAGLLNSSTDVVWGEKSEDDSANGWGTKADKAVDTRWNKKDSQ------SLSDQDYPSST 334
G + S WG++ ++D WG K +K + W KK + + + P S
Sbjct: 1654 GKGEQSGSWSS-WGKQVKEDGGASWGEKVEKDGGSSWGKKVDEPEDKPHQSGNGEQPGSW 1712
Query: 335 ANWSKRSVED-----------SEDAWGKKAKNSG 403
++W K+ +D SE +WGK K G
Sbjct: 1713 SSWGKKVEKDGGSWDGPKQSNSESSWGKTTKGGG 1746
Score = 65.1 bits (157), Expect = 6e-09
Identities = 58/206 (28%), Positives = 93/206 (45%), Gaps = 29/206 (14%)
Frame = +2
Query: 32 WGKRSEED--AGDGW--SKVERSGDKAQQ-----SGWGKKADEADWNKKDMQPLPDQAG- 181
W K S E+ +G W +K + +KA S WG+K DEA+ N P Q+G
Sbjct: 1383 WEKASSENVKSGGSWDMAKTQNGAEKAVNQSDSWSSWGRKVDEAENN-------PRQSGN 1435
Query: 182 --LLNSSTDVVWGEKSEDDSANGW--GTKADKAVDTRWNKK------DSQSLSDQDYPSS 331
L S + WG K+++ +N G A + W KK + +++ S
Sbjct: 1436 GEQLESWS--AWGGKAKEVDSNPQQSGNTAQSGSWSAWGKKVDEAGNSPRQSGNEEQSGS 1493
Query: 332 TANWSKRSVEDSEDAWGKKAKNSGNDAQQSG---------PWLPKKVDGAAETPWNKNNS 484
++W K+ VE +WGK+ + + N QSG W KKV+ ++ W K
Sbjct: 1494 LSSWGKK-VEKDGGSWGKRVEETENHNHQSGKDEKSGSLSSW-GKKVEKDGDSSWGKVEI 1551
Query: 485 RPSTAGILGERLEEDSGDGWGKKVER 562
++ G+++E+D WGKKVE+
Sbjct: 1552 DGGSS--WGKKVEKDGVSSWGKKVEK 1575
>XP_009802889.1 PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase V subunit
1 [Nicotiana sylvestris]
Length = 2055
Score = 85.9 bits (211), Expect = 4e-16
Identities = 58/198 (29%), Positives = 92/198 (46%), Gaps = 16/198 (8%)
Frame = +2
Query: 14 SSTVGGWGKRSEEDAGDGWSKVERSGDKAQQSGWGKKADE-ADWNKKDMQPLPDQAGLLN 190
S ++ WGK+ E+D G KVE QSG +K+ + W KK +
Sbjct: 1433 SGSLSSWGKKVEKDTGSWGKKVEEMESHNPQSGKDEKSGSLSSWGKK-----------VE 1481
Query: 191 SSTDVVWGEKSEDDSANGWGTKADKAVDTRWNKK--DSQSLSDQ----DYPSSTANWSKR 352
D WG+K E D + WG K + + W KK ++++ S Q + S ++W K+
Sbjct: 1482 KDGDSSWGKKVEIDGGSSWGKKVEIDGGSSWGKKVEEAENYSHQSGKEEKSESLSSWGKK 1541
Query: 353 SVEDSEDAWGKKAKNSGNDA------QQSGPWLPKKVDGA---AETPWNKNNSRPSTAGI 505
+D +WGKK +N G + + G W KKV+ A + W + S ++
Sbjct: 1542 VEKDGVSSWGKKVENDGVSSWGKKVEKDGGSW-GKKVEQAENHSHQSWKEEKSESLSS-- 1598
Query: 506 LGERLEEDSGDGWGKKVE 559
G+++E+D WGKKVE
Sbjct: 1599 WGKKVEKDGVSSWGKKVE 1616
Score = 81.3 bits (199), Expect = 2e-14
Identities = 61/215 (28%), Positives = 96/215 (44%), Gaps = 33/215 (15%)
Frame = +2
Query: 14 SSTVGGWGKRSEEDAGDGWSK-VERSGDKAQQSGWGKKAD---EADWNKK--DMQPLPDQ 175
S ++ WGK+ E+D W K VE G S WGKK + + W KK + + Q
Sbjct: 1470 SGSLSSWGKKVEKDGDSSWGKKVEIDGG----SSWGKKVEIDGGSSWGKKVEEAENYSHQ 1525
Query: 176 AGLLNSSTDVV-WGEKSEDDSANGWGTKADKAVDTRWNKK-------------DSQSLSD 313
+G S + WG+K E D + WG K + + W KK +++ S
Sbjct: 1526 SGKEEKSESLSSWGKKVEKDGVSSWGKKVENDGVSSWGKKVEKDGGSWGKKVEQAENHSH 1585
Query: 314 QDY----PSSTANWSKRSVEDSEDAWGKKAKNSGNDA------QQSGPWLPKKVDGA--- 454
Q + S ++W K+ +D +WGKK +N G + + G W KKV+ A
Sbjct: 1586 QSWKEEKSESLSSWGKKVEKDGVSSWGKKVENDGVSSWGKKVEKDGGSW-GKKVEQAENH 1644
Query: 455 AETPWNKNNSRPSTAGILGERLEEDSGDGWGKKVE 559
+ W + S ++ G+++E+D WGKK E
Sbjct: 1645 SHQSWKEEKSESLSS--WGKKVEKDGVSSWGKKGE 1677
Score = 78.6 bits (192), Expect = 1e-13
Identities = 54/202 (26%), Positives = 84/202 (41%), Gaps = 19/202 (9%)
Frame = +2
Query: 14 SSTVGGWGKRSEEDAGDGWSK------VERSGDKAQQSG--WGKKADEAD------WNKK 151
S ++ WGK+ E+D W K V G K ++ G WGKK ++A+ W ++
Sbjct: 1593 SESLSSWGKKVEKDGVSSWGKKVENDGVSSWGKKVEKDGGSWGKKVEQAENHSHQSWKEE 1652
Query: 152 DMQPLPDQAGLLNSSTDVVWGEKSEDDSANGWGTKADKAVDTRWNKKDSQSLSDQ----- 316
+ L + WG+K E+D + WG K +K + W +K + +
Sbjct: 1653 KSESLSSWGKKVEKDGVSSWGKKGENDGVSSWGKKVEKDGGSSWGEKVESENTPRPSGKG 1712
Query: 317 DYPSSTANWSKRSVEDSEDAWGKKAKNSGNDAQQSGPWLPKKVDGAAETPWNKNNSRPST 496
+ S ++W K+ ED + GKK + G + W KKVD + P N S
Sbjct: 1713 EQSGSWSSWGKQVKEDGGASSGKKVEKDGGSS-----W-GKKVDEPEDKPHQSGNGEQS- 1765
Query: 497 AGILGERLEEDSGDGWGKKVER 562
S WGKKVE+
Sbjct: 1766 ----------GSWSSWGKKVEK 1777
Score = 73.6 bits (179), Expect = 7e-12
Identities = 55/187 (29%), Positives = 82/187 (43%), Gaps = 4/187 (2%)
Frame = +2
Query: 14 SSTVGGWGKRSEEDAGDGWSKVERSGDKAQQSGWGKKA--DEADWNKK--DMQPLPDQAG 181
S + WGK+ +E E+SG S WGKK D W KK +M+ Q+G
Sbjct: 1409 SGSWSAWGKKVDEAGNSQSGNEEQSGSL---SSWGKKVEKDTGSWGKKVEEMESHNPQSG 1465
Query: 182 LLNSSTDVVWGEKSEDDSANGWGTKADKAVDTRWNKKDSQSLSDQDYPSSTANWSKRSVE 361
+ + S + WG K +K D+ W KK + D SS W K+
Sbjct: 1466 -----------KDEKSGSLSSWGKKVEKDGDSSWGKK-----VEIDGGSS---WGKKVEI 1506
Query: 362 DSEDAWGKKAKNSGNDAQQSGPWLPKKVDGAAETPWNKNNSRPSTAGILGERLEEDSGDG 541
D +WGKK + + N + QSG K+ + + W K + + G+++E D
Sbjct: 1507 DGGSSWGKKVEEAENYSHQSG----KEEKSESLSSWGKKVEKDGVSS-WGKKVENDGVSS 1561
Query: 542 WGKKVER 562
WGKKVE+
Sbjct: 1562 WGKKVEK 1568
Score = 68.9 bits (167), Expect = 3e-10
Identities = 55/192 (28%), Positives = 90/192 (46%), Gaps = 16/192 (8%)
Frame = +2
Query: 32 WGKRSEEDAGDGWSKVERSGDKAQQ---SGWGKKADEADWNKKDMQPLPDQAGLLNSSTD 202
WG +++E S ++SG+ AQ S WGKK DEA ++ + +Q+G L+S
Sbjct: 1389 WGGKAKEVD----SNPQQSGNTAQSGSWSAWGKKVDEAGNSQSGNE---EQSGSLSS--- 1438
Query: 203 VVWGEKSEDDSANGWGTKADKAVDTRWNKKDSQSLSDQDYPSSTANWSKRSVEDSEDAWG 382
WG+K E D+ + WG K ++ + QS D+ S ++W K+ +D + +WG
Sbjct: 1439 --WGKKVEKDTGS-WGKKVEE-----MESHNPQSGKDEK-SGSLSSWGKKVEKDGDSSWG 1489
Query: 383 KKAKNSGNDAQQSGPWLPKKVDGAAETPWNK-------------NNSRPSTAGILGERLE 523
KK + G + W KKV+ + W K + + G+++E
Sbjct: 1490 KKVEIDGGSS-----W-GKKVEIDGGSSWGKKVEEAENYSHQSGKEEKSESLSSWGKKVE 1543
Query: 524 EDSGDGWGKKVE 559
+D WGKKVE
Sbjct: 1544 KDGVSSWGKKVE 1555
Score = 65.9 bits (159), Expect = 3e-09
Identities = 61/206 (29%), Positives = 94/206 (45%), Gaps = 28/206 (13%)
Frame = +2
Query: 32 WGKRSEED--AGDGW--SKVERSGDKAQQ-----SGWGKKADEADWNKKDMQPLPDQAG- 181
W K S E+ +G W +K + +KA S WG+K D+A+ N P Q+G
Sbjct: 1327 WEKASSENVKSGGSWDMAKTQNGAEKAVNQSDSWSSWGRKVDDAENN-------PRQSGN 1379
Query: 182 --LLNSSTDVVWGEKSEDDSANGW--GTKADKAVDTRWNKK-----DSQSLSDQDYPSST 334
L S + WG K+++ +N G A + W KK +SQS +++ S
Sbjct: 1380 GEQLESWS--AWGGKAKEVDSNPQQSGNTAQSGSWSAWGKKVDEAGNSQS-GNEEQSGSL 1436
Query: 335 ANWSKRSVEDSEDAWGKKAKNSGNDAQQSGP---------WLPKKVDGAAETPWNKNNSR 487
++W K+ VE +WGKK + + QSG W KKV+ ++ W K
Sbjct: 1437 SSWGKK-VEKDTGSWGKKVEEMESHNPQSGKDEKSGSLSSW-GKKVEKDGDSSWGKKVEI 1494
Query: 488 PSTAGILGERLEEDSGDGWGKKVERS 565
+ G+++E D G WGKKVE +
Sbjct: 1495 DGGSS-WGKKVEIDGGSSWGKKVEEA 1519
>XP_016454834.1 PREDICTED: DNA-directed RNA polymerase V subunit 1-like, partial
[Nicotiana tabacum]
Length = 1252
Score = 85.5 bits (210), Expect = 5e-16
Identities = 48/184 (26%), Positives = 83/184 (45%), Gaps = 1/184 (0%)
Frame = +2
Query: 14 SSTVGGWGKRSEEDAGDGWSKVERSGDKAQQSGWGKKADE-ADWNKKDMQPLPDQAGLLN 190
S ++ WGK+ E+D G +VE + + QSG +K+ + W KK + G +
Sbjct: 703 SGSLSSWGKKVEKDGGSWGKRVEETENHNHQSGKDEKSGSLSSWGKKVEKDGDSSWGKVE 762
Query: 191 SSTDVVWGEKSEDDSANGWGTKADKAVDTRWNKKDSQSLSDQDYPSSTANWSKRSVEDSE 370
WG+K E D + WG K ++A + S ++ S ++W K+ +D
Sbjct: 763 IDGGSSWGKKVEIDGGSSWGKKVEEA------ENHSHQSGKEEKSESLSSWGKKVEKDGV 816
Query: 371 DAWGKKAKNSGNDAQQSGPWLPKKVDGAAETPWNKNNSRPSTAGILGERLEEDSGDGWGK 550
+WGKK + G G W K + + + + G+++E+D G WGK
Sbjct: 817 SSWGKKVEKDG------GSWGKKVEQAEIHSQQSGKEEKSESLSSWGKQVEKDGGSSWGK 870
Query: 551 KVER 562
+VE+
Sbjct: 871 QVEK 874
Score = 74.7 bits (182), Expect = 3e-12
Identities = 54/183 (29%), Positives = 83/183 (45%), Gaps = 2/183 (1%)
Frame = +2
Query: 23 VGGWGKRSEEDAGDGWSKVERSGDKAQQSGWGKKADE-ADWNKKDMQPLPDQAGLLNSST 199
V WGK+ E+D G KVE++ +QQSG +K++ + W K+ + G
Sbjct: 816 VSSWGKKVEKDGGSWGKKVEQAEIHSQQSGKEEKSESLSSWGKQVEKDGGSSWG-KQVEK 874
Query: 200 DVVWGEKSEDDSANGWGTKADKAVDTRWNKKDSQSLSDQDYPSSTANWSKRSVEDSEDAW 379
WG+K E D + WG K + R + K QS S ++W K+ ED +W
Sbjct: 875 GGSWGKKVEKDGGSSWGEKVEAENTPRPSGKGEQS-------GSWSSWGKQVKEDGGASW 927
Query: 380 GKKAKNSGNDAQQSGPWLPKKVDGAAETPWNK-NNSRPSTAGILGERLEEDSGDGWGKKV 556
G+K + G + W KKVD + P N +P + G+++E+D G G K
Sbjct: 928 GEKVEKDGGSS-----W-GKKVDEPEDKPHQSGNGEQPGSWSSWGKKVEKDGGSWDGPKQ 981
Query: 557 ERS 565
S
Sbjct: 982 SNS 984
Score = 70.1 bits (170), Expect = 1e-10
Identities = 52/190 (27%), Positives = 81/190 (42%), Gaps = 9/190 (4%)
Frame = +2
Query: 14 SSTVGGWGKRSEEDAGDGWSK-VERSGDKAQQSGWGKKADE---ADWNKK---DMQPLPD 172
S ++ WGK+ E+D G W K VE+ G WGKK ++ + W +K + P P
Sbjct: 850 SESLSSWGKQVEKDGGSSWGKQVEKGG------SWGKKVEKDGGSSWGEKVEAENTPRPS 903
Query: 173 QAGLLNSSTDVVWGEKSEDDSANGWGTKADKAVDTRWNKKDSQSLSDQDYPSSTANWSKR 352
G + S WG++ ++D WG K +K + W KK + +D P + N +
Sbjct: 904 GKGEQSGSWS-SWGKQVKEDGGASWGEKVEKDGGSSWGKKVDE---PEDKPHQSGNGEQ- 958
Query: 353 SVEDSEDAWGKKAKNSGNDAQQSGPWLPKKVDGAAETPWNKNNSRP--STAGILGERLEE 526
S +WGKK + G G W K +E+ W K +A G R +
Sbjct: 959 --PGSWSSWGKKVEKDG------GSWDGPK-QSNSESSWGKTTKGGGFGSAAAEGNRSVD 1009
Query: 527 DSGDGWGKKV 556
+GW +
Sbjct: 1010 QLVNGWSSNI 1019
Score = 66.6 bits (161), Expect = 2e-09
Identities = 59/207 (28%), Positives = 94/207 (45%), Gaps = 29/207 (14%)
Frame = +2
Query: 32 WGKRSEED--AGDGW--SKVERSGDKAQQ-----SGWGKKADEADWNKKDMQPLPDQAG- 181
W K S E+ +G W +K + +KA S WG+K DEA+ N P Q+G
Sbjct: 595 WEKASSENVKSGGSWDMAKTQNGAEKAVNQSDSWSSWGRKVDEAENN-------PRQSGN 647
Query: 182 --LLNSSTDVVWGEKSEDDSANGW--GTKADKAVDTRWNKKDSQS------LSDQDYPSS 331
L S + WG K+++ +N G A + W KK ++ +++ S
Sbjct: 648 GEQLESWS--AWGGKAKEVDSNPQQSGNTAQSGSWSAWGKKVDEAGNSPRQSGNEEQSGS 705
Query: 332 TANWSKRSVEDSEDAWGKKAKNSGNDAQQSGP---------WLPKKVDGAAETPWNKNNS 484
++W K+ VE +WGK+ + + N QSG W KKV+ ++ W K
Sbjct: 706 LSSWGKK-VEKDGGSWGKRVEETENHNHQSGKDEKSGSLSSW-GKKVEKDGDSSWGKVEI 763
Query: 485 RPSTAGILGERLEEDSGDGWGKKVERS 565
++ G+++E D G WGKKVE +
Sbjct: 764 DGGSSW--GKKVEIDGGSSWGKKVEEA 788
>XP_018632619.1 PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X6
[Nicotiana tomentosiformis]
Length = 1998
Score = 85.5 bits (210), Expect = 5e-16
Identities = 48/184 (26%), Positives = 83/184 (45%), Gaps = 1/184 (0%)
Frame = +2
Query: 14 SSTVGGWGKRSEEDAGDGWSKVERSGDKAQQSGWGKKADE-ADWNKKDMQPLPDQAGLLN 190
S ++ WGK+ E+D G +VE + + QSG +K+ + W KK + G +
Sbjct: 1449 SGSLSSWGKKVEKDGGSWGKRVEETENHNHQSGKDEKSGSLSSWGKKVEKDGDSSWGKVE 1508
Query: 191 SSTDVVWGEKSEDDSANGWGTKADKAVDTRWNKKDSQSLSDQDYPSSTANWSKRSVEDSE 370
WG+K E D + WG K ++A + S ++ S ++W K+ +D
Sbjct: 1509 IDGGSSWGKKVEIDGGSSWGKKVEEA------ENHSHQSGKEEKSESLSSWGKKVEKDGV 1562
Query: 371 DAWGKKAKNSGNDAQQSGPWLPKKVDGAAETPWNKNNSRPSTAGILGERLEEDSGDGWGK 550
+WGKK + G G W K + + + + G+++E+D G WGK
Sbjct: 1563 SSWGKKVEKDG------GSWGKKVEQAEIHSQQSGKEEKSESLSSWGKQVEKDGGSSWGK 1616
Query: 551 KVER 562
+VE+
Sbjct: 1617 QVEK 1620
Score = 74.7 bits (182), Expect = 3e-12
Identities = 54/183 (29%), Positives = 83/183 (45%), Gaps = 2/183 (1%)
Frame = +2
Query: 23 VGGWGKRSEEDAGDGWSKVERSGDKAQQSGWGKKADE-ADWNKKDMQPLPDQAGLLNSST 199
V WGK+ E+D G KVE++ +QQSG +K++ + W K+ + G
Sbjct: 1562 VSSWGKKVEKDGGSWGKKVEQAEIHSQQSGKEEKSESLSSWGKQVEKDGGSSWG-KQVEK 1620
Query: 200 DVVWGEKSEDDSANGWGTKADKAVDTRWNKKDSQSLSDQDYPSSTANWSKRSVEDSEDAW 379
WG+K E D + WG K + R + K QS S ++W K+ ED +W
Sbjct: 1621 GGSWGKKVEKDGGSSWGEKVEAENTPRPSGKGEQS-------GSWSSWGKQVKEDGGASW 1673
Query: 380 GKKAKNSGNDAQQSGPWLPKKVDGAAETPWNK-NNSRPSTAGILGERLEEDSGDGWGKKV 556
G+K + G + W KKVD + P N +P + G+++E+D G G K
Sbjct: 1674 GEKVEKDGGSS-----W-GKKVDEPEDKPHQSGNGEQPGSWSSWGKKVEKDGGSWDGPKQ 1727
Query: 557 ERS 565
S
Sbjct: 1728 SNS 1730
Score = 70.1 bits (170), Expect = 1e-10
Identities = 52/190 (27%), Positives = 81/190 (42%), Gaps = 9/190 (4%)
Frame = +2
Query: 14 SSTVGGWGKRSEEDAGDGWSK-VERSGDKAQQSGWGKKADE---ADWNKK---DMQPLPD 172
S ++ WGK+ E+D G W K VE+ G WGKK ++ + W +K + P P
Sbjct: 1596 SESLSSWGKQVEKDGGSSWGKQVEKGG------SWGKKVEKDGGSSWGEKVEAENTPRPS 1649
Query: 173 QAGLLNSSTDVVWGEKSEDDSANGWGTKADKAVDTRWNKKDSQSLSDQDYPSSTANWSKR 352
G + S WG++ ++D WG K +K + W KK + +D P + N +
Sbjct: 1650 GKGEQSGSWS-SWGKQVKEDGGASWGEKVEKDGGSSWGKKVDE---PEDKPHQSGNGEQ- 1704
Query: 353 SVEDSEDAWGKKAKNSGNDAQQSGPWLPKKVDGAAETPWNKNNSRP--STAGILGERLEE 526
S +WGKK + G G W K +E+ W K +A G R +
Sbjct: 1705 --PGSWSSWGKKVEKDG------GSWDGPK-QSNSESSWGKTTKGGGFGSAAAEGNRRVD 1755
Query: 527 DSGDGWGKKV 556
+GW +
Sbjct: 1756 QLVNGWSSNI 1765
Score = 66.6 bits (161), Expect = 2e-09
Identities = 59/207 (28%), Positives = 94/207 (45%), Gaps = 29/207 (14%)
Frame = +2
Query: 32 WGKRSEED--AGDGW--SKVERSGDKAQQ-----SGWGKKADEADWNKKDMQPLPDQAG- 181
W K S E+ +G W +K + +KA S WG+K DEA+ N P Q+G
Sbjct: 1341 WEKASSENVKSGGSWDMAKTQNGAEKAVNQSDSWSSWGRKVDEAENN-------PRQSGN 1393
Query: 182 --LLNSSTDVVWGEKSEDDSANGW--GTKADKAVDTRWNKKDSQS------LSDQDYPSS 331
L S + WG K+++ +N G A + W KK ++ +++ S
Sbjct: 1394 GEQLESWS--AWGGKAKEVDSNPQQSGNTAQSGSWSAWGKKVDEAGNSPRQSGNEEQSGS 1451
Query: 332 TANWSKRSVEDSEDAWGKKAKNSGNDAQQSGP---------WLPKKVDGAAETPWNKNNS 484
++W K+ VE +WGK+ + + N QSG W KKV+ ++ W K
Sbjct: 1452 LSSWGKK-VEKDGGSWGKRVEETENHNHQSGKDEKSGSLSSW-GKKVEKDGDSSWGKVEI 1509
Query: 485 RPSTAGILGERLEEDSGDGWGKKVERS 565
++ G+++E D G WGKKVE +
Sbjct: 1510 DGGSSW--GKKVEIDGGSSWGKKVEEA 1534
>XP_018632614.1 PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X3
[Nicotiana tomentosiformis]
Length = 2014
Score = 85.5 bits (210), Expect = 5e-16
Identities = 58/213 (27%), Positives = 93/213 (43%), Gaps = 30/213 (14%)
Frame = +2
Query: 14 SSTVGGWGKRSEEDAGDGWSKVERSGDKAQQSGWGKKADE-ADWNKKDMQPLPDQAGLLN 190
S ++ WGK+ E+D G +VE + + QSG +K+ + W KK + G +
Sbjct: 1491 SGSLSSWGKKVEKDGGSWGKRVEETENHNHQSGKDEKSGSLSSWGKKVEKDGDSSWGKVE 1550
Query: 191 SSTDVVWGEKSEDDSANGWGTKADKAVDTRWNKK-----------------DSQSLSDQD 319
WG+K E D + WG K +K + W KK SQ ++
Sbjct: 1551 IDGGSSWGKKVEIDGGSSWGKKVEKDGVSSWGKKVEKDGGSWGKKVEQAEIHSQQSGKEE 1610
Query: 320 YPSSTANWSKRSVEDSEDAWGKKAKNSGNDAQQSGPWLPKKVDGAAETPWN-----KNNS 484
S ++W K+ +D +WGK+ ++ G W KKV+ + W +N
Sbjct: 1611 KSESLSSWGKQVEKDGGSSWGKQ-------VEKGGSW-GKKVEKDGGSSWGEKVEAENTP 1662
Query: 485 RPSTAG-------ILGERLEEDSGDGWGKKVER 562
RPS G G++++ED G WG+KVE+
Sbjct: 1663 RPSGKGEQSGSWSSWGKQVKEDGGASWGEKVEK 1695
Score = 74.7 bits (182), Expect = 3e-12
Identities = 54/183 (29%), Positives = 83/183 (45%), Gaps = 2/183 (1%)
Frame = +2
Query: 23 VGGWGKRSEEDAGDGWSKVERSGDKAQQSGWGKKADE-ADWNKKDMQPLPDQAGLLNSST 199
V WGK+ E+D G KVE++ +QQSG +K++ + W K+ + G
Sbjct: 1578 VSSWGKKVEKDGGSWGKKVEQAEIHSQQSGKEEKSESLSSWGKQVEKDGGSSWG-KQVEK 1636
Query: 200 DVVWGEKSEDDSANGWGTKADKAVDTRWNKKDSQSLSDQDYPSSTANWSKRSVEDSEDAW 379
WG+K E D + WG K + R + K QS S ++W K+ ED +W
Sbjct: 1637 GGSWGKKVEKDGGSSWGEKVEAENTPRPSGKGEQS-------GSWSSWGKQVKEDGGASW 1689
Query: 380 GKKAKNSGNDAQQSGPWLPKKVDGAAETPWNK-NNSRPSTAGILGERLEEDSGDGWGKKV 556
G+K + G + W KKVD + P N +P + G+++E+D G G K
Sbjct: 1690 GEKVEKDGGSS-----W-GKKVDEPEDKPHQSGNGEQPGSWSSWGKKVEKDGGSWDGPKQ 1743
Query: 557 ERS 565
S
Sbjct: 1744 SNS 1746
Score = 68.6 bits (166), Expect = 4e-10
Identities = 44/154 (28%), Positives = 69/154 (44%), Gaps = 24/154 (15%)
Frame = +2
Query: 14 SSTVGGWGKRSEEDAGDGWSK-VERSGDKAQQSGWGKKADE---ADWNKK---DMQPLPD 172
S ++ WGK+ E+D G W K VE+ G WGKK ++ + W +K + P P
Sbjct: 1612 SESLSSWGKQVEKDGGSSWGKQVEKGGS------WGKKVEKDGGSSWGEKVEAENTPRPS 1665
Query: 173 QAGLLNSSTDVVWGEKSEDDSANGWGTKADKAVDTRWNKKDSQ------SLSDQDYPSST 334
G + S WG++ ++D WG K +K + W KK + + + P S
Sbjct: 1666 GKGEQSGSWSS-WGKQVKEDGGASWGEKVEKDGGSSWGKKVDEPEDKPHQSGNGEQPGSW 1724
Query: 335 ANWSKRSVED-----------SEDAWGKKAKNSG 403
++W K+ +D SE +WGK K G
Sbjct: 1725 SSWGKKVEKDGGSWDGPKQSNSESSWGKTTKGGG 1758
Score = 67.0 bits (162), Expect = 1e-09
Identities = 59/206 (28%), Positives = 93/206 (45%), Gaps = 29/206 (14%)
Frame = +2
Query: 32 WGKRSEED--AGDGW--SKVERSGDKAQQ-----SGWGKKADEADWNKKDMQPLPDQAG- 181
W K S E+ +G W +K + +KA S WG+K DEA+ N P Q+G
Sbjct: 1383 WEKASSENVKSGGSWDMAKTQNGAEKAVNQSDSWSSWGRKVDEAENN-------PRQSGN 1435
Query: 182 --LLNSSTDVVWGEKSEDDSANGW--GTKADKAVDTRWNKK------DSQSLSDQDYPSS 331
L S + WG K+++ +N G A + W KK + +++ S
Sbjct: 1436 GEQLESWS--AWGGKAKEVDSNPQQSGNTAQSGSWSAWGKKVDEAGNSPRQSGNEEQSGS 1493
Query: 332 TANWSKRSVEDSEDAWGKKAKNSGNDAQQSG---------PWLPKKVDGAAETPWNKNNS 484
++W K+ VE +WGK+ + + N QSG W KKV+ ++ W K
Sbjct: 1494 LSSWGKK-VEKDGGSWGKRVEETENHNHQSGKDEKSGSLSSW-GKKVEKDGDSSWGKVEI 1551
Query: 485 RPSTAGILGERLEEDSGDGWGKKVER 562
++ G+++E D G WGKKVE+
Sbjct: 1552 DGGSS--WGKKVEIDGGSSWGKKVEK 1575
>XP_018632606.1 PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X1
[Nicotiana tomentosiformis]
Length = 2040
Score = 85.5 bits (210), Expect = 5e-16
Identities = 48/184 (26%), Positives = 83/184 (45%), Gaps = 1/184 (0%)
Frame = +2
Query: 14 SSTVGGWGKRSEEDAGDGWSKVERSGDKAQQSGWGKKADE-ADWNKKDMQPLPDQAGLLN 190
S ++ WGK+ E+D G +VE + + QSG +K+ + W KK + G +
Sbjct: 1491 SGSLSSWGKKVEKDGGSWGKRVEETENHNHQSGKDEKSGSLSSWGKKVEKDGDSSWGKVE 1550
Query: 191 SSTDVVWGEKSEDDSANGWGTKADKAVDTRWNKKDSQSLSDQDYPSSTANWSKRSVEDSE 370
WG+K E D + WG K ++A + S ++ S ++W K+ +D
Sbjct: 1551 IDGGSSWGKKVEIDGGSSWGKKVEEA------ENHSHQSGKEEKSESLSSWGKKVEKDGV 1604
Query: 371 DAWGKKAKNSGNDAQQSGPWLPKKVDGAAETPWNKNNSRPSTAGILGERLEEDSGDGWGK 550
+WGKK + G G W K + + + + G+++E+D G WGK
Sbjct: 1605 SSWGKKVEKDG------GSWGKKVEQAEIHSQQSGKEEKSESLSSWGKQVEKDGGSSWGK 1658
Query: 551 KVER 562
+VE+
Sbjct: 1659 QVEK 1662
Score = 74.7 bits (182), Expect = 3e-12
Identities = 54/183 (29%), Positives = 83/183 (45%), Gaps = 2/183 (1%)
Frame = +2
Query: 23 VGGWGKRSEEDAGDGWSKVERSGDKAQQSGWGKKADE-ADWNKKDMQPLPDQAGLLNSST 199
V WGK+ E+D G KVE++ +QQSG +K++ + W K+ + G
Sbjct: 1604 VSSWGKKVEKDGGSWGKKVEQAEIHSQQSGKEEKSESLSSWGKQVEKDGGSSWG-KQVEK 1662
Query: 200 DVVWGEKSEDDSANGWGTKADKAVDTRWNKKDSQSLSDQDYPSSTANWSKRSVEDSEDAW 379
WG+K E D + WG K + R + K QS S ++W K+ ED +W
Sbjct: 1663 GGSWGKKVEKDGGSSWGEKVEAENTPRPSGKGEQS-------GSWSSWGKQVKEDGGASW 1715
Query: 380 GKKAKNSGNDAQQSGPWLPKKVDGAAETPWNK-NNSRPSTAGILGERLEEDSGDGWGKKV 556
G+K + G + W KKVD + P N +P + G+++E+D G G K
Sbjct: 1716 GEKVEKDGGSS-----W-GKKVDEPEDKPHQSGNGEQPGSWSSWGKKVEKDGGSWDGPKQ 1769
Query: 557 ERS 565
S
Sbjct: 1770 SNS 1772
Score = 70.1 bits (170), Expect = 1e-10
Identities = 52/190 (27%), Positives = 81/190 (42%), Gaps = 9/190 (4%)
Frame = +2
Query: 14 SSTVGGWGKRSEEDAGDGWSK-VERSGDKAQQSGWGKKADE---ADWNKK---DMQPLPD 172
S ++ WGK+ E+D G W K VE+ G WGKK ++ + W +K + P P
Sbjct: 1638 SESLSSWGKQVEKDGGSSWGKQVEKGG------SWGKKVEKDGGSSWGEKVEAENTPRPS 1691
Query: 173 QAGLLNSSTDVVWGEKSEDDSANGWGTKADKAVDTRWNKKDSQSLSDQDYPSSTANWSKR 352
G + S WG++ ++D WG K +K + W KK + +D P + N +
Sbjct: 1692 GKGEQSGSWS-SWGKQVKEDGGASWGEKVEKDGGSSWGKKVDE---PEDKPHQSGNGEQ- 1746
Query: 353 SVEDSEDAWGKKAKNSGNDAQQSGPWLPKKVDGAAETPWNKNNSRP--STAGILGERLEE 526
S +WGKK + G G W K +E+ W K +A G R +
Sbjct: 1747 --PGSWSSWGKKVEKDG------GSWDGPK-QSNSESSWGKTTKGGGFGSAAAEGNRRVD 1797
Query: 527 DSGDGWGKKV 556
+GW +
Sbjct: 1798 QLVNGWSSNI 1807
Score = 66.6 bits (161), Expect = 2e-09
Identities = 59/207 (28%), Positives = 94/207 (45%), Gaps = 29/207 (14%)
Frame = +2
Query: 32 WGKRSEED--AGDGW--SKVERSGDKAQQ-----SGWGKKADEADWNKKDMQPLPDQAG- 181
W K S E+ +G W +K + +KA S WG+K DEA+ N P Q+G
Sbjct: 1383 WEKASSENVKSGGSWDMAKTQNGAEKAVNQSDSWSSWGRKVDEAENN-------PRQSGN 1435
Query: 182 --LLNSSTDVVWGEKSEDDSANGW--GTKADKAVDTRWNKKDSQS------LSDQDYPSS 331
L S + WG K+++ +N G A + W KK ++ +++ S
Sbjct: 1436 GEQLESWS--AWGGKAKEVDSNPQQSGNTAQSGSWSAWGKKVDEAGNSPRQSGNEEQSGS 1493
Query: 332 TANWSKRSVEDSEDAWGKKAKNSGNDAQQSGP---------WLPKKVDGAAETPWNKNNS 484
++W K+ VE +WGK+ + + N QSG W KKV+ ++ W K
Sbjct: 1494 LSSWGKK-VEKDGGSWGKRVEETENHNHQSGKDEKSGSLSSW-GKKVEKDGDSSWGKVEI 1551
Query: 485 RPSTAGILGERLEEDSGDGWGKKVERS 565
++ G+++E D G WGKKVE +
Sbjct: 1552 DGGSSW--GKKVEIDGGSSWGKKVEEA 1576
>XP_018632625.1 PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X8
[Nicotiana tomentosiformis]
Length = 1981
Score = 84.7 bits (208), Expect = 1e-15
Identities = 57/196 (29%), Positives = 89/196 (45%), Gaps = 12/196 (6%)
Frame = +2
Query: 14 SSTVGGWGKRSEEDAGDGWSKVERSGDKAQQSGWGKKAD---EADWNKK--DMQPLPDQA 178
S ++ WGK+ E+D W KVE G S WGKK + + W KK + + Q+
Sbjct: 1528 SGSLSSWGKKVEKDGDSSWGKVEIDGG----SSWGKKVEIDGGSSWGKKVEEAENHSHQS 1583
Query: 179 GLLNSSTDVV-WGEKSEDDSANGWGTKADKAVDTRWNKKDSQSLSDQ-----DYPSSTAN 340
G S + WG+K E D + WG K +K + W +K + + + S ++
Sbjct: 1584 GKEEKSESLSSWGKKVEKDGVSSWGKKVEKDGGSSWGEKVEAENTPRPSGKGEQSGSWSS 1643
Query: 341 WSKRSVEDSEDAWGKKAKNSGNDAQQSGPWLPKKVDGAAETPWNK-NNSRPSTAGILGER 517
W K+ ED +WG+K + G + W KKVD + P N +P + G++
Sbjct: 1644 WGKQVKEDGGASWGEKVEKDGGSS-----W-GKKVDEPEDKPHQSGNGEQPGSWSSWGKK 1697
Query: 518 LEEDSGDGWGKKVERS 565
+E+D G G K S
Sbjct: 1698 VEKDGGSWDGPKQSNS 1713
Score = 84.0 bits (206), Expect = 2e-15
Identities = 53/200 (26%), Positives = 85/200 (42%), Gaps = 18/200 (9%)
Frame = +2
Query: 14 SSTVGGWGKRSEEDAGDGWSKVERSGDKAQQSGWGKKADE-ADWNKKDMQPLPDQAGLLN 190
S ++ WGK+ E+D G +VE + + QSG +K+ + W KK + G +
Sbjct: 1491 SGSLSSWGKKVEKDGGSWGKRVEETENHNHQSGKDEKSGSLSSWGKKVEKDGDSSWGKVE 1550
Query: 191 SSTDVVWGEKSEDDSANGWGTKADKAVDTRWNKKDSQSLSDQDYPSSTANWSKRSVEDSE 370
WG+K E D + WG K ++A + S ++ S ++W K+ +D
Sbjct: 1551 IDGGSSWGKKVEIDGGSSWGKKVEEA------ENHSHQSGKEEKSESLSSWGKKVEKDGV 1604
Query: 371 DAWGKKAKNSGNDA-----------------QQSGPWLPKKVDGAAETPWNKNNSRPSTA 499
+WGKK + G + +QSG W + W K A
Sbjct: 1605 SSWGKKVEKDGGSSWGEKVEAENTPRPSGKGEQSGSW----------SSWGKQVKEDGGA 1654
Query: 500 GILGERLEEDSGDGWGKKVE 559
GE++E+D G WGKKV+
Sbjct: 1655 S-WGEKVEKDGGSSWGKKVD 1673
Score = 66.6 bits (161), Expect = 2e-09
Identities = 59/207 (28%), Positives = 93/207 (44%), Gaps = 29/207 (14%)
Frame = +2
Query: 32 WGKRSEED--AGDGW--SKVERSGDKAQQ-----SGWGKKADEADWNKKDMQPLPDQAG- 181
W K S E+ +G W +K + +KA S WG+K DEA+ N P Q+G
Sbjct: 1383 WEKASSENVKSGGSWDMAKTQNGAEKAVNQSDSWSSWGRKVDEAENN-------PRQSGN 1435
Query: 182 --LLNSSTDVVWGEKSEDDSANGW--GTKADKAVDTRWNKK------DSQSLSDQDYPSS 331
L S + WG K+++ +N G A + W KK + +++ S
Sbjct: 1436 GEQLESWS--AWGGKAKEVDSNPQQSGNTAQSGSWSAWGKKVDEAGNSPRQSGNEEQSGS 1493
Query: 332 TANWSKRSVEDSEDAWGKKAKNSGNDAQQSG---------PWLPKKVDGAAETPWNKNNS 484
++W K+ VE +WGK+ + + N QSG W KKV+ ++ W K
Sbjct: 1494 LSSWGKK-VEKDGGSWGKRVEETENHNHQSGKDEKSGSLSSW-GKKVEKDGDSSWGKVEI 1551
Query: 485 RPSTAGILGERLEEDSGDGWGKKVERS 565
++ G+++E D G WGKKVE +
Sbjct: 1552 DGGSS--WGKKVEIDGGSSWGKKVEEA 1576
Score = 63.2 bits (152), Expect = 3e-08
Identities = 46/170 (27%), Positives = 69/170 (40%), Gaps = 46/170 (27%)
Frame = +2
Query: 32 WGKRSEEDAGDGWSK-VERSGDKAQQSG----------WGKKADE---ADWNKK------ 151
WGK+ E D G W K VE + + + QSG WGKK ++ + W KK
Sbjct: 1557 WGKKVEIDGGSSWGKKVEEAENHSHQSGKEEKSESLSSWGKKVEKDGVSSWGKKVEKDGG 1616
Query: 152 ---------DMQPLPDQAGLLNSSTDVVWGEKSEDDSANGWGTKADKAVDTRWNKKDSQ- 301
+ P P G + S WG++ ++D WG K +K + W KK +
Sbjct: 1617 SSWGEKVEAENTPRPSGKGEQSGSWSS-WGKQVKEDGGASWGEKVEKDGGSSWGKKVDEP 1675
Query: 302 -----SLSDQDYPSSTANWSKRSVED-----------SEDAWGKKAKNSG 403
+ + P S ++W K+ +D SE +WGK K G
Sbjct: 1676 EDKPHQSGNGEQPGSWSSWGKKVEKDGGSWDGPKQSNSESSWGKTTKGGG 1725
>XP_019225778.1 PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X1
[Nicotiana attenuata] OIT32449.1 dna-directed rna
polymerase v subunit 1 [Nicotiana attenuata]
Length = 2036
Score = 84.0 bits (206), Expect = 2e-15
Identities = 69/216 (31%), Positives = 99/216 (45%), Gaps = 32/216 (14%)
Frame = +2
Query: 14 SSTVGGWGKRSEEDAGDGWSKVERSGDKAQQ---SGWGKKADEADWNKKDMQPLPDQAGL 184
S ++ WGK+ E+D G W K +SG+ AQ S WGKK DEA N +Q+G
Sbjct: 1435 SGSLSSWGKKVEKDGGS-WGK--QSGNTAQSGSWSAWGKKVDEAG-NSPRQSGNEEQSGS 1490
Query: 185 LNSSTDVV------WGEKSED--------------DSANGWGTKADKAVDTRWNKKDSQS 304
L+S V WG+K E+ S + WG K +K D+ W KK
Sbjct: 1491 LSSWGKKVEKDGGSWGKKVEETENHNHQSGKDEKSGSLSSWGKKVEKDGDSSWGKK---- 1546
Query: 305 LSDQDYPSSTANWSKRSVEDSEDAWGKKAKNSGNDAQQSG---------PWLPKKVDGAA 457
+ D SS W K+ D +WGKK + + N + +SG W KKV+
Sbjct: 1547 -VEIDGGSS---WGKKVEIDGGSSWGKKVEEAENHSHRSGKEEKSESLSSW-GKKVENNG 1601
Query: 458 ETPWNKNNSRPSTAGILGERLEEDSGDGWGKKVERS 565
+ W K + G+++E+D G WGKKVE++
Sbjct: 1602 VSSWGKKVENDGVSS-WGKKVEKDGG-SWGKKVEQA 1635
Score = 76.6 bits (187), Expect = 6e-13
Identities = 55/183 (30%), Positives = 80/183 (43%), Gaps = 2/183 (1%)
Frame = +2
Query: 23 VGGWGKRSEEDAGDGWSKVERSGDKAQQSGWGKKADE-ADWNKKDMQPLPDQAGLLNSST 199
V WGK+ E+D G KVE++ + QSG +K++ + W KK
Sbjct: 1614 VSSWGKKVEKDGGSWGKKVEQAEIHSHQSGKEEKSESLSSWGKK-------------VEK 1660
Query: 200 DVVWGEKSEDDSANGWGTKADKAVDTRWNKKDSQSLSDQDYPSSTANWSKRSVEDSEDAW 379
D WG+K E D + WG K + R + K QS S ++W K+ ED +W
Sbjct: 1661 DGSWGKKVEKDGGSSWGGKVEAENTPRPSGKGEQS-------GSWSSWGKQVKEDGGASW 1713
Query: 380 GKKAKNSGNDAQQSGPWLPKKVDGAAETPWNKNNSRPSTA-GILGERLEEDSGDGWGKKV 556
GKK + G + W KKVD + P N S + G+++E+D G G K
Sbjct: 1714 GKKVEKDGGSS-----W-GKKVDEPEDKPHQSGNGEQSGSWSSWGKKVEKDGGSWGGPKQ 1767
Query: 557 ERS 565
S
Sbjct: 1768 SNS 1770
>XP_018632612.1 PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X2
[Nicotiana tomentosiformis]
Length = 2029
Score = 82.0 bits (201), Expect = 8e-15
Identities = 63/229 (27%), Positives = 99/229 (43%), Gaps = 46/229 (20%)
Frame = +2
Query: 14 SSTVGGWGKRSEEDAGDGWSKVERSGDKAQQSG----------WGKKAD---EADWNKK- 151
S ++ WGK+ E+D G +VE + + QSG WGKK + + W KK
Sbjct: 1491 SGSLSSWGKKVEKDGGSWGKRVEETENHNHQSGKDEKSGSLSSWGKKVEIDGGSSWGKKV 1550
Query: 152 -------------DMQPLPDQAGLLNSSTDV-VWGEKSEDDSANGWGTKADKAVDTRWNK 289
+ + Q+G S + WG+K E D + WG K +K + W K
Sbjct: 1551 EIDGGSSWGKKVEEAENHSHQSGKEEKSESLSSWGKKVEKDGVSSWGKKVEKDGGS-WGK 1609
Query: 290 K------DSQSLSDQDYPSSTANWSKRSVEDSEDAWGKKAKNSGNDAQQSGPWLPKKVDG 451
K SQ ++ S ++W K+ +D +WGK+ ++ G W KKV+
Sbjct: 1610 KVEQAEIHSQQSGKEEKSESLSSWGKQVEKDGGSSWGKQ-------VEKGGSW-GKKVEK 1661
Query: 452 AAETPWN-----KNNSRPSTAG-------ILGERLEEDSGDGWGKKVER 562
+ W +N RPS G G++++ED G WG+KVE+
Sbjct: 1662 DGGSSWGEKVEAENTPRPSGKGEQSGSWSSWGKQVKEDGGASWGEKVEK 1710
Score = 74.7 bits (182), Expect = 3e-12
Identities = 54/183 (29%), Positives = 83/183 (45%), Gaps = 2/183 (1%)
Frame = +2
Query: 23 VGGWGKRSEEDAGDGWSKVERSGDKAQQSGWGKKADE-ADWNKKDMQPLPDQAGLLNSST 199
V WGK+ E+D G KVE++ +QQSG +K++ + W K+ + G
Sbjct: 1593 VSSWGKKVEKDGGSWGKKVEQAEIHSQQSGKEEKSESLSSWGKQVEKDGGSSWG-KQVEK 1651
Query: 200 DVVWGEKSEDDSANGWGTKADKAVDTRWNKKDSQSLSDQDYPSSTANWSKRSVEDSEDAW 379
WG+K E D + WG K + R + K QS S ++W K+ ED +W
Sbjct: 1652 GGSWGKKVEKDGGSSWGEKVEAENTPRPSGKGEQS-------GSWSSWGKQVKEDGGASW 1704
Query: 380 GKKAKNSGNDAQQSGPWLPKKVDGAAETPWNK-NNSRPSTAGILGERLEEDSGDGWGKKV 556
G+K + G + W KKVD + P N +P + G+++E+D G G K
Sbjct: 1705 GEKVEKDGGSS-----W-GKKVDEPEDKPHQSGNGEQPGSWSSWGKKVEKDGGSWDGPKQ 1758
Query: 557 ERS 565
S
Sbjct: 1759 SNS 1761
Score = 68.6 bits (166), Expect = 4e-10
Identities = 44/154 (28%), Positives = 69/154 (44%), Gaps = 24/154 (15%)
Frame = +2
Query: 14 SSTVGGWGKRSEEDAGDGWSK-VERSGDKAQQSGWGKKADE---ADWNKK---DMQPLPD 172
S ++ WGK+ E+D G W K VE+ G WGKK ++ + W +K + P P
Sbjct: 1627 SESLSSWGKQVEKDGGSSWGKQVEKGGS------WGKKVEKDGGSSWGEKVEAENTPRPS 1680
Query: 173 QAGLLNSSTDVVWGEKSEDDSANGWGTKADKAVDTRWNKKDSQ------SLSDQDYPSST 334
G + S WG++ ++D WG K +K + W KK + + + P S
Sbjct: 1681 GKGEQSGSWSS-WGKQVKEDGGASWGEKVEKDGGSSWGKKVDEPEDKPHQSGNGEQPGSW 1739
Query: 335 ANWSKRSVED-----------SEDAWGKKAKNSG 403
++W K+ +D SE +WGK K G
Sbjct: 1740 SSWGKKVEKDGGSWDGPKQSNSESSWGKTTKGGG 1773
Score = 64.3 bits (155), Expect = 1e-08
Identities = 56/198 (28%), Positives = 89/198 (44%), Gaps = 20/198 (10%)
Frame = +2
Query: 32 WGKRSEED--AGDGW--SKVERSGDKAQQ-----SGWGKKADEADWNKKDMQPLPDQAG- 181
W K S E+ +G W +K + +KA S WG+K DEA+ N P Q+G
Sbjct: 1383 WEKASSENVKSGGSWDMAKTQNGAEKAVNQSDSWSSWGRKVDEAENN-------PRQSGN 1435
Query: 182 --LLNSSTDVVWGEKSEDDSANGW--GTKADKAVDTRWNKKDSQS------LSDQDYPSS 331
L S + WG K+++ +N G A + W KK ++ +++ S
Sbjct: 1436 GEQLESWS--AWGGKAKEVDSNPQQSGNTAQSGSWSAWGKKVDEAGNSPRQSGNEEQSGS 1493
Query: 332 TANWSKRSVEDSEDAWGKKAKNSGNDAQQSGPWLPKKVDGAAETPWNKNNSRPSTAGILG 511
++W K+ VE +WGK+ + + N QSG K + + W K + G
Sbjct: 1494 LSSWGKK-VEKDGGSWGKRVEETENHNHQSG----KDEKSGSLSSWGKKVEIDGGSS-WG 1547
Query: 512 ERLEEDSGDGWGKKVERS 565
+++E D G WGKKVE +
Sbjct: 1548 KKVEIDGGSSWGKKVEEA 1565
>XP_016447890.1 PREDICTED: DNA-directed RNA polymerase V subunit 1 [Nicotiana
tabacum]
Length = 1506
Score = 81.6 bits (200), Expect = 1e-14
Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 31/213 (14%)
Frame = +2
Query: 14 SSTVGGWGKRSEEDAGDGWSKVERSGDKAQQSGWGKKADE-ADWNKKDMQPLPDQAGLLN 190
S ++ WGK+ E+D G KVE QSG +K+ + W KK ++ G+ +
Sbjct: 1006 SGSLSSWGKKVEKDTGSWGKKVEEMESHNPQSGKDEKSGSLSSWGKK-----VEKDGVSS 1060
Query: 191 SSTDVVWGEKSEDDSANGWGTKADKAVDTRWNKKDSQSLS------DQDYPSSTANWSKR 352
WG+K E+D + WG K +K + W KK Q+ + ++ S ++W K+
Sbjct: 1061 ------WGKKVENDGVSSWGKKVEKDGGS-WGKKVEQAENHSHQSWKEEKSESLSSWGKK 1113
Query: 353 SVEDSEDAWGKKAKNSGNDAQQSGPWLPKKVDGAAETPW-----NKNNSRPSTAG----- 502
+D +WGKK +N G + W KKV+ + W ++N RPS G
Sbjct: 1114 VEKDGVSSWGKKGENDGVSS-----W-GKKVEKDGGSSWGEKVESENTPRPSGKGEQSGS 1167
Query: 503 --------------ILGERLEEDSGDGWGKKVE 559
G+++E+D G WGKKV+
Sbjct: 1168 WSSWGKQVKEDGGASSGKKVEKDGGSSWGKKVD 1200
Score = 78.6 bits (192), Expect = 1e-13
Identities = 54/202 (26%), Positives = 84/202 (41%), Gaps = 19/202 (9%)
Frame = +2
Query: 14 SSTVGGWGKRSEEDAGDGWSK------VERSGDKAQQSG--WGKKADEAD------WNKK 151
S ++ WGK+ E+D W K V G K ++ G WGKK ++A+ W ++
Sbjct: 1043 SGSLSSWGKKVEKDGVSSWGKKVENDGVSSWGKKVEKDGGSWGKKVEQAENHSHQSWKEE 1102
Query: 152 DMQPLPDQAGLLNSSTDVVWGEKSEDDSANGWGTKADKAVDTRWNKKDSQSLSDQ----- 316
+ L + WG+K E+D + WG K +K + W +K + +
Sbjct: 1103 KSESLSSWGKKVEKDGVSSWGKKGENDGVSSWGKKVEKDGGSSWGEKVESENTPRPSGKG 1162
Query: 317 DYPSSTANWSKRSVEDSEDAWGKKAKNSGNDAQQSGPWLPKKVDGAAETPWNKNNSRPST 496
+ S ++W K+ ED + GKK + G + W KKVD + P N S
Sbjct: 1163 EQSGSWSSWGKQVKEDGGASSGKKVEKDGGSS-----W-GKKVDEPEDKPHQSGNGEQS- 1215
Query: 497 AGILGERLEEDSGDGWGKKVER 562
S WGKKVE+
Sbjct: 1216 ----------GSWSSWGKKVEK 1227
Score = 71.2 bits (173), Expect = 4e-11
Identities = 57/188 (30%), Positives = 93/188 (49%), Gaps = 12/188 (6%)
Frame = +2
Query: 32 WGKRSEEDAGDGWSKVERSGDKAQQ---SGWGKKADEADWNKKDMQPLPDQAGLLNSSTD 202
WG +++E S ++SG+ AQ S WGKK DEA ++ + +Q+G L+S
Sbjct: 962 WGGKAKEVD----SNPQQSGNTAQSGSWSAWGKKVDEAGNSQSGNE---EQSGSLSS--- 1011
Query: 203 VVWGEKSEDDSANGWGTKADKAVDTRWNKKDSQSLSDQDYPSSTANWSKRSVEDSEDAWG 382
WG+K E D+ + WG K ++ + QS D+ S ++W K+ +D +WG
Sbjct: 1012 --WGKKVEKDTGS-WGKKVEE-----MESHNPQSGKDEK-SGSLSSWGKKVEKDGVSSWG 1062
Query: 383 KKAKNSGNDA------QQSGPWLPKKVDGA---AETPWNKNNSRPSTAGILGERLEEDSG 535
KK +N G + + G W KKV+ A + W + S ++ G+++E+D
Sbjct: 1063 KKVENDGVSSWGKKVEKDGGSW-GKKVEQAENHSHQSWKEEKSESLSS--WGKKVEKDGV 1119
Query: 536 DGWGKKVE 559
WGKK E
Sbjct: 1120 SSWGKKGE 1127
Score = 63.5 bits (153), Expect = 2e-08
Identities = 61/206 (29%), Positives = 95/206 (46%), Gaps = 28/206 (13%)
Frame = +2
Query: 32 WGKRSEED--AGDGW--SKVERSGDKAQQ-----SGWGKKADEADWNKKDMQPLPDQAG- 181
W K S E+ +G W +K + +KA S WG+K D+A+ N P Q+G
Sbjct: 900 WEKASSENVKSGGSWDMAKTQNGAEKAVNQSDSWSSWGRKVDDAENN-------PRQSGN 952
Query: 182 --LLNSSTDVVWGEKSEDDSANGW--GTKADKAVDTRWNKK-----DSQSLSDQDYPSST 334
L S + WG K+++ +N G A + W KK +SQS +++ S
Sbjct: 953 GEQLESWS--AWGGKAKEVDSNPQQSGNTAQSGSWSAWGKKVDEAGNSQS-GNEEQSGSL 1009
Query: 335 ANWSKRSVEDSEDAWGKKAKNSGNDAQQSGP---------WLPKKVDGAAETPWNKNNSR 487
++W K+ VE +WGKK + + QSG W KKV+ + W K
Sbjct: 1010 SSWGKK-VEKDTGSWGKKVEEMESHNPQSGKDEKSGSLSSW-GKKVEKDGVSSWGKKVEN 1067
Query: 488 PSTAGILGERLEEDSGDGWGKKVERS 565
+ G+++E+D G WGKKVE++
Sbjct: 1068 DGVSS-WGKKVEKDGGS-WGKKVEQA 1091
>XP_019225779.1 PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X2
[Nicotiana attenuata]
Length = 1983
Score = 81.6 bits (200), Expect = 1e-14
Identities = 57/209 (27%), Positives = 89/209 (42%), Gaps = 27/209 (12%)
Frame = +2
Query: 14 SSTVGGWGKRSEEDAGDGWSKVERSGDKAQQSGWGKKADE-ADWNKKDMQPLPDQAGLLN 190
S ++ WGK+ E+D G KVE + + QSG +K+ + W KK +
Sbjct: 1435 SGSLSSWGKKVEKDGGSWGKKVEETENHNHQSGKDEKSGSLSSWGKK-----------VE 1483
Query: 191 SSTDVVWGEKSEDDSANGWGTKADKAVDTRWNKK------DSQSLSDQDYPSSTANWSKR 352
D WG+K E D + WG K + + W KK S ++ S ++W K+
Sbjct: 1484 KDGDSSWGKKVEIDGGSSWGKKVEIDGGSSWGKKVEEAENHSHRSGKEEKSESLSSWGKK 1543
Query: 353 SVEDSEDAWGKKAKNSGNDA------QQSGPWLPKKVDGA--------------AETPWN 472
+ +WGKK +N G + + G W KKV+ A + + W
Sbjct: 1544 VENNGVSSWGKKVENDGVSSWGKKVEKDGGSW-GKKVEQAEIHSHQSGKEEKSESLSSWG 1602
Query: 473 KNNSRPSTAGILGERLEEDSGDGWGKKVE 559
K + G G+++E+D G WG KVE
Sbjct: 1603 KKVEKD---GSWGKKVEKDGGSSWGGKVE 1628
Score = 78.6 bits (192), Expect = 1e-13
Identities = 59/191 (30%), Positives = 87/191 (45%), Gaps = 14/191 (7%)
Frame = +2
Query: 32 WGKRSEEDAGDGWSK-VERSGDKAQQSGWGKKADEADWNKKDMQPLPDQAGLLNSSTDVV 208
WGK+ E D G W K VE G S WGKK +EA+ N +++ L+S V
Sbjct: 1490 WGKKVEIDGGSSWGKKVEIDGG----SSWGKKVEEAE-NHSHRSGKEEKSESLSSWGKKV 1544
Query: 209 -------WGEKSEDDSANGWGTKADKAVDTRWNKKDSQS------LSDQDYPSSTANWSK 349
WG+K E+D + WG K +K + W KK Q+ ++ S ++W K
Sbjct: 1545 ENNGVSSWGKKVENDGVSSWGKKVEKDGGS-WGKKVEQAEIHSHQSGKEEKSESLSSWGK 1603
Query: 350 RSVEDSEDAWGKKAKNSGNDAQQSGPWLPKKVDGAAETPWNKNNSRPSTAGILGERLEED 529
+ +D +WGKK + G + W K P K S + G++++ED
Sbjct: 1604 KVEKDG--SWGKKVEKDGGSS-----WGGKVEAENTPRPSGKGEQSGSWSS-WGKQVKED 1655
Query: 530 SGDGWGKKVER 562
G WGKKVE+
Sbjct: 1656 GGASWGKKVEK 1666
Score = 67.4 bits (163), Expect = 9e-10
Identities = 57/204 (27%), Positives = 91/204 (44%), Gaps = 26/204 (12%)
Frame = +2
Query: 32 WGKRSEED--AGDGW--SKVERSGDKAQQ-----SGWGKKADEADWNKKDMQPLPDQAGL 184
W K S E+ +G W +K + +KA S WG+K DEA+ N ++
Sbjct: 1327 WEKASSENVKSGGSWDMAKTQNGAEKAVNQSDSWSSWGRKVDEAENNPRES----GNGEQ 1382
Query: 185 LNSSTDVVWGEKSEDDSANGW--GTKADKAVDTRWNKKDSQS------LSDQDYPSSTAN 340
L S + WG K+++ +N G A + W KK ++ +++ S ++
Sbjct: 1383 LESWS--AWGGKAKEVDSNPQQSGNTAQSGSWSAWGKKVDETGNSPRQSGNEEQSGSLSS 1440
Query: 341 WSKRSVEDSEDAWGKKAKNSGNDAQQSGP---------WLPKKVDGAAETPWNKNNSRPS 493
W K+ VE +WGKK + + N QSG W KKV+ ++ W K
Sbjct: 1441 WGKK-VEKDGGSWGKKVEETENHNHQSGKDEKSGSLSSW-GKKVEKDGDSSWGKKVEIDG 1498
Query: 494 TAGILGERLEEDSGDGWGKKVERS 565
+ G+++E D G WGKKVE +
Sbjct: 1499 GSS-WGKKVEIDGGSSWGKKVEEA 1521
Score = 66.6 bits (161), Expect = 2e-09
Identities = 54/206 (26%), Positives = 81/206 (39%), Gaps = 28/206 (13%)
Frame = +2
Query: 23 VGGWGKRSEEDAGDGWSKVERSGDKAQQSG----------WGKKAD-EADWNKK------ 151
V WGK+ E+D G KVE++ + QSG WGKK + + W KK
Sbjct: 1561 VSSWGKKVEKDGGSWGKKVEQAEIHSHQSGKEEKSESLSSWGKKVEKDGSWGKKVEKDGG 1620
Query: 152 ---------DMQPLPDQAGLLNSSTDVVWGEKSEDDSANGWGTKADKAVDTRWNKKDSQS 304
+ P P G + S WG++ ++D WG K +K + W KK +
Sbjct: 1621 SSWGGKVEAENTPRPSGKGEQSGSWSS-WGKQVKEDGGASWGKKVEKDGGSSWGKKVDE- 1678
Query: 305 LSDQDYPSSTANWSKRSVEDSEDAWGKKAKNSGNDAQQSGPWLPKKVDGAAETPWNKNNS 484
+D P + N + S +WGKK + G G W K +E+ W K
Sbjct: 1679 --PEDKPHQSGNGEQ---SGSWSSWGKKVEKDG------GSWGGPK-QSNSESSWGKTTK 1726
Query: 485 RP--STAGILGERLEEDSGDGWGKKV 556
+A G R + +GW +
Sbjct: 1727 GGGFGSAAAEGNRRVDQLVNGWSSSI 1752
>XP_019066486.1 PREDICTED: DNA-directed RNA polymerase V subunit 1 [Solanum
lycopersicum] XP_019066488.1 PREDICTED: DNA-directed RNA
polymerase V subunit 1 [Solanum lycopersicum]
Length = 1984
Score = 81.6 bits (200), Expect = 1e-14
Identities = 62/220 (28%), Positives = 90/220 (40%), Gaps = 39/220 (17%)
Frame = +2
Query: 20 TVGG--WGKRSEEDAGDGWSKVERSGDKAQQSGWGKKADEADWNKKDMQPLPDQAGLLNS 193
T GG WGK++E D G W K G+ S WGKK + + +P D
Sbjct: 1400 TDGGSSWGKKAETDGGSSWGK---KGETDGGSSWGKKGETDGGSSWGEKPETDGGSSWGK 1456
Query: 194 STDV----VWGEKSEDDSANGWGTKADK--------AVD---TRWNKKDS-----QSLSD 313
+ WG+K+E D + WG K DK VD W KK Q
Sbjct: 1457 KAETDGGSSWGKKAETDGGSSWGKKVDKDGGSSLGKKVDKDGASWGKKVESENFPQLSGK 1516
Query: 314 QDYPSSTANWSKRSVEDSEDAWGKKAKNSGNDAQQSG---------PWLPKKVDGAAETP 466
++ S ++W K+ +D +WGKK + QSG W + DG +
Sbjct: 1517 EEQSGSWSSWGKQVEKDGGSSWGKKVDEPEKNLHQSGNGEQSGFVSSWGKVEKDGGS--- 1573
Query: 467 WNKN-----NSRPSTAGIL---GERLEEDSGDGWGKKVER 562
W K + + +G L G+++E D G WGKKV++
Sbjct: 1574 WGKKIESHQSGKGEESGSLSSWGKKVETDGGSSWGKKVDK 1613
Score = 79.3 bits (194), Expect = 7e-14
Identities = 57/181 (31%), Positives = 78/181 (43%), Gaps = 5/181 (2%)
Frame = +2
Query: 32 WGKRSEEDAGDGWSKVERSGDKAQQSGWGKKADE---ADWNKKDMQPLPDQAGLLNSSTD 202
WGK+ E D G W K G+ S WGKKA+ + W KK G TD
Sbjct: 1382 WGKKGETDGGSSWGK---KGETDGGSSWGKKAETDGGSSWGKKGETDGGSSWGK-KGETD 1437
Query: 203 --VVWGEKSEDDSANGWGTKADKAVDTRWNKKDSQSLSDQDYPSSTANWSKRSVEDSEDA 376
WGEK E D + WG KA+ + W KK ++ D SS W K+ +D +
Sbjct: 1438 GGSSWGEKPETDGGSSWGKKAETDGGSSWGKK-----AETDGGSS---WGKKVDKDGGSS 1489
Query: 377 WGKKAKNSGNDAQQSGPWLPKKVDGAAETPWNKNNSRPSTAGILGERLEEDSGDGWGKKV 556
GKK G W KKV+ + + + G+++E+D G WGKKV
Sbjct: 1490 LGKKVDKDG------ASW-GKKVESENFPQLSGKEEQSGSWSSWGKQVEKDGGSSWGKKV 1542
Query: 557 E 559
+
Sbjct: 1543 D 1543
Score = 77.4 bits (189), Expect = 3e-13
Identities = 58/217 (26%), Positives = 86/217 (39%), Gaps = 35/217 (16%)
Frame = +2
Query: 14 SSTVGG--WGKRSEEDAGDGWSKVERSGDKAQQSGWGKKADE--ADWNKK-DMQPLPDQA 178
+ T GG WGK++E D G W K DK S GKK D+ A W KK + + P +
Sbjct: 1458 AETDGGSSWGKKAETDGGSSWGK---KVDKDGGSSLGKKVDKDGASWGKKVESENFPQLS 1514
Query: 179 GLLNSSTD-VVWGEKSEDDSANGWGTKADKAVDT------------------------RW 283
G S WG++ E D + WG K D+ W
Sbjct: 1515 GKEEQSGSWSSWGKQVEKDGGSSWGKKVDEPEKNLHQSGNGEQSGFVSSWGKVEKDGGSW 1574
Query: 284 NKK-DSQSLSDQDYPSSTANWSKRSVEDSEDAWGKKAKNS----GNDAQQSGPWLPKKVD 448
KK +S + S ++W K+ D +WGKK G + G KK++
Sbjct: 1575 GKKIESHQSGKGEESGSLSSWGKKVETDGGSSWGKKVDKDSSSWGKKVDKDGGSWGKKIE 1634
Query: 449 GAAETPWNKNNSRPSTAGILGERLEEDSGDGWGKKVE 559
+ + + G+++E+D G WGKKV+
Sbjct: 1635 TENTPQLSGKEEQSGSLSSWGKKVEKDGGSSWGKKVD 1671
Score = 75.5 bits (184), Expect = 2e-12
Identities = 60/209 (28%), Positives = 89/209 (42%), Gaps = 30/209 (14%)
Frame = +2
Query: 14 SSTVGGWGKRSEEDAGDGWSK--------VERSGDKAQQ---SGWGK-KADEADWNKK-- 151
S + WGK+ E+D G W K + +SG+ Q S WGK + D W KK
Sbjct: 1520 SGSWSSWGKQVEKDGGSSWGKKVDEPEKNLHQSGNGEQSGFVSSWGKVEKDGGSWGKKIE 1579
Query: 152 -DMQPLPDQAGLLNSSTDVVWGEKSEDDSANGWGTKADKAVDT----------RWNKK-- 292
+++G L+S WG+K E D + WG K DK + W KK
Sbjct: 1580 SHQSGKGEESGSLSS-----WGKKVETDGGSSWGKKVDKDSSSWGKKVDKDGGSWGKKIE 1634
Query: 293 --DSQSLSDQDYPS-STANWSKRSVEDSEDAWGKKAKNSGNDAQQSGPWLPKKVDGAAET 463
++ LS ++ S S ++W K+ +D +WGKK N+ QQSG + +
Sbjct: 1635 TENTPQLSGKEEQSGSLSSWGKKVEKDGGSSWGKKVDEPENNRQQSG----SGEQSGSWS 1690
Query: 464 PWNKNNSRPSTAGILGERLEEDSGDGWGK 550
W K + G E + +S WGK
Sbjct: 1691 SWGKKVEK--DGGSWDEPKQLNSESSWGK 1717
Score = 68.6 bits (166), Expect = 4e-10
Identities = 59/200 (29%), Positives = 83/200 (41%), Gaps = 23/200 (11%)
Frame = +2
Query: 14 SSTVGGWGKRSEEDAGDGWSKVERSGDKAQQSGWGKKADE--ADWNKK-------DMQPL 166
S ++ WGK+ E D G W K DK S WGKK D+ W KK +
Sbjct: 1589 SGSLSSWGKKVETDGGSSWGK---KVDK-DSSSWGKKVDKDGGSWGKKIETENTPQLSGK 1644
Query: 167 PDQAGLLNSSTDVVWGEKSEDDSANGWGTKADKAVDTRWNKKDSQSLSDQDYPSSTANWS 346
+Q+G L+S WG+K E D + WG K D+ + R Q + S ++W
Sbjct: 1645 EEQSGSLSS-----WGKKVEKDGGSSWGKKVDEPENNR------QQSGSGEQSGSWSSWG 1693
Query: 347 KRSVED-----------SEDAWGKKAKNSG-NDAQQSGPWLPKKVDGAAETPWNKNNSRP 490
K+ +D SE +WGK G A G K++D + W+ + SR
Sbjct: 1694 KKVEKDGGSWDEPKQLNSESSWGKAPNGGGLGSATAEG---NKRLDQSV-NDWSSSVSRD 1749
Query: 491 STAGILGERLEEDS--GDGW 544
G L E +DS GW
Sbjct: 1750 ---GQLNEPTHDDSTKNGGW 1766
>XP_018632616.1 PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X4
[Nicotiana tomentosiformis]
Length = 2003
Score = 80.5 bits (197), Expect = 3e-14
Identities = 57/213 (26%), Positives = 91/213 (42%), Gaps = 30/213 (14%)
Frame = +2
Query: 14 SSTVGGWGKRSEEDAGDGWSKVERSGDKAQQSGWGKKADE-ADWNKKDMQPLPDQAGLLN 190
S ++ WGK+ E+D G +VE + + QSG +K+ + W KK +
Sbjct: 1491 SGSLSSWGKKVEKDGGSWGKRVEETENHNHQSGKDEKSGSLSSWGKK-----------VE 1539
Query: 191 SSTDVVWGEKSEDDSANGWGTKADKAVDTRWNKK-----------------DSQSLSDQD 319
WG+K E D + WG K +K + W KK SQ ++
Sbjct: 1540 IDGGSSWGKKVEIDGGSSWGKKVEKDGVSSWGKKVEKDGGSWGKKVEQAEIHSQQSGKEE 1599
Query: 320 YPSSTANWSKRSVEDSEDAWGKKAKNSGNDAQQSGPWLPKKVDGAAETPWN-----KNNS 484
S ++W K+ +D +WGK+ ++ G W KKV+ + W +N
Sbjct: 1600 KSESLSSWGKQVEKDGGSSWGKQ-------VEKGGSW-GKKVEKDGGSSWGEKVEAENTP 1651
Query: 485 RPSTAG-------ILGERLEEDSGDGWGKKVER 562
RPS G G++++ED G WG+KVE+
Sbjct: 1652 RPSGKGEQSGSWSSWGKQVKEDGGASWGEKVEK 1684
Score = 74.7 bits (182), Expect = 3e-12
Identities = 54/183 (29%), Positives = 83/183 (45%), Gaps = 2/183 (1%)
Frame = +2
Query: 23 VGGWGKRSEEDAGDGWSKVERSGDKAQQSGWGKKADE-ADWNKKDMQPLPDQAGLLNSST 199
V WGK+ E+D G KVE++ +QQSG +K++ + W K+ + G
Sbjct: 1567 VSSWGKKVEKDGGSWGKKVEQAEIHSQQSGKEEKSESLSSWGKQVEKDGGSSWG-KQVEK 1625
Query: 200 DVVWGEKSEDDSANGWGTKADKAVDTRWNKKDSQSLSDQDYPSSTANWSKRSVEDSEDAW 379
WG+K E D + WG K + R + K QS S ++W K+ ED +W
Sbjct: 1626 GGSWGKKVEKDGGSSWGEKVEAENTPRPSGKGEQS-------GSWSSWGKQVKEDGGASW 1678
Query: 380 GKKAKNSGNDAQQSGPWLPKKVDGAAETPWNK-NNSRPSTAGILGERLEEDSGDGWGKKV 556
G+K + G + W KKVD + P N +P + G+++E+D G G K
Sbjct: 1679 GEKVEKDGGSS-----W-GKKVDEPEDKPHQSGNGEQPGSWSSWGKKVEKDGGSWDGPKQ 1732
Query: 557 ERS 565
S
Sbjct: 1733 SNS 1735
Score = 68.6 bits (166), Expect = 4e-10
Identities = 44/154 (28%), Positives = 69/154 (44%), Gaps = 24/154 (15%)
Frame = +2
Query: 14 SSTVGGWGKRSEEDAGDGWSK-VERSGDKAQQSGWGKKADE---ADWNKK---DMQPLPD 172
S ++ WGK+ E+D G W K VE+ G WGKK ++ + W +K + P P
Sbjct: 1601 SESLSSWGKQVEKDGGSSWGKQVEKGGS------WGKKVEKDGGSSWGEKVEAENTPRPS 1654
Query: 173 QAGLLNSSTDVVWGEKSEDDSANGWGTKADKAVDTRWNKKDSQ------SLSDQDYPSST 334
G + S WG++ ++D WG K +K + W KK + + + P S
Sbjct: 1655 GKGEQSGSWSS-WGKQVKEDGGASWGEKVEKDGGSSWGKKVDEPEDKPHQSGNGEQPGSW 1713
Query: 335 ANWSKRSVED-----------SEDAWGKKAKNSG 403
++W K+ +D SE +WGK K G
Sbjct: 1714 SSWGKKVEKDGGSWDGPKQSNSESSWGKTTKGGG 1747
Score = 64.7 bits (156), Expect = 8e-09
Identities = 56/197 (28%), Positives = 88/197 (44%), Gaps = 20/197 (10%)
Frame = +2
Query: 32 WGKRSEED--AGDGW--SKVERSGDKAQQ-----SGWGKKADEADWNKKDMQPLPDQAG- 181
W K S E+ +G W +K + +KA S WG+K DEA+ N P Q+G
Sbjct: 1383 WEKASSENVKSGGSWDMAKTQNGAEKAVNQSDSWSSWGRKVDEAENN-------PRQSGN 1435
Query: 182 --LLNSSTDVVWGEKSEDDSANGW--GTKADKAVDTRWNKK------DSQSLSDQDYPSS 331
L S + WG K+++ +N G A + W KK + +++ S
Sbjct: 1436 GEQLESWS--AWGGKAKEVDSNPQQSGNTAQSGSWSAWGKKVDEAGNSPRQSGNEEQSGS 1493
Query: 332 TANWSKRSVEDSEDAWGKKAKNSGNDAQQSGPWLPKKVDGAAETPWNKNNSRPSTAGILG 511
++W K+ VE +WGK+ + + N QSG K + + W K + G
Sbjct: 1494 LSSWGKK-VEKDGGSWGKRVEETENHNHQSG----KDEKSGSLSSWGKKVEIDGGSS-WG 1547
Query: 512 ERLEEDSGDGWGKKVER 562
+++E D G WGKKVE+
Sbjct: 1548 KKVEIDGGSSWGKKVEK 1564
>XP_016557263.1 PREDICTED: DNA-directed RNA polymerase V subunit 1 [Capsicum annuum]
XP_016557264.1 PREDICTED: DNA-directed RNA polymerase V
subunit 1 [Capsicum annuum]
Length = 2007
Score = 79.7 bits (195), Expect = 5e-14
Identities = 70/217 (32%), Positives = 97/217 (44%), Gaps = 34/217 (15%)
Frame = +2
Query: 14 SSTVGGWGKRSEEDAGDGW-SKVERSGDKAQQSGWGKKADEAD-----WNKK--DMQPLP 169
S + WGK+SE D G W KV+ +G+ Q W + E + WNKK Q
Sbjct: 1423 SGSWSAWGKKSERDGGSSWGQKVDEAGNGEQSGSWSSRGKEVEKDGGSWNKKVESHQSWK 1482
Query: 170 DQAGLLNSSTDVVWGEKSEDDSANGWGTKAD-------KAVD---TRWNKK----DSQSL 307
++ +S T W +K+E D W K D K VD + W K +S L
Sbjct: 1483 EE----DSGTLPSWEKKAEKDGGGSWSKKVDGDGGSWSKKVDRDGSSWGNKGETENSPQL 1538
Query: 308 SDQDYPS-STANWSKRSVEDSEDAWGKKAKNSGNDAQQSGPWLP--KKV--DGAAETPWN 472
S+++ S S ++W K VE WGKK SG +QSG W KKV DG + WN
Sbjct: 1539 SEKEGQSKSWSSWGK-EVEKDGGFWGKKVSGSG---EQSGSWSSGGKKVEKDGGS---WN 1591
Query: 473 K-----NNSRPSTAGILG--ERLEEDSGDGWGKKVER 562
K + + +G L E+ E G W KKV++
Sbjct: 1592 KKVEIHQSGKEEVSGNLSSWEKKVEQDGGSWLKKVDK 1628
Score = 61.6 bits (148), Expect = 9e-08
Identities = 58/194 (29%), Positives = 83/194 (42%), Gaps = 10/194 (5%)
Frame = +2
Query: 14 SSTVGGWGKRSEEDAGDGWSKVERSGDKA-QQSGWGKKA--DEADWNKK---DMQPLPDQ 175
S + WGK E+D G KV SG+++ S GKK D WNKK +
Sbjct: 1545 SKSWSSWGKEVEKDGGFWGKKVSGSGEQSGSWSSGGKKVEKDGGSWNKKVEIHQSGKEEV 1604
Query: 176 AGLLNSSTDVVWGEKSEDDSANGWGTKADKAVDTRWNKKDSQ---SLSDQDYPS-STANW 343
+G L+S W +K E D + W K DK + NK ++Q LS ++ S S ++W
Sbjct: 1605 SGNLSS-----WEKKVEQDGGS-WLKKVDKDGGSWGNKVETQHSPQLSGKEEQSGSWSSW 1658
Query: 344 SKRSVEDSEDAWGKKAKNSGNDAQQSGPWLPKKVDGAAETPWNKNNSRPSTAGILGERLE 523
K +D +WGK N+ QSG +G W+ G++LE
Sbjct: 1659 RKPVEKDGGPSWGKNIDEPENNPNQSG-------NGELSGSWSSK----------GKKLE 1701
Query: 524 EDSGDGWGKKVERS 565
+D G G K S
Sbjct: 1702 KDGGSWDGPKQSNS 1715
>XP_018632629.1 PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X9
[Nicotiana tomentosiformis]
Length = 1979
Score = 79.3 bits (194), Expect = 7e-14
Identities = 56/201 (27%), Positives = 90/201 (44%), Gaps = 18/201 (8%)
Frame = +2
Query: 14 SSTVGGWGKRSEEDAGDGWSKVERSGDKAQQSGWGKKADEADWNKKDMQPLPDQAGLLNS 193
S ++ WGK+ E+D G WGK+ +E + N +++G L+S
Sbjct: 1491 SGSLSSWGKKVEKDGG----------------SWGKRVEETE-NHNHQSGKDEKSGSLSS 1533
Query: 194 STDVVWGEKSEDDSANGWGTKADKAVDTRWNKK------DSQSLSDQDYPSSTANWSKRS 355
WG+K E D + WG K +K + W KK SQ ++ S ++W K+
Sbjct: 1534 -----WGKKVEKDGVSSWGKKVEKDGGS-WGKKVEQAEIHSQQSGKEEKSESLSSWGKQV 1587
Query: 356 VEDSEDAWGKKAKNSGNDAQQSGPWLPKKVDGAAETPWN-----KNNSRPSTAG------ 502
+D +WGK+ ++ G W KKV+ + W +N RPS G
Sbjct: 1588 EKDGGSSWGKQ-------VEKGGSW-GKKVEKDGGSSWGEKVEAENTPRPSGKGEQSGSW 1639
Query: 503 -ILGERLEEDSGDGWGKKVER 562
G++++ED G WG+KVE+
Sbjct: 1640 SSWGKQVKEDGGASWGEKVEK 1660
Score = 74.7 bits (182), Expect = 3e-12
Identities = 54/183 (29%), Positives = 83/183 (45%), Gaps = 2/183 (1%)
Frame = +2
Query: 23 VGGWGKRSEEDAGDGWSKVERSGDKAQQSGWGKKADE-ADWNKKDMQPLPDQAGLLNSST 199
V WGK+ E+D G KVE++ +QQSG +K++ + W K+ + G
Sbjct: 1543 VSSWGKKVEKDGGSWGKKVEQAEIHSQQSGKEEKSESLSSWGKQVEKDGGSSWG-KQVEK 1601
Query: 200 DVVWGEKSEDDSANGWGTKADKAVDTRWNKKDSQSLSDQDYPSSTANWSKRSVEDSEDAW 379
WG+K E D + WG K + R + K QS S ++W K+ ED +W
Sbjct: 1602 GGSWGKKVEKDGGSSWGEKVEAENTPRPSGKGEQS-------GSWSSWGKQVKEDGGASW 1654
Query: 380 GKKAKNSGNDAQQSGPWLPKKVDGAAETPWNK-NNSRPSTAGILGERLEEDSGDGWGKKV 556
G+K + G + W KKVD + P N +P + G+++E+D G G K
Sbjct: 1655 GEKVEKDGGSS-----W-GKKVDEPEDKPHQSGNGEQPGSWSSWGKKVEKDGGSWDGPKQ 1708
Query: 557 ERS 565
S
Sbjct: 1709 SNS 1711
Score = 68.6 bits (166), Expect = 4e-10
Identities = 44/154 (28%), Positives = 69/154 (44%), Gaps = 24/154 (15%)
Frame = +2
Query: 14 SSTVGGWGKRSEEDAGDGWSK-VERSGDKAQQSGWGKKADE---ADWNKK---DMQPLPD 172
S ++ WGK+ E+D G W K VE+ G WGKK ++ + W +K + P P
Sbjct: 1577 SESLSSWGKQVEKDGGSSWGKQVEKGGS------WGKKVEKDGGSSWGEKVEAENTPRPS 1630
Query: 173 QAGLLNSSTDVVWGEKSEDDSANGWGTKADKAVDTRWNKKDSQ------SLSDQDYPSST 334
G + S WG++ ++D WG K +K + W KK + + + P S
Sbjct: 1631 GKGEQSGSWSS-WGKQVKEDGGASWGEKVEKDGGSSWGKKVDEPEDKPHQSGNGEQPGSW 1689
Query: 335 ANWSKRSVED-----------SEDAWGKKAKNSG 403
++W K+ +D SE +WGK K G
Sbjct: 1690 SSWGKKVEKDGGSWDGPKQSNSESSWGKTTKGGG 1723
Score = 65.9 bits (159), Expect = 3e-09
Identities = 56/227 (24%), Positives = 91/227 (40%), Gaps = 50/227 (22%)
Frame = +2
Query: 32 WGKRSEED--AGDGW--SKVERSGDKAQQ-----SGWGKKADEADWN------------- 145
W K S E+ +G W +K + +KA S WG+K DEA+ N
Sbjct: 1383 WEKASSENVKSGGSWDMAKTQNGAEKAVNQSDSWSSWGRKVDEAENNPRQSGNGEQLESW 1442
Query: 146 ------KKDMQPLPDQAG-LLNSSTDVVWGEK--------------SEDDSANGWGTKAD 262
K++ P Q+G S + WG+K + S + WG K +
Sbjct: 1443 SAWGGKAKEVDSNPQQSGNTAQSGSWSAWGKKVDEAGNSPRQSGNEEQSGSLSSWGKKVE 1502
Query: 263 KAVDTRWNKK-------DSQSLSDQDYPSSTANWSKRSVEDSEDAWGKKAKNSGNDAQQS 421
K + W K+ + QS D+ S ++W K+ +D +WGKK + G
Sbjct: 1503 KDGGS-WGKRVEETENHNHQSGKDEK-SGSLSSWGKKVEKDGVSSWGKKVEKDG------ 1554
Query: 422 GPWLPKKVDGAAETPWNKNNSRPSTAGILGERLEEDSGDGWGKKVER 562
G W K + + + + G+++E+D G WGK+VE+
Sbjct: 1555 GSWGKKVEQAEIHSQQSGKEEKSESLSSWGKQVEKDGGSSWGKQVEK 1601
>XP_012836426.1 PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X1
[Erythranthe guttata] EYU38281.1 hypothetical protein
MIMGU_mgv1a000048mg [Erythranthe guttata]
Length = 2113
Score = 78.6 bits (192), Expect = 1e-13
Identities = 65/194 (33%), Positives = 86/194 (44%), Gaps = 25/194 (12%)
Frame = +2
Query: 59 GDGWSKVERSGDKAQQSGWGKKAD-EADWNKK--------------DMQPLPDQAGLLNS 193
GDG+SK + S WGKK D E DW KK D L Q +
Sbjct: 1305 GDGFSKEGGKESEDSWSSWGKKVDTEDDWTKKAELTTWGKKVDREADDWILKGQKSKTDE 1364
Query: 194 STDVVWGEKSEDDSANGWGTKAD----------KAVDTRWNKKDSQSLSDQDYPSSTANW 343
WG+K E D A GWG K + +++D W K QS D+D + +A W
Sbjct: 1365 ENSSSWGKKVESD-AGGWGRKPEQSTGGSTGQTRSIDNDWTKAGQQSTFDEDAQTGSA-W 1422
Query: 344 SKRSVEDSEDAWGKKAKNSGNDAQQSGPWLPKKVDGAAETPWNKNNSRPSTAGILGERLE 523
K+ D+ WGK N +G W KKV+ A W K S AG G++++
Sbjct: 1423 GKKKESDA-GGWGK------NVESDAGGW-GKKVESDA-GGWGKKVE--SDAGGWGKQVD 1471
Query: 524 EDSGDGWGKKVERS 565
D+G GWGKK E+S
Sbjct: 1472 SDAG-GWGKKPEQS 1484
Score = 72.0 bits (175), Expect = 2e-11
Identities = 62/213 (29%), Positives = 95/213 (44%), Gaps = 28/213 (13%)
Frame = +2
Query: 11 ISSTVGGWGKRSEEDAGDGWSKVERSGDKAQQSGWGKK--ADEADWNKK-DMQPLPDQAG 181
+ S GGWGK+ E DAG GW K S GWGK+ +D W KK + P + A
Sbjct: 1437 VESDAGGWGKKVESDAG-GWGKKVES----DAGGWGKQVDSDAGGWGKKPEQSPRGNTAR 1491
Query: 182 LLNSSTDVVWGEKSEDD------------------SANGWGTKADKAVDTRWNKKDSQSL 307
+++ WG+K + +++ WG KA + W KKD QS
Sbjct: 1492 SVDNVNSPAWGKKVTSEGNEWTKAGEKSTSPEAAQNSSAWGKKAG-SDGGDWAKKDEQST 1550
Query: 308 --SDQDYPSSTANWSKRSVEDSEDAWG--KKAKNSGND-AQQSGP--WLPKKVDGAAETP 466
+ + + +W+K+ D + WG KKA + G D A++ P W K G+
Sbjct: 1551 WGNVKKAGFDSGDWAKK---DEQSTWGNVKKAGSDGGDWAKKDEPSTWGNAKKAGSDGGD 1607
Query: 467 WNKNNSRPSTAGILGERLEEDSGDGWGKKVERS 565
W K + + + + ++ D GD W KK E+S
Sbjct: 1608 WAKKDEQSTWGNV--KKAGSDGGD-WAKKDEQS 1637
Score = 66.2 bits (160), Expect = 2e-09
Identities = 61/195 (31%), Positives = 84/195 (43%), Gaps = 17/195 (8%)
Frame = +2
Query: 32 WGKRSEEDAGDGWSKVERSGDKAQQSGWGK----KADEADWNKKDMQPLPDQAGLLNSST 199
WGK+ E DAG GW G K +QS G ++ + DW K Q D+ ++ T
Sbjct: 1370 WGKKVESDAG-GW------GRKPEQSTGGSTGQTRSIDNDWTKAGQQSTFDE----DAQT 1418
Query: 200 DVVWGEKSEDDSANGWGTKADKAVDTRWNKKDSQSLS--DQDYPSSTANWSKRSVEDSED 373
WG+K E D A GWG + W KK + S W K+ V+
Sbjct: 1419 GSAWGKKKESD-AGGWGKNVESDAG-GWGKKVESDAGGWGKKVESDAGGWGKQ-VDSDAG 1475
Query: 374 AWGKKAKNS--GNDAQQ----SGPWLPKKV--DGAAETPWNKNNSRPSTA---GILGERL 520
WGKK + S GN A+ + P KKV +G T + ++ P A G++
Sbjct: 1476 GWGKKPEQSPRGNTARSVDNVNSPAWGKKVTSEGNEWTKAGEKSTSPEAAQNSSAWGKKA 1535
Query: 521 EEDSGDGWGKKVERS 565
D GD W KK E+S
Sbjct: 1536 GSDGGD-WAKKDEQS 1549
Score = 65.5 bits (158), Expect = 4e-09
Identities = 62/215 (28%), Positives = 89/215 (41%), Gaps = 30/215 (13%)
Frame = +2
Query: 11 ISSTVGGWGKRSEEDAG----------DGWSKVERSG----DKAQQSGWGKK--ADEADW 142
+ S GGWG++ E+ G + W+K + D S WGKK +D W
Sbjct: 1374 VESDAGGWGRKPEQSTGGSTGQTRSIDNDWTKAGQQSTFDEDAQTGSAWGKKKESDAGGW 1433
Query: 143 NKKDMQPLPDQAGLLNSSTDVVWGEKSEDDSANGWGTKADKAVDTRWNKKDSQSLSDQDY 322
K+++ G S WG+K E D A GWG + D W KK QS
Sbjct: 1434 G-KNVESDAGGWGKKVESDAGGWGKKVESD-AGGWGKQVDSDAG-GWGKKPEQSPRGN-- 1488
Query: 323 PSSTANWSKRSVED-SEDAWGKKAKNSGND-------------AQQSGPWLPKKVDGAAE 460
+ RSV++ + AWGKK + GN+ AQ S W K G+
Sbjct: 1489 -------TARSVDNVNSPAWGKKVTSEGNEWTKAGEKSTSPEAAQNSSAW--GKKAGSDG 1539
Query: 461 TPWNKNNSRPSTAGILGERLEEDSGDGWGKKVERS 565
W K + + + + ++ DSGD W KK E+S
Sbjct: 1540 GDWAKKDEQSTWGNV--KKAGFDSGD-WAKKDEQS 1571
Score = 62.4 bits (150), Expect = 5e-08
Identities = 55/194 (28%), Positives = 81/194 (41%), Gaps = 12/194 (6%)
Frame = +2
Query: 5 PLISSTVGGWGKRSEEDAGDGWSKVERSGDKAQQSGWG--KKA--DEADWNKKDMQPLPD 172
P + WGK++ D GD W+K K +QS WG KKA D DW KKD Q
Sbjct: 1522 PEAAQNSSAWGKKAGSDGGD-WAK------KDEQSTWGNVKKAGFDSGDWAKKDEQSTWG 1574
Query: 173 QAGLLNSSTDVVWGEKSEDDSANGWGTKADKAVD-TRWNKKDSQSL--SDQDYPSSTANW 343
S G+ ++ D + WG D W KKD QS + + S +W
Sbjct: 1575 NVKKAGSD----GGDWAKKDEPSTWGNAKKAGSDGGDWAKKDEQSTWGNVKKAGSDGGDW 1630
Query: 344 SKRSVEDSEDAWG--KKAKNSGND---AQQSGPWLPKKVDGAAETPWNKNNSRPSTAGIL 508
+K+ D + WG KKA + G D + W K G+ W K + + + +
Sbjct: 1631 AKK---DEQSTWGNVKKAGSDGGDWAKKDEQSTWGNVKKAGSDGGDWAKKDEQSTWGNVK 1687
Query: 509 GERLEEDSGDGWGK 550
+++ S WG+
Sbjct: 1688 ASQIQNKS--TWGR 1699
>XP_017225052.1 PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Daucus
carota subsp. sativus]
Length = 1989
Score = 77.8 bits (190), Expect = 2e-13
Identities = 68/232 (29%), Positives = 97/232 (41%), Gaps = 47/232 (20%)
Frame = +2
Query: 5 PLISSTVGGWG-------KRSEEDAGDGW-SKVERSGDKAQQSGWGKKADEADWNKKDMQ 160
P + V GW K S E++GD W SKVE Q+SGW KKA+ KK
Sbjct: 1225 PQVEVQVSGWDTMSDHHDKISNEESGDPWGSKVEIP----QESGWAKKAENG--KKKQEV 1278
Query: 161 PLPDQAGLLNSST-DVVWGEKSEDDSA--------NGWGTKADKAVDTRWNKKDSQSLSD 313
+ D G + D W EK+ D + +GW T D + WNK+D SL D
Sbjct: 1279 EIKDVWGEKKADKLDSAWSEKASDQAEMSGDIGQLSGWDTNRDGNASSNWNKRDMPSLPD 1338
Query: 314 QDYPSSTANWSKRSVEDS--------EDAWGKKAKNSG---ND----------------A 412
+ S N ++RS D+ DAWG N+G ND +
Sbjct: 1339 GNRNSVQCNKAERSRSDAWENVGKSQSDAWGNSDGNAGLCKNDKNDTSDWNKDSTKAGSS 1398
Query: 413 QQSG---PWLPKKVDGAAETPWNKNNSRPSTAGILGERLEEDSGDGWGKKVE 559
Q+SG PW K D E+ W+ ++P+ G++ +D W K ++
Sbjct: 1399 QKSGSSSPWYTKP-DQTDESQWSHKATQPAKQSEWGQK--DDESSNWNKGIQ 1447
Score = 63.9 bits (154), Expect = 1e-08
Identities = 55/194 (28%), Positives = 88/194 (45%), Gaps = 14/194 (7%)
Frame = +2
Query: 14 SSTVGGWGKRSEEDAGDGWSKVERSGDKAQQSGWGKKADEA-DWNKK---DMQPLPDQAG 181
S + W + ++ WS ++ A+QS WG+K DE+ +WNK D P P
Sbjct: 1401 SGSSSPWYTKPDQTDESQWS--HKATQPAKQSEWGQKDDESSNWNKGIQVDGTPEPGS-- 1456
Query: 182 LLNSSTDVVWGEKSEDDSANGWGTKADKAVDTRWNKKDSQ-----SLSDQDYPSSTANWS 346
WG KS G D+A ++W++KD+Q + +D ++NW
Sbjct: 1457 ---------WGVKSSSKQQPG-----DEADHSQWSQKDAQPDMQSQWTQKDDKVDSSNWD 1502
Query: 347 KRSVEDSED---AWGKKAKNSGNDAQQSGPWLPKKVDG--AAETPWNKNNSRPSTAGILG 511
K + D +WG K+ +S QQSG P+ ++ A ++ W+K +++P A LG
Sbjct: 1503 KDTQVDETPKPGSWGVKSSSS----QQSGSLSPRSMEPNKADDSQWSKKDTQPDRATGLG 1558
Query: 512 ERLEEDSGDGWGKK 553
S GW KK
Sbjct: 1559 ------SSSGWKKK 1566
>XP_018632623.1 PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X7
[Nicotiana tomentosiformis]
Length = 1991
Score = 77.8 bits (190), Expect = 2e-13
Identities = 56/212 (26%), Positives = 90/212 (42%), Gaps = 29/212 (13%)
Frame = +2
Query: 14 SSTVGGWGKRSEEDAGDGWSKVERSGDKAQQSGWGKKADEADWNKKDMQPLPDQAGLLNS 193
S ++ WGK+ E+D G WGK+ +E + N +++G L+S
Sbjct: 1491 SGSLSSWGKKVEKDGGS----------------WGKRVEETE-NHNHQSGKDEKSGSLSS 1533
Query: 194 STDVVWGEKSEDDSANGWGTKADKAVDTRWNKK-----------------DSQSLSDQDY 322
WG+K E D + WG K +K + W KK SQ ++
Sbjct: 1534 -----WGKKVEIDGGSSWGKKVEKDGVSSWGKKVEKDGGSWGKKVEQAEIHSQQSGKEEK 1588
Query: 323 PSSTANWSKRSVEDSEDAWGKKAKNSGNDAQQSGPWLPKKVDGAAETPWN-----KNNSR 487
S ++W K+ +D +WGK+ ++ G W KKV+ + W +N R
Sbjct: 1589 SESLSSWGKQVEKDGGSSWGKQ-------VEKGGSW-GKKVEKDGGSSWGEKVEAENTPR 1640
Query: 488 PSTAG-------ILGERLEEDSGDGWGKKVER 562
PS G G++++ED G WG+KVE+
Sbjct: 1641 PSGKGEQSGSWSSWGKQVKEDGGASWGEKVEK 1672
Score = 74.7 bits (182), Expect = 3e-12
Identities = 54/183 (29%), Positives = 83/183 (45%), Gaps = 2/183 (1%)
Frame = +2
Query: 23 VGGWGKRSEEDAGDGWSKVERSGDKAQQSGWGKKADE-ADWNKKDMQPLPDQAGLLNSST 199
V WGK+ E+D G KVE++ +QQSG +K++ + W K+ + G
Sbjct: 1555 VSSWGKKVEKDGGSWGKKVEQAEIHSQQSGKEEKSESLSSWGKQVEKDGGSSWG-KQVEK 1613
Query: 200 DVVWGEKSEDDSANGWGTKADKAVDTRWNKKDSQSLSDQDYPSSTANWSKRSVEDSEDAW 379
WG+K E D + WG K + R + K QS S ++W K+ ED +W
Sbjct: 1614 GGSWGKKVEKDGGSSWGEKVEAENTPRPSGKGEQS-------GSWSSWGKQVKEDGGASW 1666
Query: 380 GKKAKNSGNDAQQSGPWLPKKVDGAAETPWNK-NNSRPSTAGILGERLEEDSGDGWGKKV 556
G+K + G + W KKVD + P N +P + G+++E+D G G K
Sbjct: 1667 GEKVEKDGGSS-----W-GKKVDEPEDKPHQSGNGEQPGSWSSWGKKVEKDGGSWDGPKQ 1720
Query: 557 ERS 565
S
Sbjct: 1721 SNS 1723
Score = 68.6 bits (166), Expect = 4e-10
Identities = 44/154 (28%), Positives = 69/154 (44%), Gaps = 24/154 (15%)
Frame = +2
Query: 14 SSTVGGWGKRSEEDAGDGWSK-VERSGDKAQQSGWGKKADE---ADWNKK---DMQPLPD 172
S ++ WGK+ E+D G W K VE+ G WGKK ++ + W +K + P P
Sbjct: 1589 SESLSSWGKQVEKDGGSSWGKQVEKGGS------WGKKVEKDGGSSWGEKVEAENTPRPS 1642
Query: 173 QAGLLNSSTDVVWGEKSEDDSANGWGTKADKAVDTRWNKKDSQ------SLSDQDYPSST 334
G + S WG++ ++D WG K +K + W KK + + + P S
Sbjct: 1643 GKGEQSGSWSS-WGKQVKEDGGASWGEKVEKDGGSSWGKKVDEPEDKPHQSGNGEQPGSW 1701
Query: 335 ANWSKRSVED-----------SEDAWGKKAKNSG 403
++W K+ +D SE +WGK K G
Sbjct: 1702 SSWGKKVEKDGGSWDGPKQSNSESSWGKTTKGGG 1735
Score = 64.3 bits (155), Expect = 1e-08
Identities = 59/207 (28%), Positives = 94/207 (45%), Gaps = 29/207 (14%)
Frame = +2
Query: 32 WGKRSEED--AGDGW--SKVERSGDKAQQ-----SGWGKKADEADWNKKDMQPLPDQAG- 181
W K S E+ +G W +K + +KA S WG+K DEA+ N P Q+G
Sbjct: 1383 WEKASSENVKSGGSWDMAKTQNGAEKAVNQSDSWSSWGRKVDEAENN-------PRQSGN 1435
Query: 182 --LLNSSTDVVWGEKSEDDSANGW--GTKADKAVDTRWNKK------DSQSLSDQDYPSS 331
L S + WG K+++ +N G A + W KK + +++ S
Sbjct: 1436 GEQLESWS--AWGGKAKEVDSNPQQSGNTAQSGSWSAWGKKVDEAGNSPRQSGNEEQSGS 1493
Query: 332 TANWSKRSVEDSEDAWGKKAKNSGNDAQQSG---------PWLPKKVDGAAETPWNKNNS 484
++W K+ VE +WGK+ + + N QSG W KKV+ + W K
Sbjct: 1494 LSSWGKK-VEKDGGSWGKRVEETENHNHQSGKDEKSGSLSSW-GKKVEIDGGSSWGKKVE 1551
Query: 485 RPSTAGILGERLEEDSGDGWGKKVERS 565
+ + G+++E+D G WGKKVE++
Sbjct: 1552 KDGVSS-WGKKVEKDGG-SWGKKVEQA 1576
>XP_017257953.1 PREDICTED: DNA-directed RNA polymerase V subunit 1 [Daucus carota
subsp. sativus] KZM90293.1 hypothetical protein
DCAR_022342 [Daucus carota subsp. sativus]
Length = 2116
Score = 77.8 bits (190), Expect = 2e-13
Identities = 68/232 (29%), Positives = 97/232 (41%), Gaps = 47/232 (20%)
Frame = +2
Query: 5 PLISSTVGGWG-------KRSEEDAGDGW-SKVERSGDKAQQSGWGKKADEADWNKKDMQ 160
P + V GW K S E++GD W SKVE Q+SGW KKA+ KK
Sbjct: 1352 PQVEVQVSGWDTMSDHHDKISNEESGDPWGSKVEIP----QESGWAKKAENG--KKKQEV 1405
Query: 161 PLPDQAGLLNSST-DVVWGEKSEDDSA--------NGWGTKADKAVDTRWNKKDSQSLSD 313
+ D G + D W EK+ D + +GW T D + WNK+D SL D
Sbjct: 1406 EIKDVWGEKKADKLDSAWSEKASDQAEMSGDIGQLSGWDTNRDGNASSNWNKRDMPSLPD 1465
Query: 314 QDYPSSTANWSKRSVEDS--------EDAWGKKAKNSG---ND----------------A 412
+ S N ++RS D+ DAWG N+G ND +
Sbjct: 1466 GNRNSVQCNKAERSRSDAWENVGKSQSDAWGNSDGNAGLCKNDKNDTSDWNKDSTKAGSS 1525
Query: 413 QQSG---PWLPKKVDGAAETPWNKNNSRPSTAGILGERLEEDSGDGWGKKVE 559
Q+SG PW K D E+ W+ ++P+ G++ +D W K ++
Sbjct: 1526 QKSGSSSPWYTKP-DQTDESQWSHKATQPAKQSEWGQK--DDESSNWNKGIQ 1574
Score = 63.9 bits (154), Expect = 1e-08
Identities = 55/194 (28%), Positives = 88/194 (45%), Gaps = 14/194 (7%)
Frame = +2
Query: 14 SSTVGGWGKRSEEDAGDGWSKVERSGDKAQQSGWGKKADEA-DWNKK---DMQPLPDQAG 181
S + W + ++ WS ++ A+QS WG+K DE+ +WNK D P P
Sbjct: 1528 SGSSSPWYTKPDQTDESQWS--HKATQPAKQSEWGQKDDESSNWNKGIQVDGTPEPGS-- 1583
Query: 182 LLNSSTDVVWGEKSEDDSANGWGTKADKAVDTRWNKKDSQ-----SLSDQDYPSSTANWS 346
WG KS G D+A ++W++KD+Q + +D ++NW
Sbjct: 1584 ---------WGVKSSSKQQPG-----DEADHSQWSQKDAQPDMQSQWTQKDDKVDSSNWD 1629
Query: 347 KRSVEDSED---AWGKKAKNSGNDAQQSGPWLPKKVDG--AAETPWNKNNSRPSTAGILG 511
K + D +WG K+ +S QQSG P+ ++ A ++ W+K +++P A LG
Sbjct: 1630 KDTQVDETPKPGSWGVKSSSS----QQSGSLSPRSMEPNKADDSQWSKKDTQPDRATGLG 1685
Query: 512 ERLEEDSGDGWGKK 553
S GW KK
Sbjct: 1686 ------SSSGWKKK 1693